RNA–Protein interactions for RNA: ENST00000361439.8

NSMCE1-201, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NSMCE1, Length 1,067 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-201ENST00000361439 Q8NBF4 154 aa8.09□□□□□ -1.11
NSMCE1-201ENST00000361439 IGLV9-49A0A0B4J1Y8 123 aa8.08□□□□□ -1.12
NSMCE1-201ENST00000361439 DNAL4O96015 105 aa8.08□□□□□ -1.12
NSMCE1-201ENST00000361439 TRACP01848 142 aa8.08□□□□□ -1.12
NSMCE1-201ENST00000361439 LINC00304Q8N9R0 145 aa8.08□□□□□ -1.12
NSMCE1-201ENST00000361439 CLEC2BQ92478 149 aa8.08□□□□□ -1.12
NSMCE1-201ENST00000361439 LST1O00453 97 aa8.07□□□□□ -1.12
NSMCE1-201ENST00000361439 MOBPQ13875 183 aa8.07□□□□□ -1.12
NSMCE1-201ENST00000361439 C9orf153Q5TBE3 101 aa8.06□□□□□ -1.12
NSMCE1-201ENST00000361439 SNHG12Q9BXW3 62 aa8.06□□□□□ -1.12
NSMCE1-201ENST00000361439 F8WEM9 126 aa8.05□□□□□ -1.12
NSMCE1-201ENST00000361439 HERC1Q15751 4861 aa8.04□□□□□ -1.12
NSMCE1-201ENST00000361439 TRBV20-1A0A075B6N2 111 aa8.04□□□□□ -1.12
NSMCE1-201ENST00000361439 C9orf118A6NHY6 69 aa8.04□□□□□ -1.12
NSMCE1-201ENST00000361439 PCP4L1A6NKN8 68 aa8.04□□□□□ -1.12
NSMCE1-201ENST00000361439 TAX1BP3O14907 124 aa8.04□□□□□ -1.12
NSMCE1-201ENST00000361439 C4orf48Q5BLP8 95 aa8.04□□□□□ -1.12
NSMCE1-201ENST00000361439 COL5A1-AS1Q5SY13 56 aa8.04□□□□□ -1.12
NSMCE1-201ENST00000361439 ORMDL1Q9P0S3 153 aa8.04□□□□□ -1.12
NSMCE1-201ENST00000361439 IGLV8-61A0A075B6I0 122 aa8.03□□□□□ -1.12
NSMCE1-201ENST00000361439 TMEM256-PLSCR3K7ERE1 68 aa8.03□□□□□ -1.12
NSMCE1-201ENST00000361439 SPINK1P00995 79 aa8.03□□□□□ -1.12
NSMCE1-201ENST00000361439 RPS29P62273 56 aaKnown RBP8.03□□□□□ -1.12
NSMCE1-201ENST00000361439 ATXN8Q156A1 80 aa8.03□□□□□ -1.12
NSMCE1-201ENST00000361439 H3BUT2 72 aa8.02□□□□□ -1.13
NSMCE1-201ENST00000361439 Q6JHZ5 121 aa8.02□□□□□ -1.13
NSMCE1-201ENST00000361439 CD164Q04900 197 aa8.01□□□□□ -1.13
NSMCE1-201ENST00000361439 TCL1BO95988 128 aa8□□□□□ -1.13
NSMCE1-201ENST00000361439 NAA38Q9BRA0 125 aaKnown RBP8□□□□□ -1.13
NSMCE1-201ENST00000361439 A0A1W2PPM0 123 aa7.99□□□□□ -1.13
NSMCE1-201ENST00000361439 FABP2P12104 132 aa7.99□□□□□ -1.13
NSMCE1-201ENST00000361439 NDUFV3P56181 108 aaKnown RBP7.99□□□□□ -1.13
NSMCE1-201ENST00000361439 UBE2V1Q13404 147 aa7.98□□□□□ -1.13
NSMCE1-201ENST00000361439 H3BMG7 143 aa7.94□□□□□ -1.14
NSMCE1-201ENST00000361439 BAALC-AS2P0C853 105 aa7.94□□□□□ -1.14
NSMCE1-201ENST00000361439 Q5XG85 94 aa7.93□□□□□ -1.14
NSMCE1-201ENST00000361439 IGFL1Q6UW32 110 aa7.93□□□□□ -1.14
NSMCE1-201ENST00000361439 LIMD2Q9BT23 127 aa7.93□□□□□ -1.14
NSMCE1-201ENST00000361439 Q6Q795 121 aa7.91□□□□□ -1.14
NSMCE1-201ENST00000361439 ANKRD29Q8N6D5 301 aa7.91□□□□□ -1.14
NSMCE1-201ENST00000361439 SPCS1Q9Y6A9 102 aa7.9□□□□□ -1.14
NSMCE1-201ENST00000361439 C9JAW5 83 aa7.88□□□□□ -1.15
NSMCE1-201ENST00000361439 RBM3P98179 157 aaKnown RBP7.88□□□□□ -1.15
NSMCE1-201ENST00000361439 HRCT1Q6UXD1 115 aa7.88□□□□□ -1.15
NSMCE1-201ENST00000361439 FP248Q71RG6 208 aaPredicted RBP7.88□□□□□ -1.15
NSMCE1-201ENST00000361439 TEN1Q86WV5 123 aa7.88□□□□□ -1.15
NSMCE1-201ENST00000361439 HMCN2Q8NDA2 5059 aa7.87□□□□□ -1.15
NSMCE1-201ENST00000361439 JMJD7-PLA2G4BH0Y9G9 81 aa7.87□□□□□ -1.15
NSMCE1-201ENST00000361439 H3BT86 120 aa7.87□□□□□ -1.15
NSMCE1-201ENST00000361439 A0A0G2JQZ4 141 aa7.86□□□□□ -1.15
NSMCE1-201ENST00000361439 TRBV7-7A0A0K0K1E9 115 aa7.86□□□□□ -1.15
NSMCE1-201ENST00000361439 TRBV7-4A0A0J9YYF1 115 aa7.85□□□□□ -1.15
NSMCE1-201ENST00000361439 DSCR8Q96T75 97 aa7.85□□□□□ -1.15
NSMCE1-201ENST00000361439 K7EP34 96 aa7.84□□□□□ -1.15
NSMCE1-201ENST00000361439 PRR4Q16378 134 aa7.84□□□□□ -1.15
NSMCE1-201ENST00000361439 C21orf62-AS1Q17RA5 79 aa7.84□□□□□ -1.15
NSMCE1-201ENST00000361439 ASB16-AS1Q495Z4 193 aa7.84□□□□□ -1.15
NSMCE1-201ENST00000361439 GTF2H5Q6ZYL4 71 aa7.84□□□□□ -1.15
NSMCE1-201ENST00000361439 PDE6GP18545 87 aa7.83□□□□□ -1.16
NSMCE1-201ENST00000361439 SS18L2Q9UHA2 77 aa7.83□□□□□ -1.16
NSMCE1-201ENST00000361439 OBSCN-AS1Q96MR7 158 aa7.82□□□□□ -1.16
NSMCE1-201ENST00000361439 RETNLBQ9BQ08 111 aa7.82□□□□□ -1.16
NSMCE1-201ENST00000361439 LOC110117498A0A087WWA1 95 aa7.8□□□□□ -1.16
NSMCE1-201ENST00000361439 A0A1B0GW54 56 aa7.8□□□□□ -1.16
NSMCE1-201ENST00000361439 A0A1W2PNM2 257 aa7.8□□□□□ -1.16
NSMCE1-201ENST00000361439 IGLV7-46A0A075B6I9 117 aa7.79□□□□□ -1.16
NSMCE1-201ENST00000361439 CCKP06307 115 aa7.79□□□□□ -1.16
NSMCE1-201ENST00000361439 A0A1B0GV72 72 aa7.78□□□□□ -1.16
NSMCE1-201ENST00000361439 TPRXLQ17RH7 258 aa7.78□□□□□ -1.16
NSMCE1-201ENST00000361439 A0A087WSZ3 146 aa7.77□□□□□ -1.17
NSMCE1-201ENST00000361439 C1orf195Q5TG92 126 aa7.77□□□□□ -1.17
NSMCE1-201ENST00000361439 Q6ZQT0 140 aa7.76□□□□□ -1.17
NSMCE1-201ENST00000361439 PRO0461Q9UI25 63 aa7.76□□□□□ -1.17
NSMCE1-201ENST00000361439 F8W1H4 67 aa7.75□□□□□ -1.17
NSMCE1-201ENST00000361439 MTURNQ8N3F0 131 aa7.75□□□□□ -1.17
NSMCE1-201ENST00000361439 SMCPP49901 116 aaPredicted RBP7.73□□□□□ -1.17
NSMCE1-201ENST00000361439 C14orf132Q9NPU4 83 aa7.73□□□□□ -1.17
NSMCE1-201ENST00000361439 VPS25Q9BRG1 176 aa7.72□□□□□ -1.17
NSMCE1-201ENST00000361439 KRTAP13-3Q3SY46 172 aa7.7□□□□□ -1.18
NSMCE1-201ENST00000361439 LCE2DQ5TA82 110 aaPredicted RBP7.7□□□□□ -1.18
NSMCE1-201ENST00000361439 LRP2P98164 4655 aa7.68□□□□□ -1.18
NSMCE1-201ENST00000361439 Q96NJ1 140 aa7.67□□□□□ -1.18
NSMCE1-201ENST00000361439 CDIP1Q9H305 208 aa7.67□□□□□ -1.18
NSMCE1-201ENST00000361439 LINC00472Q9H8W2 130 aa7.66□□□□□ -1.18
NSMCE1-201ENST00000361439 LPAP08519 4548 aa7.66□□□□□ -1.18
NSMCE1-201ENST00000361439 A0A1B0GV90 55 aa7.64□□□□□ -1.19
NSMCE1-201ENST00000361439 UBR4Q5T4S7 5183 aa7.62□□□□□ -1.19
NSMCE1-201ENST00000361439 J3KT08 172 aa7.62□□□□□ -1.19
NSMCE1-201ENST00000361439 ETDBQ3ZM63 59 aa7.61□□□□□ -1.19
NSMCE1-201ENST00000361439 IGKV4-1P06312 121 aa7.6□□□□□ -1.19
NSMCE1-201ENST00000361439 NREPQ16612 68 aa7.6□□□□□ -1.19
NSMCE1-201ENST00000361439 XP32Q5T750 250 aa7.59□□□□□ -1.19
NSMCE1-201ENST00000361439 SIGMAR1Q99720 223 aa7.58□□□□□ -1.2
NSMCE1-201ENST00000361439 C9orf92A6NGG3 77 aa7.57□□□□□ -1.2
NSMCE1-201ENST00000361439 NDUFB1O75438 58 aa7.54□□□□□ -1.2
NSMCE1-201ENST00000361439 DEFB116Q30KQ4 102 aa7.54□□□□□ -1.2
NSMCE1-201ENST00000361439 SEC61BP60468 96 aaKnown RBP7.52□□□□□ -1.21
NSMCE1-201ENST00000361439 UBL5Q9BZL1 73 aa7.52□□□□□ -1.21
NSMCE1-201ENST00000361439 A0A1B0GVX0 72 aa7.51□□□□□ -1.21
NSMCE1-201ENST00000361439 A8MWP4 228 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 90.9 ms