RNA–Protein interactions for RNA: ENST00000357376.7

RTN4-203, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,110 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-203ENST00000357376 CHKB-CPT1BH3BT56 60 aa4.37□□□□□ -1.71
RTN4-203ENST00000357376 C1orf64Q8NEQ6 169 aa4.36□□□□□ -1.71
RTN4-203ENST00000357376 TENM3Q9P273 2699 aa4.36□□□□□ -1.71
RTN4-203ENST00000357376 K7EIL1 84 aa4.36□□□□□ -1.71
RTN4-203ENST00000357376 DSCR10P59022 87 aa4.36□□□□□ -1.71
RTN4-203ENST00000357376 PLA2G2DQ9UNK4 145 aa4.36□□□□□ -1.71
RTN4-203ENST00000357376 PRR15LQ9BU68 103 aa4.36□□□□□ -1.71
RTN4-203ENST00000357376 OTOGQ6ZRI0 2925 aa4.35□□□□□ -1.71
RTN4-203ENST00000357376 FAM229BQ4G0N7 80 aa4.35□□□□□ -1.71
RTN4-203ENST00000357376 FP248Q71RG6 208 aaPredicted RBP4.35□□□□□ -1.71
RTN4-203ENST00000357376 PDZD2O15018 2839 aa4.35□□□□□ -1.71
RTN4-203ENST00000357376 WIPF1O43516 503 aa4.35□□□□□ -1.71
RTN4-203ENST00000357376 A6NED7 52 aa4.34□□□□□ -1.71
RTN4-203ENST00000357376 V9GYY9 64 aa4.34□□□□□ -1.71
RTN4-203ENST00000357376 STAB2Q8WWQ8 2551 aa4.34□□□□□ -1.72
RTN4-203ENST00000357376 hDV103S1A0JD37 113 aa4.34□□□□□ -1.72
RTN4-203ENST00000357376 MDFIQ99750 246 aa4.33□□□□□ -1.72
RTN4-203ENST00000357376 FBN1P35555 2871 aaKnown RBP4.33□□□□□ -1.72
RTN4-203ENST00000357376 PKD1L1Q8TDX9 2849 aa4.33□□□□□ -1.72
RTN4-203ENST00000357376 IGLV5-37A0A075B6J1 123 aa4.33□□□□□ -1.72
RTN4-203ENST00000357376 MOBPQ13875 183 aa4.32□□□□□ -1.72
RTN4-203ENST00000357376 CIRBP-AS1Q8TBR5 109 aa4.32□□□□□ -1.72
RTN4-203ENST00000357376 SPRR4Q96PI1 79 aa4.32□□□□□ -1.72
RTN4-203ENST00000357376 ZNF469Q96JG9 3925 aaPredicted RBP4.32□□□□□ -1.72
RTN4-203ENST00000357376 SPRR1AP35321 89 aa4.32□□□□□ -1.72
RTN4-203ENST00000357376 A8MUN3 132 aa4.31□□□□□ -1.72
RTN4-203ENST00000357376 ZNF706Q9Y5V0 76 aaPredicted RBP4.31□□□□□ -1.72
RTN4-203ENST00000357376 TRAV22A0A0B4J277 110 aa4.31□□□□□ -1.72
RTN4-203ENST00000357376 A8MWP4 228 aa4.31□□□□□ -1.72
RTN4-203ENST00000357376 KMT2BQ9UMN6 2715 aaPredicted RBP4.31□□□□□ -1.72
RTN4-203ENST00000357376 PMAIP1Q13794 54 aa4.31□□□□□ -1.72
RTN4-203ENST00000357376 PRR15Q8IV56 129 aa4.31□□□□□ -1.72
RTN4-203ENST00000357376 NUPR2A6NF83 97 aa4.3□□□□□ -1.72
RTN4-203ENST00000357376 RETNLBQ9BQ08 111 aa4.3□□□□□ -1.72
RTN4-203ENST00000357376 NBDYA0A0U1RRE5 68 aa4.3□□□□□ -1.72
RTN4-203ENST00000357376 ANAPC11Q9NYG5 84 aa4.3□□□□□ -1.72
RTN4-203ENST00000357376 KRTAP1-5Q9BYS1 174 aa4.29□□□□□ -1.72
RTN4-203ENST00000357376 KRTAP4-16G5E9R7 235 aaPredicted RBP4.29□□□□□ -1.72
RTN4-203ENST00000357376 LY6G6CO95867 125 aa4.29□□□□□ -1.72
RTN4-203ENST00000357376 TNP2Q05952 138 aa4.28□□□□□ -1.72
RTN4-203ENST00000357376 IGLV5-52A0A0A0MRZ9 124 aa4.28□□□□□ -1.72
RTN4-203ENST00000357376 CNBPP62633 177 aaKnown RBP4.28□□□□□ -1.72
RTN4-203ENST00000357376 C9orf163Q8N9P6 203 aa4.28□□□□□ -1.72
RTN4-203ENST00000357376 TRRAPQ9Y4A5 3859 aa4.28□□□□□ -1.72
RTN4-203ENST00000357376 SPAG11AQ6PDA7 123 aa4.27□□□□□ -1.73
RTN4-203ENST00000357376 KRTAP7-1Q8IUC3 87 aa4.27□□□□□ -1.73
RTN4-203ENST00000357376 H3BPC8 53 aa4.26□□□□□ -1.73
RTN4-203ENST00000357376 LIMD2Q9BT23 127 aa4.26□□□□□ -1.73
RTN4-203ENST00000357376 RTL8CO15255 209 aa4.25□□□□□ -1.73
RTN4-203ENST00000357376 COA5Q86WW8 74 aa4.25□□□□□ -1.73
RTN4-203ENST00000357376 APLNQ9ULZ1 77 aa4.25□□□□□ -1.73
RTN4-203ENST00000357376 C4orf48Q5BLP8 95 aa4.24□□□□□ -1.73
RTN4-203ENST00000357376 TP53AIP1Q9HCN2 124 aa4.24□□□□□ -1.73
RTN4-203ENST00000357376 C8orf17Q9NRJ1 99 aa4.23□□□□□ -1.73
RTN4-203ENST00000357376 ANK3Q12955 4377 aaKnown RBP4.23□□□□□ -1.73
RTN4-203ENST00000357376 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.23□□□□□ -1.73
RTN4-203ENST00000357376 C1orf134Q5TEV5 83 aa4.23□□□□□ -1.73
RTN4-203ENST00000357376 KRTAP11-1Q8IUC1 163 aa4.22□□□□□ -1.73
RTN4-203ENST00000357376 MRPL34Q9BQ48 92 aaKnown RBP4.22□□□□□ -1.73
RTN4-203ENST00000357376 PSORS1C2Q9UIG4 136 aa4.22□□□□□ -1.73
RTN4-203ENST00000357376 AKAP9Q99996 3911 aa4.21□□□□□ -1.74
RTN4-203ENST00000357376 A0A087WTM6 91 aa4.21□□□□□ -1.74
RTN4-203ENST00000357376 A0A1B0GVX0 72 aa4.21□□□□□ -1.74
RTN4-203ENST00000357376 Q1T7F1 81 aa4.21□□□□□ -1.74
RTN4-203ENST00000357376 CYP4F30PQ9H0H9 118 aa4.21□□□□□ -1.74
RTN4-203ENST00000357376 PANO1I0J062 215 aa4.2□□□□□ -1.74
RTN4-203ENST00000357376 SEC61GP60059 68 aa4.2□□□□□ -1.74
RTN4-203ENST00000357376 LINC00472Q9H8W2 130 aa4.2□□□□□ -1.74
RTN4-203ENST00000357376 IGLV8-61A0A075B6I0 122 aa4.2□□□□□ -1.74
RTN4-203ENST00000357376 MMP24-AS1A0A0U1RRL7 71 aa4.19□□□□□ -1.74
RTN4-203ENST00000357376 ZNF861PO60384 105 aa4.19□□□□□ -1.74
RTN4-203ENST00000357376 SPANXA2-OT1Q8N9U9 137 aa4.19□□□□□ -1.74
RTN4-203ENST00000357376 ZCCHC13Q8WW36 166 aaKnown RBP4.19□□□□□ -1.74
RTN4-203ENST00000357376 IGKV2D-30A0A075B6S6 120 aa4.18□□□□□ -1.74
RTN4-203ENST00000357376 IGKV2-30P06310 120 aa4.18□□□□□ -1.74
RTN4-203ENST00000357376 SPACA4Q8TDM5 124 aa4.18□□□□□ -1.74
RTN4-203ENST00000357376 TENM2Q9NT68 2774 aa4.17□□□□□ -1.74
RTN4-203ENST00000357376 SPINK1P00995 79 aa4.17□□□□□ -1.74
RTN4-203ENST00000357376 SPRR1BP22528 89 aa4.17□□□□□ -1.74
RTN4-203ENST00000357376 KRTAP29-1A8MX34 341 aaPredicted RBP4.16□□□□□ -1.74
RTN4-203ENST00000357376 Q8N9P0 234 aaPredicted RBP4.16□□□□□ -1.74
RTN4-203ENST00000357376 LOC101927531A0A1B0GV80 90 aa4.15□□□□□ -1.74
RTN4-203ENST00000357376 LINC00313P59037 77 aa4.15□□□□□ -1.74
RTN4-203ENST00000357376 ACYP2P14621 99 aa4.15□□□□□ -1.75
RTN4-203ENST00000357376 CD164Q04900 197 aa4.15□□□□□ -1.75
RTN4-203ENST00000357376 LCE6AA0A183 80 aa4.14□□□□□ -1.75
RTN4-203ENST00000357376 PRR26Q8N8Z3 221 aa4.14□□□□□ -1.75
RTN4-203ENST00000357376 IGLV7-46A0A075B6I9 117 aa4.14□□□□□ -1.75
RTN4-203ENST00000357376 Q5VV11 94 aa4.14□□□□□ -1.75
RTN4-203ENST00000357376 SRRM2Q9UQ35 2752 aaKnown RBP4.14□□□□□ -1.75
RTN4-203ENST00000357376 IGLV7-43P04211 117 aa4.13□□□□□ -1.75
RTN4-203ENST00000357376 A0A1B0GU69 56 aa4.13□□□□□ -1.75
RTN4-203ENST00000357376 WWC2-AS2Q96NR7 200 aa4.11□□□□□ -1.75
RTN4-203ENST00000357376 C7orf65Q6ZTY9 151 aa4.11□□□□□ -1.75
RTN4-203ENST00000357376 A8MU10 97 aa4.1□□□□□ -1.75
RTN4-203ENST00000357376 A0A087X002 238 aa4.1□□□□□ -1.75
RTN4-203ENST00000357376 FAM229AH3BQW9 127 aa4.1□□□□□ -1.75
RTN4-203ENST00000357376 NOTCH2NLQ7Z3S9 236 aa4.1□□□□□ -1.75
RTN4-203ENST00000357376 C8orf87E5RJ46 101 aa4.09□□□□□ -1.75
RTN4-203ENST00000357376 HRES1P13985 223 aa4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 118.8 ms