RNA–Protein interactions for RNA: ENST00000363237.1

RNU6-1249P-201, Transcript of RNA, U6 small nuclear 1249, pseudogene, humanhuman

BASIC

Gene RNU6-1249P, Length 111 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1249P-201ENST00000363237 SMIM5Q71RC9 77 aa0.38□□□□□ -2.35
RNU6-1249P-201ENST00000363237 KNL1Q8NG31 2342 aa0.38□□□□□ -2.35
RNU6-1249P-201ENST00000363237 MAST1Q9Y2H9 1570 aa0.37□□□□□ -2.35
RNU6-1249P-201ENST00000363237 PKD1L1Q8TDX9 2849 aa0.37□□□□□ -2.35
RNU6-1249P-201ENST00000363237 IAPPP10997 89 aa0.37□□□□□ -2.35
RNU6-1249P-201ENST00000363237 SPTA1P02549 2419 aa0.37□□□□□ -2.35
RNU6-1249P-201ENST00000363237 ITSN2Q9NZM3 1697 aa0.37□□□□□ -2.35
RNU6-1249P-201ENST00000363237 K7EMI3 77 aa0.36□□□□□ -2.35
RNU6-1249P-201ENST00000363237 ATRQ13535 2644 aa0.36□□□□□ -2.35
RNU6-1249P-201ENST00000363237 HRNRQ86YZ3 2850 aaPredicted RBP0.36□□□□□ -2.35
RNU6-1249P-201ENST00000363237 FAT4Q6V0I7 4981 aa0.36□□□□□ -2.35
RNU6-1249P-201ENST00000363237 PTPN13Q12923 2485 aa0.35□□□□□ -2.35
RNU6-1249P-201ENST00000363237 CROCC2H7BZ55 1655 aa0.35□□□□□ -2.35
RNU6-1249P-201ENST00000363237 KMT2AQ03164 3969 aa0.35□□□□□ -2.35
RNU6-1249P-201ENST00000363237 H0YGG7 62 aa0.34□□□□□ -2.36
RNU6-1249P-201ENST00000363237 DEFB130BP0DP73 79 aa0.34□□□□□ -2.36
RNU6-1249P-201ENST00000363237 DEFB130AP0DP74 79 aa0.34□□□□□ -2.36
RNU6-1249P-201ENST00000363237 HIVEP3Q5T1R4 2406 aa0.34□□□□□ -2.36
RNU6-1249P-201ENST00000363237 SERF2P84101 59 aa0.33□□□□□ -2.36
RNU6-1249P-201ENST00000363237 NCBP2-AS2Q69YL0 99 aa0.33□□□□□ -2.36
RNU6-1249P-201ENST00000363237 PREX2Q70Z35 1606 aa0.33□□□□□ -2.36
RNU6-1249P-201ENST00000363237 PRXQ9BXM0 1461 aa0.33□□□□□ -2.36
RNU6-1249P-201ENST00000363237 EP300Q09472 2414 aaPredicted RBP0.33□□□□□ -2.36
RNU6-1249P-201ENST00000363237 MAST4O15021 2626 aa0.33□□□□□ -2.36
RNU6-1249P-201ENST00000363237 CELSR1Q9NYQ6 3014 aa0.32□□□□□ -2.36
RNU6-1249P-201ENST00000363237 LPAP08519 4548 aa0.32□□□□□ -2.36
RNU6-1249P-201ENST00000363237 ANKRD36CQ5JPF3 1778 aa0.32□□□□□ -2.36
RNU6-1249P-201ENST00000363237 PDE4DIPQ5VU43 2346 aa0.31□□□□□ -2.36
RNU6-1249P-201ENST00000363237 EEA1Q15075 1411 aa0.3□□□□□ -2.36
RNU6-1249P-201ENST00000363237 CDC42BPAQ5VT25 1732 aa0.3□□□□□ -2.36
RNU6-1249P-201ENST00000363237 CPS1P31327 1500 aa0.3□□□□□ -2.36
RNU6-1249P-201ENST00000363237 MINOS1Q5TGZ0 78 aa0.3□□□□□ -2.36
RNU6-1249P-201ENST00000363237 NMES1Q9C002 83 aa0.3□□□□□ -2.36
RNU6-1249P-201ENST00000363237 UGGT1Q9NYU2 1555 aa0.3□□□□□ -2.36
RNU6-1249P-201ENST00000363237 ALMS1Q8TCU4 4167 aa0.3□□□□□ -2.36
RNU6-1249P-201ENST00000363237 TOGARAM1Q9Y4F4 1720 aa0.3□□□□□ -2.36
RNU6-1249P-201ENST00000363237 UBR5O95071 2799 aaPredicted RBP0.29□□□□□ -2.36
RNU6-1249P-201ENST00000363237 CLASP1Q7Z460 1538 aa0.29□□□□□ -2.36
RNU6-1249P-201ENST00000363237 IGSF10Q6WRI0 2623 aa0.29□□□□□ -2.36
RNU6-1249P-201ENST00000363237 SPRR2BP35325 72 aa0.29□□□□□ -2.36
RNU6-1249P-201ENST00000363237 MUC5ACP98088 5654 aa0.29□□□□□ -2.36
RNU6-1249P-201ENST00000363237 MROH2AA6NES4 1674 aa0.29□□□□□ -2.36
RNU6-1249P-201ENST00000363237 MDN1Q9NU22 5596 aa0.29□□□□□ -2.36
RNU6-1249P-201ENST00000363237 TRANK1O15050 2925 aa0.28□□□□□ -2.36
RNU6-1249P-201ENST00000363237 CHD8Q9HCK8 2581 aa0.28□□□□□ -2.36
RNU6-1249P-201ENST00000363237 M0R1W7 72 aa0.28□□□□□ -2.36
RNU6-1249P-201ENST00000363237 SYCP2Q9BX26 1530 aa0.28□□□□□ -2.37
RNU6-1249P-201ENST00000363237 FCER1GP30273 86 aa0.27□□□□□ -2.37
RNU6-1249P-201ENST00000363237 C6orf48Q9UBA6 75 aa0.26□□□□□ -2.37
RNU6-1249P-201ENST00000363237 CACNA1AO00555 2505 aa0.25□□□□□ -2.37
RNU6-1249P-201ENST00000363237 PRLHP81277 87 aa0.25□□□□□ -2.37
RNU6-1249P-201ENST00000363237 WNK1Q9H4A3 2382 aa0.25□□□□□ -2.37
RNU6-1249P-201ENST00000363237 APC2O95996 2303 aa0.24□□□□□ -2.37
RNU6-1249P-201ENST00000363237 RPS27P42677 84 aaKnown RBP0.24□□□□□ -2.37
RNU6-1249P-201ENST00000363237 RPS27LQ71UM5 84 aaKnown RBP0.24□□□□□ -2.37
RNU6-1249P-201ENST00000363237 IGIPA6NJ69 53 aa0.23□□□□□ -2.37
RNU6-1249P-201ENST00000363237 WT1-ASQ06250 92 aa0.23□□□□□ -2.37
RNU6-1249P-201ENST00000363237 HMCN2Q8NDA2 5059 aa0.23□□□□□ -2.37
RNU6-1249P-201ENST00000363237 KMT2DO14686 5537 aa0.22□□□□□ -2.37
RNU6-1249P-201ENST00000363237 ACANP16112 2415 aa0.22□□□□□ -2.37
RNU6-1249P-201ENST00000363237 DEFB106AQ8N104 65 aa0.22□□□□□ -2.37
RNU6-1249P-201ENST00000363237 S4R3F8 94 aa0.22□□□□□ -2.37
RNU6-1249P-201ENST00000363237 ADCY10Q96PN6 1610 aa0.22□□□□□ -2.37
RNU6-1249P-201ENST00000363237 PCNX1Q96RV3 2341 aa0.21□□□□□ -2.38
RNU6-1249P-201ENST00000363237 HSPG2P98160 4391 aa0.2□□□□□ -2.38
RNU6-1249P-201ENST00000363237 DSPP15924 2871 aaKnown RBP0.19□□□□□ -2.38
RNU6-1249P-201ENST00000363237 TMEM167BQ9NRX6 74 aa0.19□□□□□ -2.38
RNU6-1249P-201ENST00000363237 A0A1B0GUL6 1792 aa0.19□□□□□ -2.38
RNU6-1249P-201ENST00000363237 HECTD4Q9Y4D8 3996 aa0.19□□□□□ -2.38
RNU6-1249P-201ENST00000363237 SETXQ7Z333 2677 aaKnown RBP0.19□□□□□ -2.38
RNU6-1249P-201ENST00000363237 AKAP13Q12802 2813 aa0.18□□□□□ -2.38
RNU6-1249P-201ENST00000363237 ABCA5Q8WWZ7 1642 aa0.18□□□□□ -2.38
RNU6-1249P-201ENST00000363237 LYSTQ99698 3801 aa0.18□□□□□ -2.38
RNU6-1249P-201ENST00000363237 MAP1BP46821 2468 aaKnown RBP0.18□□□□□ -2.38
RNU6-1249P-201ENST00000363237 C9orf92A6NGG3 77 aa0.17□□□□□ -2.38
RNU6-1249P-201ENST00000363237 H3BUA1 57 aa0.17□□□□□ -2.38
RNU6-1249P-201ENST00000363237 DMBT1Q9UGM3 2413 aaPredicted RBP0.17□□□□□ -2.38
RNU6-1249P-201ENST00000363237 COL7A1Q02388 2944 aa0.17□□□□□ -2.38
RNU6-1249P-201ENST00000363237 DCHS2Q6V1P9 2916 aa0.17□□□□□ -2.38
RNU6-1249P-201ENST00000363237 FLNBO75369 2602 aaKnown RBP0.17□□□□□ -2.38
RNU6-1249P-201ENST00000363237 TIMM8BQ9Y5J9 83 aaPredicted RBP0.16□□□□□ -2.38
RNU6-1249P-201ENST00000363237 PRRC2CQ9Y520 2896 aaKnown RBP0.16□□□□□ -2.38
RNU6-1249P-201ENST00000363237 TNRC18O15417 2968 aaPredicted RBP0.15□□□□□ -2.38
RNU6-1249P-201ENST00000363237 AGLP35573 1532 aa0.15□□□□□ -2.39
RNU6-1249P-201ENST00000363237 NBASA2RRP1 2371 aa0.15□□□□□ -2.39
RNU6-1249P-201ENST00000363237 H0YGX0 51 aa0.15□□□□□ -2.39
RNU6-1249P-201ENST00000363237 NRXN3Q9Y4C0 1643 aa0.15□□□□□ -2.39
RNU6-1249P-201ENST00000363237 FANCD2Q9BXW9 1451 aa0.14□□□□□ -2.39
RNU6-1249P-201ENST00000363237 FLNCQ14315 2725 aa0.13□□□□□ -2.39
RNU6-1249P-201ENST00000363237 SPRR2AP35326 72 aa0.13□□□□□ -2.39
RNU6-1249P-201ENST00000363237 LINC00308Q8TCZ7 52 aa0.13□□□□□ -2.39
RNU6-1249P-201ENST00000363237 SPRR2GQ9BYE4 73 aa0.13□□□□□ -2.39
RNU6-1249P-201ENST00000363237 ABCC8Q09428 1581 aa0.13□□□□□ -2.39
RNU6-1249P-201ENST00000363237 LMO7Q8WWI1 1683 aa0.13□□□□□ -2.39
RNU6-1249P-201ENST00000363237 LRP1BQ9NZR2 4599 aa0.13□□□□□ -2.39
RNU6-1249P-201ENST00000363237 NSD1Q96L73 2696 aaPredicted RBP0.12□□□□□ -2.39
RNU6-1249P-201ENST00000363237 H3BNG1 76 aa0.11□□□□□ -2.39
RNU6-1249P-201ENST00000363237 PLNP26678 52 aa0.11□□□□□ -2.39
RNU6-1249P-201ENST00000363237 EFCAB6Q5THR3 1501 aa0.11□□□□□ -2.39
RNU6-1249P-201ENST00000363237 COL6A3P12111 3177 aa0.1□□□□□ -2.39
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms