RNA–Protein interactions for RNA: ENST00000366516.5

SMYD3-201, Transcript of SET and MYND domain containing 3, humanhuman

TSL 1 (best)

Gene SMYD3, Length 1,863 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMYD3-201ENST00000366516 DEFB131BA0A096LNP1 70 aa5.8□□□□□ -1.48
SMYD3-201ENST00000366516 PSPHP1O15172 72 aa5.8□□□□□ -1.48
SMYD3-201ENST00000366516 LINC00208Q96KT6 92 aa5.8□□□□□ -1.48
SMYD3-201ENST00000366516 LRCOL1A6NCL2 159 aa5.79□□□□□ -1.48
SMYD3-201ENST00000366516 IGFL1Q6UW32 110 aa5.79□□□□□ -1.48
SMYD3-201ENST00000366516 LINC00588Q9Y4M8 146 aa5.79□□□□□ -1.48
SMYD3-201ENST00000366516 ANK3Q12955 4377 aaKnown RBP5.79□□□□□ -1.48
SMYD3-201ENST00000366516 H0Y9P7 68 aa5.79□□□□□ -1.48
SMYD3-201ENST00000366516 HIVEP2P31629 2446 aa5.78□□□□□ -1.48
SMYD3-201ENST00000366516 FAM168BA1KXE4 195 aa5.78□□□□□ -1.48
SMYD3-201ENST00000366516 CASC2Q6XLA1 102 aa5.78□□□□□ -1.48
SMYD3-201ENST00000366516 WFDC13Q8IUB5 93 aa5.78□□□□□ -1.48
SMYD3-201ENST00000366516 C11orf45Q8TAV5 145 aa5.78□□□□□ -1.48
SMYD3-201ENST00000366516 A0A087WSZ3 146 aa5.77□□□□□ -1.49
SMYD3-201ENST00000366516 KRTAP29-1A8MX34 341 aaPredicted RBP5.77□□□□□ -1.49
SMYD3-201ENST00000366516 CUBNO60494 3623 aa5.77□□□□□ -1.49
SMYD3-201ENST00000366516 INAFM1C9JVW0 142 aa5.77□□□□□ -1.49
SMYD3-201ENST00000366516 NBEAL2Q6ZNJ1 2754 aa5.76□□□□□ -1.49
SMYD3-201ENST00000366516 ANK2Q01484 3957 aa5.76□□□□□ -1.49
SMYD3-201ENST00000366516 A8MWP4 228 aa5.76□□□□□ -1.49
SMYD3-201ENST00000366516 PRR4Q16378 134 aa5.76□□□□□ -1.49
SMYD3-201ENST00000366516 A8MUN3 132 aa5.75□□□□□ -1.49
SMYD3-201ENST00000366516 Q5VV11 94 aa5.75□□□□□ -1.49
SMYD3-201ENST00000366516 CD164Q04900 197 aa5.75□□□□□ -1.49
SMYD3-201ENST00000366516 KRTAP7-1Q8IUC3 87 aa5.74□□□□□ -1.49
SMYD3-201ENST00000366516 Q8N9P0 234 aaPredicted RBP5.74□□□□□ -1.49
SMYD3-201ENST00000366516 RETNQ9HD89 108 aa5.74□□□□□ -1.49
SMYD3-201ENST00000366516 H0Y9J4 135 aa5.73□□□□□ -1.49
SMYD3-201ENST00000366516 CHKB-CPT1BH3BT56 60 aa5.73□□□□□ -1.49
SMYD3-201ENST00000366516 C16orf90A8MZG2 172 aa5.73□□□□□ -1.49
SMYD3-201ENST00000366516 SPRR1BP22528 89 aa5.73□□□□□ -1.49
SMYD3-201ENST00000366516 Q75L30 129 aa5.73□□□□□ -1.49
SMYD3-201ENST00000366516 C9orf163Q8N9P6 203 aa5.73□□□□□ -1.49
SMYD3-201ENST00000366516 TP53AIP1Q9HCN2 124 aa5.73□□□□□ -1.49
SMYD3-201ENST00000366516 ATP11AUNQ6ZP68 121 aa5.72□□□□□ -1.49
SMYD3-201ENST00000366516 PRR15LQ9BU68 103 aa5.71□□□□□ -1.5
SMYD3-201ENST00000366516 IGLV7-46A0A075B6I9 117 aa5.71□□□□□ -1.5
SMYD3-201ENST00000366516 LOC101927531A0A1B0GV80 90 aa5.71□□□□□ -1.5
SMYD3-201ENST00000366516 CNBPP62633 177 aaKnown RBP5.7□□□□□ -1.5
SMYD3-201ENST00000366516 DEFB116Q30KQ4 102 aa5.7□□□□□ -1.5
SMYD3-201ENST00000366516 KTN1-AS1Q86SY8 53 aa5.7□□□□□ -1.5
SMYD3-201ENST00000366516 NDUFS5O43920 106 aa5.69□□□□□ -1.5
SMYD3-201ENST00000366516 PRLHP81277 87 aa5.69□□□□□ -1.5
SMYD3-201ENST00000366516 MOBPQ13875 183 aa5.69□□□□□ -1.5
SMYD3-201ENST00000366516 LINC00472Q9H8W2 130 aa5.69□□□□□ -1.5
SMYD3-201ENST00000366516 C14orf177Q52M58 125 aa5.68□□□□□ -1.5
SMYD3-201ENST00000366516 COA5Q86WW8 74 aa5.68□□□□□ -1.5
SMYD3-201ENST00000366516 RPL37AP61513 92 aaKnown RBP5.68□□□□□ -1.5
SMYD3-201ENST00000366516 A6NED7 52 aa5.67□□□□□ -1.5
SMYD3-201ENST00000366516 CASC10Q5T4H9 136 aa5.66□□□□□ -1.5
SMYD3-201ENST00000366516 A0A096LNI7 61 aa5.66□□□□□ -1.5
SMYD3-201ENST00000366516 KRTAP10-11P60412 298 aa5.66□□□□□ -1.5
SMYD3-201ENST00000366516 CDC42SE1Q9NRR8 79 aa5.66□□□□□ -1.5
SMYD3-201ENST00000366516 MMP24-AS1A0A0U1RRL7 71 aa5.65□□□□□ -1.5
SMYD3-201ENST00000366516 PRB2P02812 416 aaPredicted RBP5.65□□□□□ -1.5
SMYD3-201ENST00000366516 KRTAP24-1Q3LI83 254 aa5.64□□□□□ -1.51
SMYD3-201ENST00000366516 MEGF8Q7Z7M0 2845 aa5.64□□□□□ -1.51
SMYD3-201ENST00000366516 A0A0G2JQZ4 141 aa5.64□□□□□ -1.51
SMYD3-201ENST00000366516 A0A1W2PNN7 141 aa5.64□□□□□ -1.51
SMYD3-201ENST00000366516 LINC01558Q9Y6Z2 57 aa5.64□□□□□ -1.51
SMYD3-201ENST00000366516 IGKV2-24A0A0C4DH68 120 aa5.63□□□□□ -1.51
SMYD3-201ENST00000366516 PHF5AQ7RTV0 110 aaKnown RBP5.63□□□□□ -1.51
SMYD3-201ENST00000366516 Q6ZR54 194 aa5.62□□□□□ -1.51
SMYD3-201ENST00000366516 SPTSSBQ8NFR3 76 aa5.62□□□□□ -1.51
SMYD3-201ENST00000366516 H3BS24 57 aa5.62□□□□□ -1.51
SMYD3-201ENST00000366516 ASB16-AS1Q495Z4 193 aa5.62□□□□□ -1.51
SMYD3-201ENST00000366516 TGP01266 2768 aa5.61□□□□□ -1.51
SMYD3-201ENST00000366516 VWFP04275 2813 aa5.61□□□□□ -1.51
SMYD3-201ENST00000366516 PKD1L1Q8TDX9 2849 aa5.61□□□□□ -1.51
SMYD3-201ENST00000366516 CDK2AP2O75956 126 aa5.6□□□□□ -1.51
SMYD3-201ENST00000366516 LCA10Q71F78 164 aa5.59□□□□□ -1.51
SMYD3-201ENST00000366516 A6NN06 94 aa5.58□□□□□ -1.52
SMYD3-201ENST00000366516 C8orf17Q9NRJ1 99 aa5.58□□□□□ -1.52
SMYD3-201ENST00000366516 PLAC8Q9NZF1 115 aa5.58□□□□□ -1.52
SMYD3-201ENST00000366516 ZNF706Q9Y5V0 76 aaPredicted RBP5.58□□□□□ -1.52
SMYD3-201ENST00000366516 C7orf65Q6ZTY9 151 aa5.58□□□□□ -1.52
SMYD3-201ENST00000366516 PCOTHQ58A44 107 aa5.57□□□□□ -1.52
SMYD3-201ENST00000366516 TENM1Q9UKZ4 2725 aa5.56□□□□□ -1.52
SMYD3-201ENST00000366516 A0A1B0GVX0 72 aa5.56□□□□□ -1.52
SMYD3-201ENST00000366516 A8MU10 97 aa5.56□□□□□ -1.52
SMYD3-201ENST00000366516 DNAH1Q9P2D7 4330 aa5.55□□□□□ -1.52
SMYD3-201ENST00000366516 MGAM2Q2M2H8 2515 aa5.55□□□□□ -1.52
SMYD3-201ENST00000366516 SPAG11AQ6PDA7 123 aa5.55□□□□□ -1.52
SMYD3-201ENST00000366516 Q96NJ1 140 aa5.55□□□□□ -1.52
SMYD3-201ENST00000366516 MRPL34Q9BQ48 92 aaKnown RBP5.55□□□□□ -1.52
SMYD3-201ENST00000366516 RBM12B-AS1Q9P1G2 102 aa5.55□□□□□ -1.52
SMYD3-201ENST00000366516 KRTAP13-1Q8IUC0 172 aa5.54□□□□□ -1.52
SMYD3-201ENST00000366516 LINC00483Q53H64 154 aa5.54□□□□□ -1.52
SMYD3-201ENST00000366516 UBE2DNLQ8IWF7 75 aa5.54□□□□□ -1.52
SMYD3-201ENST00000366516 TRRAPQ9Y4A5 3859 aa5.53□□□□□ -1.52
SMYD3-201ENST00000366516 IGHV6-1A0A0B4J1U7 121 aa5.51□□□□□ -1.53
SMYD3-201ENST00000366516 HRES1P13985 223 aa5.51□□□□□ -1.53
SMYD3-201ENST00000366516 IGLV9-49A0A0B4J1Y8 123 aa5.51□□□□□ -1.53
SMYD3-201ENST00000366516 CHTF8P0CG12 524 aa5.51□□□□□ -1.53
SMYD3-201ENST00000366516 KRTAP11-1Q8IUC1 163 aa5.5□□□□□ -1.53
SMYD3-201ENST00000366516 ACYP2P14621 99 aa5.49□□□□□ -1.53
SMYD3-201ENST00000366516 NOTCH1P46531 2555 aa5.49□□□□□ -1.53
SMYD3-201ENST00000366516 KRTAP1-5Q9BYS1 174 aa5.49□□□□□ -1.53
SMYD3-201ENST00000366516 PRKDCP78527 4128 aaKnown RBP5.49□□□□□ -1.53
SMYD3-201ENST00000366516 CMYA5Q8N3K9 4069 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms