RNA–Protein interactions for RNA: ENST00000358525.8

SLC6A20-202, Transcript of solute carrier family 6 member 20, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A20, Length 5,423 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A20-202ENST00000358525 DMXL2Q8TDJ6 3036 aa9.2□□□□□ -0.94
SLC6A20-202ENST00000358525 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.18□□□□□ -0.94
SLC6A20-202ENST00000358525 USP34Q70CQ2 3546 aa9.18□□□□□ -0.94
SLC6A20-202ENST00000358525 TNRC18O15417 2968 aaPredicted RBP9.18□□□□□ -0.94
SLC6A20-202ENST00000358525 LINC00336Q6ZUF6 198 aa9.18□□□□□ -0.94
SLC6A20-202ENST00000358525 TEP1Q99973 2627 aaKnown RBP9.17□□□□□ -0.94
SLC6A20-202ENST00000358525 SMR3BP02814 79 aaPredicted RBP9.16□□□□□ -0.94
SLC6A20-202ENST00000358525 LINC00304Q8N9R0 145 aa9.16□□□□□ -0.94
SLC6A20-202ENST00000358525 NBEAL2Q6ZNJ1 2754 aa9.16□□□□□ -0.94
SLC6A20-202ENST00000358525 ATP11AUNQ6ZP68 121 aa9.16□□□□□ -0.94
SLC6A20-202ENST00000358525 UNC79Q9P2D8 2635 aa9.16□□□□□ -0.94
SLC6A20-202ENST00000358525 MYO15AQ9UKN7 3530 aa9.15□□□□□ -0.94
SLC6A20-202ENST00000358525 KRTAP26-1Q6PEX3 210 aa9.15□□□□□ -0.94
SLC6A20-202ENST00000358525 SPRR1AP35321 89 aa9.14□□□□□ -0.95
SLC6A20-202ENST00000358525 SETXQ7Z333 2677 aaKnown RBP9.14□□□□□ -0.95
SLC6A20-202ENST00000358525 COL12A1Q99715 3063 aa9.14□□□□□ -0.95
SLC6A20-202ENST00000358525 CYP4F30PQ9H0H9 118 aa9.13□□□□□ -0.95
SLC6A20-202ENST00000358525 TNP2Q05952 138 aa9.13□□□□□ -0.95
SLC6A20-202ENST00000358525 CYSTM1Q9H1C7 97 aa9.13□□□□□ -0.95
SLC6A20-202ENST00000358525 C9orf92A6NGG3 77 aa9.12□□□□□ -0.95
SLC6A20-202ENST00000358525 FLNCQ14315 2725 aa9.12□□□□□ -0.95
SLC6A20-202ENST00000358525 SPANXA2-OT1Q8N9U9 137 aa9.09□□□□□ -0.95
SLC6A20-202ENST00000358525 KRTAP1-5Q9BYS1 174 aa9.09□□□□□ -0.95
SLC6A20-202ENST00000358525 ITPR1Q14643 2758 aa9.04□□□□□ -0.96
SLC6A20-202ENST00000358525 NOTCH1P46531 2555 aa9.04□□□□□ -0.96
SLC6A20-202ENST00000358525 DMXL1Q9Y485 3027 aa9.03□□□□□ -0.96
SLC6A20-202ENST00000358525 COL6A5A8TX70 2615 aa9.03□□□□□ -0.96
SLC6A20-202ENST00000358525 UBR5O95071 2799 aaPredicted RBP9.03□□□□□ -0.96
SLC6A20-202ENST00000358525 TACC2O95359 2948 aa9.03□□□□□ -0.96
SLC6A20-202ENST00000358525 UQCR11O14957 56 aa9.02□□□□□ -0.97
SLC6A20-202ENST00000358525 LOC400499M0QZD8 3231 aa9.01□□□□□ -0.97
SLC6A20-202ENST00000358525 CFAP47Q6ZTR5 3102 aa9□□□□□ -0.97
SLC6A20-202ENST00000358525 MMP24-AS1A0A0U1RRL7 71 aa8.99□□□□□ -0.97
SLC6A20-202ENST00000358525 PLAC8Q9NZF1 115 aa8.98□□□□□ -0.97
SLC6A20-202ENST00000358525 CD164Q04900 197 aa8.98□□□□□ -0.97
SLC6A20-202ENST00000358525 STAB1Q9NY15 2570 aa8.97□□□□□ -0.97
SLC6A20-202ENST00000358525 ZZEF1O43149 2961 aa8.96□□□□□ -0.97
SLC6A20-202ENST00000358525 MIR22HGQ0VDD5 57 aa8.96□□□□□ -0.97
SLC6A20-202ENST00000358525 Q8N1X5 172 aa8.96□□□□□ -0.97
SLC6A20-202ENST00000358525 UTP20O75691 2785 aaKnown RBP8.96□□□□□ -0.98
SLC6A20-202ENST00000358525 SPRR1BP22528 89 aa8.96□□□□□ -0.98
SLC6A20-202ENST00000358525 FAM229BQ4G0N7 80 aa8.95□□□□□ -0.98
SLC6A20-202ENST00000358525 PRR26Q8N8Z3 221 aa8.94□□□□□ -0.98
SLC6A20-202ENST00000358525 LINC00472Q9H8W2 130 aa8.94□□□□□ -0.98
SLC6A20-202ENST00000358525 Q1T7F1 81 aa8.94□□□□□ -0.98
SLC6A20-202ENST00000358525 IGLV7-46A0A075B6I9 117 aa8.93□□□□□ -0.98
SLC6A20-202ENST00000358525 Q5XG85 94 aa8.92□□□□□ -0.98
SLC6A20-202ENST00000358525 KRTAP4-16G5E9R7 235 aaPredicted RBP8.9□□□□□ -0.98
SLC6A20-202ENST00000358525 FP248Q71RG6 208 aaPredicted RBP8.88□□□□□ -0.99
SLC6A20-202ENST00000358525 HRES1P13985 223 aa8.87□□□□□ -0.99
SLC6A20-202ENST00000358525 NBEAL1Q6ZS30 2694 aa8.86□□□□□ -0.99
SLC6A20-202ENST00000358525 ITPR2Q14571 2701 aa8.85□□□□□ -0.99
SLC6A20-202ENST00000358525 HRNRQ86YZ3 2850 aaPredicted RBP8.85□□□□□ -0.99
SLC6A20-202ENST00000358525 PANO1I0J062 215 aa8.85□□□□□ -0.99
SLC6A20-202ENST00000358525 CDC42SE1Q9NRR8 79 aa8.85□□□□□ -0.99
SLC6A20-202ENST00000358525 Q8N9P0 234 aaPredicted RBP8.84□□□□□ -0.99
SLC6A20-202ENST00000358525 OXTP01178 125 aa8.83□□□□□ -1
SLC6A20-202ENST00000358525 J3QL48 77 aa8.83□□□□□ -1
SLC6A20-202ENST00000358525 ASH1LQ9NR48 2969 aaKnown RBP8.81□□□□□ -1
SLC6A20-202ENST00000358525 KTN1-AS1Q86SY8 53 aa8.8□□□□□ -1
SLC6A20-202ENST00000358525 ZANQ9Y493 2812 aa8.8□□□□□ -1
SLC6A20-202ENST00000358525 APCP25054 2843 aa8.78□□□□□ -1
SLC6A20-202ENST00000358525 WDFY3Q8IZQ1 3526 aa8.77□□□□□ -1
SLC6A20-202ENST00000358525 KRTAP10-2P60368 255 aa8.76□□□□□ -1.01
SLC6A20-202ENST00000358525 Q5W150 140 aa8.75□□□□□ -1.01
SLC6A20-202ENST00000358525 Q75L30 129 aa8.75□□□□□ -1.01
SLC6A20-202ENST00000358525 LINC00483Q53H64 154 aa8.75□□□□□ -1.01
SLC6A20-202ENST00000358525 KRTAP10-1P60331 282 aa8.74□□□□□ -1.01
SLC6A20-202ENST00000358525 KRTAP7-1Q8IUC3 87 aa8.73□□□□□ -1.01
SLC6A20-202ENST00000358525 KRTAP11-1Q8IUC1 163 aa8.72□□□□□ -1.01
SLC6A20-202ENST00000358525 LINC01558Q9Y6Z2 57 aa8.72□□□□□ -1.01
SLC6A20-202ENST00000358525 ZCCHC13Q8WW36 166 aaKnown RBP8.72□□□□□ -1.01
SLC6A20-202ENST00000358525 BAHCC1Q9P281 2608 aa8.72□□□□□ -1.01
SLC6A20-202ENST00000358525 NSD1Q96L73 2696 aaPredicted RBP8.71□□□□□ -1.02
SLC6A20-202ENST00000358525 A0A0D9SG42 100 aa8.7□□□□□ -1.02
SLC6A20-202ENST00000358525 COX6B2Q6YFQ2 88 aa8.7□□□□□ -1.02
SLC6A20-202ENST00000358525 HIVEP1P15822 2718 aa8.69□□□□□ -1.02
SLC6A20-202ENST00000358525 Q5VV11 94 aa8.69□□□□□ -1.02
SLC6A20-202ENST00000358525 KRTAP29-1A8MX34 341 aaPredicted RBP8.69□□□□□ -1.02
SLC6A20-202ENST00000358525 SPINT4Q6UDR6 99 aa8.69□□□□□ -1.02
SLC6A20-202ENST00000358525 RBM12B-AS1Q9P1G2 102 aa8.68□□□□□ -1.02
SLC6A20-202ENST00000358525 Q6ZR54 194 aa8.67□□□□□ -1.02
SLC6A20-202ENST00000358525 LCA10Q71F78 164 aa8.66□□□□□ -1.02
SLC6A20-202ENST00000358525 CELSR2Q9HCU4 2923 aa8.65□□□□□ -1.02
SLC6A20-202ENST00000358525 RELNP78509 3460 aa8.64□□□□□ -1.03
SLC6A20-202ENST00000358525 Q6ZRN7 208 aaPredicted RBP8.62□□□□□ -1.03
SLC6A20-202ENST00000358525 ZFHX4Q86UP3 3567 aa8.61□□□□□ -1.03
SLC6A20-202ENST00000358525 CRIPTQ9P021 101 aa8.61□□□□□ -1.03
SLC6A20-202ENST00000358525 A0A1B0GU33 70 aa8.6□□□□□ -1.03
SLC6A20-202ENST00000358525 CRYBG3Q68DQ2 2970 aa8.6□□□□□ -1.03
SLC6A20-202ENST00000358525 SPINK7P58062 85 aa8.6□□□□□ -1.03
SLC6A20-202ENST00000358525 LINC01554Q52M75 96 aa8.59□□□□□ -1.03
SLC6A20-202ENST00000358525 A0A087X002 238 aa8.59□□□□□ -1.03
SLC6A20-202ENST00000358525 FBN2P35556 2912 aa8.59□□□□□ -1.03
SLC6A20-202ENST00000358525 DMDP11532 3685 aa8.59□□□□□ -1.03
SLC6A20-202ENST00000358525 NIPBLQ6KC79 2804 aaeCLIP8.59□□□□□ -1.04
SLC6A20-202ENST00000358525 NOTCH2NLQ7Z3S9 236 aa8.58□□□□□ -1.04
SLC6A20-202ENST00000358525 ASPMQ8IZT6 3477 aa8.58□□□□□ -1.04
SLC6A20-202ENST00000358525 STAB2Q8WWQ8 2551 aa8.58□□□□□ -1.04
SLC6A20-202ENST00000358525 LAMA5O15230 3695 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 103 ms