RNA–Protein interactions for RNA: ENST00000360264.7

CUX1-203, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CUX1, Length 13,762 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-203ENST00000360264 C9orf92A6NGG3 77 aa6.34□□□□□ -1.39
CUX1-203ENST00000360264 A8MUN3 132 aa6.34□□□□□ -1.39
CUX1-203ENST00000360264 FREM2Q5SZK8 3169 aa6.34□□□□□ -1.39
CUX1-203ENST00000360264 BOD1L1Q8NFC6 3051 aa6.33□□□□□ -1.4
CUX1-203ENST00000360264 TENM4Q6N022 2769 aa6.33□□□□□ -1.4
CUX1-203ENST00000360264 TNRC18O15417 2968 aaPredicted RBP6.33□□□□□ -1.4
CUX1-203ENST00000360264 IGLV7-43P04211 117 aa6.33□□□□□ -1.4
CUX1-203ENST00000360264 LINC00483Q53H64 154 aa6.32□□□□□ -1.4
CUX1-203ENST00000360264 KTN1-AS1Q86SY8 53 aa6.32□□□□□ -1.4
CUX1-203ENST00000360264 WDFY4Q6ZS81 3184 aa6.32□□□□□ -1.4
CUX1-203ENST00000360264 KRTAP10-11P60412 298 aa6.32□□□□□ -1.4
CUX1-203ENST00000360264 Q6ZSA8 131 aa6.32□□□□□ -1.4
CUX1-203ENST00000360264 LINC00612Q8N6U2 182 aa6.31□□□□□ -1.4
CUX1-203ENST00000360264 Q8N377 158 aa6.31□□□□□ -1.4
CUX1-203ENST00000360264 SPRR4Q96PI1 79 aa6.31□□□□□ -1.4
CUX1-203ENST00000360264 ZNF575Q86XF7 245 aa6.31□□□□□ -1.4
CUX1-203ENST00000360264 PSORS1C2Q9UIG4 136 aa6.31□□□□□ -1.4
CUX1-203ENST00000360264 PDZD2O15018 2839 aa6.3□□□□□ -1.4
CUX1-203ENST00000360264 FAM104AQ969W3 186 aa6.29□□□□□ -1.4
CUX1-203ENST00000360264 PKD1L1Q8TDX9 2849 aa6.28□□□□□ -1.4
CUX1-203ENST00000360264 HTTP42858 3142 aa6.28□□□□□ -1.4
CUX1-203ENST00000360264 IGLV5-48A0A075B6I7 105 aa6.28□□□□□ -1.4
CUX1-203ENST00000360264 HRES1P13985 223 aa6.27□□□□□ -1.41
CUX1-203ENST00000360264 ZANQ9Y493 2812 aa6.27□□□□□ -1.41
CUX1-203ENST00000360264 PCNTO95613 3336 aa6.26□□□□□ -1.41
CUX1-203ENST00000360264 Q1T7F1 81 aa6.26□□□□□ -1.41
CUX1-203ENST00000360264 H7BZZ5 65 aa6.25□□□□□ -1.41
CUX1-203ENST00000360264 LINC01554Q52M75 96 aa6.24□□□□□ -1.41
CUX1-203ENST00000360264 DMXL1Q9Y485 3027 aa6.23□□□□□ -1.41
CUX1-203ENST00000360264 ATMQ13315 3056 aa6.23□□□□□ -1.41
CUX1-203ENST00000360264 GIG44P09565 113 aaPredicted RBP6.23□□□□□ -1.41
CUX1-203ENST00000360264 LCA10Q71F78 164 aa6.23□□□□□ -1.41
CUX1-203ENST00000360264 FAM229BQ4G0N7 80 aa6.22□□□□□ -1.41
CUX1-203ENST00000360264 IGLV7-46A0A075B6I9 117 aa6.21□□□□□ -1.42
CUX1-203ENST00000360264 A0A0D9SG42 100 aa6.21□□□□□ -1.42
CUX1-203ENST00000360264 CAMK2N1Q7Z7J9 78 aa6.2□□□□□ -1.42
CUX1-203ENST00000360264 A0A096LNT2 108 aa6.2□□□□□ -1.42
CUX1-203ENST00000360264 SMR3BP02814 79 aaPredicted RBP6.19□□□□□ -1.42
CUX1-203ENST00000360264 SRRM2Q9UQ35 2752 aaKnown RBP6.19□□□□□ -1.42
CUX1-203ENST00000360264 A0A1W2PNN7 141 aa6.19□□□□□ -1.42
CUX1-203ENST00000360264 ANAPC11Q9NYG5 84 aa6.18□□□□□ -1.42
CUX1-203ENST00000360264 M0R2T5 61 aa6.17□□□□□ -1.42
CUX1-203ENST00000360264 ADGRG4Q8IZF6 3080 aa6.17□□□□□ -1.42
CUX1-203ENST00000360264 FBN2P35556 2912 aa6.17□□□□□ -1.42
CUX1-203ENST00000360264 A0A1B0GU33 70 aa6.16□□□□□ -1.42
CUX1-203ENST00000360264 Q8N1X5 172 aa6.16□□□□□ -1.42
CUX1-203ENST00000360264 S4R3F8 94 aa6.15□□□□□ -1.43
CUX1-203ENST00000360264 CSAG1Q6PB30 78 aa6.14□□□□□ -1.43
CUX1-203ENST00000360264 VWFP04275 2813 aa6.14□□□□□ -1.43
CUX1-203ENST00000360264 ZCCHC13Q8WW36 166 aaKnown RBP6.13□□□□□ -1.43
CUX1-203ENST00000360264 PRR26Q8N8Z3 221 aa6.13□□□□□ -1.43
CUX1-203ENST00000360264 DMAC1Q96GE9 116 aa6.12□□□□□ -1.43
CUX1-203ENST00000360264 A0A1W2PNM2 257 aa6.12□□□□□ -1.43
CUX1-203ENST00000360264 CASC10Q5T4H9 136 aa6.11□□□□□ -1.43
CUX1-203ENST00000360264 EIF4EBP3O60516 100 aaPredicted RBP6.11□□□□□ -1.43
CUX1-203ENST00000360264 A0A0G2JQZ4 141 aa6.1□□□□□ -1.43
CUX1-203ENST00000360264 OCR1Q9BZK8 76 aa6.1□□□□□ -1.43
CUX1-203ENST00000360264 SEC61BP60468 96 aaKnown RBP6.1□□□□□ -1.43
CUX1-203ENST00000360264 Q75L30 129 aa6.1□□□□□ -1.43
CUX1-203ENST00000360264 CELSR1Q9NYQ6 3014 aa6.1□□□□□ -1.43
CUX1-203ENST00000360264 KRTAP10-3P60369 221 aa6.09□□□□□ -1.44
CUX1-203ENST00000360264 A0A0A0MQY5 61 aa6.07□□□□□ -1.44
CUX1-203ENST00000360264 WIPF1O43516 503 aa6.07□□□□□ -1.44
CUX1-203ENST00000360264 TNP2Q05952 138 aa6.07□□□□□ -1.44
CUX1-203ENST00000360264 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.05□□□□□ -1.44
CUX1-203ENST00000360264 RANBP2P49792 3224 aaKnown RBP6.05□□□□□ -1.44
CUX1-203ENST00000360264 KRTAP1-3Q8IUG1 177 aa6.05□□□□□ -1.44
CUX1-203ENST00000360264 TGP01266 2768 aa6.02□□□□□ -1.45
CUX1-203ENST00000360264 KRTAP1-1Q07627 177 aa6.01□□□□□ -1.45
CUX1-203ENST00000360264 PLAC8Q9NZF1 115 aa6.01□□□□□ -1.45
CUX1-203ENST00000360264 CFAP47Q6ZTR5 3102 aa6□□□□□ -1.45
CUX1-203ENST00000360264 MKI67P46013 3256 aaKnown RBP5.99□□□□□ -1.45
CUX1-203ENST00000360264 LINC01558Q9Y6Z2 57 aa5.99□□□□□ -1.45
CUX1-203ENST00000360264 R4GN34 69 aa5.96□□□□□ -1.46
CUX1-203ENST00000360264 FP248Q71RG6 208 aaPredicted RBP5.96□□□□□ -1.46
CUX1-203ENST00000360264 SPRR1AP35321 89 aa5.95□□□□□ -1.46
CUX1-203ENST00000360264 Q5W150 140 aa5.94□□□□□ -1.46
CUX1-203ENST00000360264 Q5VSD8 79 aa5.94□□□□□ -1.46
CUX1-203ENST00000360264 PLAC4Q8WY50 150 aa5.94□□□□□ -1.46
CUX1-203ENST00000360264 MXRA5Q9NR99 2828 aa5.94□□□□□ -1.46
CUX1-203ENST00000360264 MMP24-AS1A0A0U1RRL7 71 aa5.93□□□□□ -1.46
CUX1-203ENST00000360264 TENM2Q9NT68 2774 aa5.93□□□□□ -1.46
CUX1-203ENST00000360264 SPINK7P58062 85 aa5.93□□□□□ -1.46
CUX1-203ENST00000360264 RPL37P61927 97 aaKnown RBP5.92□□□□□ -1.46
CUX1-203ENST00000360264 OXTP01178 125 aa5.92□□□□□ -1.46
CUX1-203ENST00000360264 Q8N9P0 234 aaPredicted RBP5.91□□□□□ -1.46
CUX1-203ENST00000360264 COL6A3P12111 3177 aa5.9□□□□□ -1.47
CUX1-203ENST00000360264 SPRR1BP22528 89 aa5.9□□□□□ -1.47
CUX1-203ENST00000360264 LINC00472Q9H8W2 130 aa5.89□□□□□ -1.47
CUX1-203ENST00000360264 ASB16-AS1Q495Z4 193 aa5.89□□□□□ -1.47
CUX1-203ENST00000360264 ROMO1P60602 79 aa5.88□□□□□ -1.47
CUX1-203ENST00000360264 LCE6AA0A183 80 aa5.87□□□□□ -1.47
CUX1-203ENST00000360264 UTRNP46939 3433 aa5.86□□□□□ -1.47
CUX1-203ENST00000360264 CELSR3Q9NYQ7 3312 aa5.85□□□□□ -1.47
CUX1-203ENST00000360264 COL7A1Q02388 2944 aa5.84□□□□□ -1.47
CUX1-203ENST00000360264 Q5VV11 94 aa5.83□□□□□ -1.48
CUX1-203ENST00000360264 FBN1P35555 2871 aaKnown RBP5.83□□□□□ -1.48
CUX1-203ENST00000360264 M0QZ58 72 aa5.83□□□□□ -1.48
CUX1-203ENST00000360264 H3BS24 57 aa5.83□□□□□ -1.48
CUX1-203ENST00000360264 Q6ZR54 194 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms