RNA–Protein interactions for RNA: ENST00000355485.6

VANGL1-202, Transcript of VANGL planar cell polarity protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VANGL1, Length 8,691 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VANGL1-202ENST00000355485 LAMA2P24043 3122 aaKnown RBP4.93□□□□□ -1.62
VANGL1-202ENST00000355485 A8MU10 97 aa4.92□□□□□ -1.62
VANGL1-202ENST00000355485 KRTAP10-11P60412 298 aa4.92□□□□□ -1.62
VANGL1-202ENST00000355485 TRANK1O15050 2925 aa4.92□□□□□ -1.62
VANGL1-202ENST00000355485 MMP24-AS1A0A0U1RRL7 71 aa4.91□□□□□ -1.62
VANGL1-202ENST00000355485 LAMA3Q16787 3333 aa4.91□□□□□ -1.62
VANGL1-202ENST00000355485 UNC80Q8N2C7 3258 aa4.89□□□□□ -1.63
VANGL1-202ENST00000355485 ADM2Q7Z4H4 148 aa4.88□□□□□ -1.63
VANGL1-202ENST00000355485 XIRP2A4UGR9 3374 aa4.88□□□□□ -1.63
VANGL1-202ENST00000355485 M0QZ58 72 aa4.88□□□□□ -1.63
VANGL1-202ENST00000355485 DMBT1Q9UGM3 2413 aaPredicted RBP4.87□□□□□ -1.63
VANGL1-202ENST00000355485 ZCCHC13Q8WW36 166 aaKnown RBP4.87□□□□□ -1.63
VANGL1-202ENST00000355485 A6NN06 94 aa4.84□□□□□ -1.64
VANGL1-202ENST00000355485 RANBP2P49792 3224 aaKnown RBP4.83□□□□□ -1.64
VANGL1-202ENST00000355485 MGAM2Q2M2H8 2515 aa4.82□□□□□ -1.64
VANGL1-202ENST00000355485 MKI67P46013 3256 aaKnown RBP4.82□□□□□ -1.64
VANGL1-202ENST00000355485 STAB1Q9NY15 2570 aa4.81□□□□□ -1.64
VANGL1-202ENST00000355485 Q5W150 140 aa4.81□□□□□ -1.64
VANGL1-202ENST00000355485 HECTD1Q9ULT8 2610 aa4.81□□□□□ -1.64
VANGL1-202ENST00000355485 P0C880 135 aa4.81□□□□□ -1.64
VANGL1-202ENST00000355485 C5orf42Q9H799 3197 aa4.8□□□□□ -1.64
VANGL1-202ENST00000355485 A0A087X002 238 aa4.8□□□□□ -1.64
VANGL1-202ENST00000355485 MAST4O15021 2626 aa4.79□□□□□ -1.64
VANGL1-202ENST00000355485 SPATA8Q6RVD6 105 aa4.78□□□□□ -1.64
VANGL1-202ENST00000355485 CDH23Q9H251 3354 aa4.78□□□□□ -1.64
VANGL1-202ENST00000355485 KRTAP26-1Q6PEX3 210 aa4.78□□□□□ -1.64
VANGL1-202ENST00000355485 LINC00472Q9H8W2 130 aa4.77□□□□□ -1.65
VANGL1-202ENST00000355485 REV3LO60673 3130 aa4.77□□□□□ -1.65
VANGL1-202ENST00000355485 ROMO1P60602 79 aa4.77□□□□□ -1.65
VANGL1-202ENST00000355485 LCE6AA0A183 80 aa4.77□□□□□ -1.65
VANGL1-202ENST00000355485 RPL37P61927 97 aaKnown RBP4.77□□□□□ -1.65
VANGL1-202ENST00000355485 VCANP13611 3396 aa4.76□□□□□ -1.65
VANGL1-202ENST00000355485 C20orf166-AS1Q96NR2 134 aa4.76□□□□□ -1.65
VANGL1-202ENST00000355485 DNAH14Q0VDD8 3507 aa4.75□□□□□ -1.65
VANGL1-202ENST00000355485 CFAP46Q8IYW2 2715 aa4.75□□□□□ -1.65
VANGL1-202ENST00000355485 SPRR1AP35321 89 aa4.75□□□□□ -1.65
VANGL1-202ENST00000355485 SPRR1BP22528 89 aa4.74□□□□□ -1.65
VANGL1-202ENST00000355485 ATRQ13535 2644 aa4.74□□□□□ -1.65
VANGL1-202ENST00000355485 PRRC2CQ9Y520 2896 aaKnown RBP4.73□□□□□ -1.65
VANGL1-202ENST00000355485 KRTAP16-1A8MUX0 517 aa4.72□□□□□ -1.65
VANGL1-202ENST00000355485 PLAC8Q9NZF1 115 aa4.72□□□□□ -1.65
VANGL1-202ENST00000355485 KRTAP25-1Q3LHN0 102 aa4.71□□□□□ -1.66
VANGL1-202ENST00000355485 FLNBO75369 2602 aaKnown RBP4.71□□□□□ -1.66
VANGL1-202ENST00000355485 SZT2Q5T011 3432 aa4.7□□□□□ -1.66
VANGL1-202ENST00000355485 KRTAP29-1A8MX34 341 aaPredicted RBP4.7□□□□□ -1.66
VANGL1-202ENST00000355485 NOTCH2NLQ7Z3S9 236 aa4.69□□□□□ -1.66
VANGL1-202ENST00000355485 SPTBN5Q9NRC6 3674 aaKnown RBP4.68□□□□□ -1.66
VANGL1-202ENST00000355485 CFAP54Q96N23 3096 aa4.68□□□□□ -1.66
VANGL1-202ENST00000355485 NDUFAF8A1L188 74 aa4.68□□□□□ -1.66
VANGL1-202ENST00000355485 TRIOO75962 3097 aa4.67□□□□□ -1.66
VANGL1-202ENST00000355485 Q6ZR54 194 aa4.67□□□□□ -1.66
VANGL1-202ENST00000355485 SPEGQ15772 3267 aa4.65□□□□□ -1.66
VANGL1-202ENST00000355485 KRTAP1-3Q8IUG1 177 aa4.65□□□□□ -1.67
VANGL1-202ENST00000355485 FLNAP21333 2647 aaKnown RBP4.65□□□□□ -1.67
VANGL1-202ENST00000355485 CENPEQ02224 2701 aa4.65□□□□□ -1.67
VANGL1-202ENST00000355485 NBEAQ8NFP9 2946 aa4.63□□□□□ -1.67
VANGL1-202ENST00000355485 MYO15AQ9UKN7 3530 aa4.63□□□□□ -1.67
VANGL1-202ENST00000355485 LAMA1P25391 3075 aa4.62□□□□□ -1.67
VANGL1-202ENST00000355485 TNP1P09430 55 aa4.62□□□□□ -1.67
VANGL1-202ENST00000355485 STAB2Q8WWQ8 2551 aa4.62□□□□□ -1.67
VANGL1-202ENST00000355485 NBEAL1Q6ZS30 2694 aa4.61□□□□□ -1.67
VANGL1-202ENST00000355485 PRO2289Q9P1D8 64 aa4.6□□□□□ -1.67
VANGL1-202ENST00000355485 USP34Q70CQ2 3546 aa4.6□□□□□ -1.67
VANGL1-202ENST00000355485 NOTCH1P46531 2555 aa4.6□□□□□ -1.67
VANGL1-202ENST00000355485 PANO1I0J062 215 aa4.6□□□□□ -1.67
VANGL1-202ENST00000355485 KRTAP1-1Q07627 177 aa4.6□□□□□ -1.67
VANGL1-202ENST00000355485 KRTAP4-16G5E9R7 235 aaPredicted RBP4.59□□□□□ -1.67
VANGL1-202ENST00000355485 A8MUU9 505 aa4.58□□□□□ -1.68
VANGL1-202ENST00000355485 KRTAP11-1Q8IUC1 163 aa4.57□□□□□ -1.68
VANGL1-202ENST00000355485 KRTAP1-5Q9BYS1 174 aa4.57□□□□□ -1.68
VANGL1-202ENST00000355485 AKAP13Q12802 2813 aa4.57□□□□□ -1.68
VANGL1-202ENST00000355485 ITPR3Q14573 2671 aa4.55□□□□□ -1.68
VANGL1-202ENST00000355485 HELZ2Q9BYK8 2649 aaKnown RBP4.55□□□□□ -1.68
VANGL1-202ENST00000355485 ZNF292O60281 2723 aa4.54□□□□□ -1.68
VANGL1-202ENST00000355485 BAHCC1Q9P281 2608 aa4.54□□□□□ -1.68
VANGL1-202ENST00000355485 KRTAP7-1Q8IUC3 87 aa4.53□□□□□ -1.68
VANGL1-202ENST00000355485 FRYLO94915 3013 aa4.53□□□□□ -1.68
VANGL1-202ENST00000355485 EYSQ5T1H1 3165 aa4.52□□□□□ -1.69
VANGL1-202ENST00000355485 WDFY3Q8IZQ1 3526 aa4.52□□□□□ -1.69
VANGL1-202ENST00000355485 FRYQ5TBA9 3013 aa4.51□□□□□ -1.69
VANGL1-202ENST00000355485 RPS29P62273 56 aaKnown RBP4.51□□□□□ -1.69
VANGL1-202ENST00000355485 FREM2Q5SZK8 3169 aa4.51□□□□□ -1.69
VANGL1-202ENST00000355485 C10orf95Q9H7T3 257 aa4.5□□□□□ -1.69
VANGL1-202ENST00000355485 PRUNE2Q8WUY3 3088 aa4.49□□□□□ -1.69
VANGL1-202ENST00000355485 KRTAP10-1P60331 282 aa4.49□□□□□ -1.69
VANGL1-202ENST00000355485 UNC79Q9P2D8 2635 aa4.49□□□□□ -1.69
VANGL1-202ENST00000355485 GCN1Q92616 2671 aaKnown RBP4.48□□□□□ -1.69
VANGL1-202ENST00000355485 DSPP15924 2871 aaKnown RBP4.48□□□□□ -1.69
VANGL1-202ENST00000355485 KMT2BQ9UMN6 2715 aaPredicted RBP4.48□□□□□ -1.69
VANGL1-202ENST00000355485 SETXQ7Z333 2677 aaKnown RBP4.46□□□□□ -1.7
VANGL1-202ENST00000355485 PP632Q6XCG6 107 aa4.45□□□□□ -1.7
VANGL1-202ENST00000355485 KRTAP10-8P60410 259 aa4.45□□□□□ -1.7
VANGL1-202ENST00000355485 KRTAP10-2P60368 255 aa4.44□□□□□ -1.7
VANGL1-202ENST00000355485 VPS13AQ96RL7 3174 aa4.43□□□□□ -1.7
VANGL1-202ENST00000355485 CELSR3Q9NYQ7 3312 aa4.43□□□□□ -1.7
VANGL1-202ENST00000355485 DMDP11532 3685 aa4.42□□□□□ -1.7
VANGL1-202ENST00000355485 CHD6Q8TD26 2715 aa4.39□□□□□ -1.71
VANGL1-202ENST00000355485 COL6A5A8TX70 2615 aa4.38□□□□□ -1.71
VANGL1-202ENST00000355485 SPENQ96T58 3664 aaKnown RBP4.37□□□□□ -1.71
VANGL1-202ENST00000355485 IGSF10Q6WRI0 2623 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 90.2 ms