RNA–Protein interactions for RNA: ENST00000355072.9

HTT-201, Transcript of huntingtin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HTT, Length 13,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-201ENST00000355072 SPRR1BP22528 89 aa5.11□□□□□ -1.59
HTT-201ENST00000355072 FAM168BA1KXE4 195 aa5.1□□□□□ -1.59
HTT-201ENST00000355072 C19orf73Q9NVV2 129 aa5.1□□□□□ -1.59
HTT-201ENST00000355072 SPRR1AP35321 89 aa5.09□□□□□ -1.59
HTT-201ENST00000355072 RPL37P61927 97 aaKnown RBP5.09□□□□□ -1.59
HTT-201ENST00000355072 LINC00472Q9H8W2 130 aa5.09□□□□□ -1.59
HTT-201ENST00000355072 SEC61BP60468 96 aaKnown RBP5.08□□□□□ -1.6
HTT-201ENST00000355072 RPS29P62273 56 aaKnown RBP5.08□□□□□ -1.6
HTT-201ENST00000355072 C5orf42Q9H799 3197 aa5.08□□□□□ -1.6
HTT-201ENST00000355072 A0A1W2PPR1 153 aa5.07□□□□□ -1.6
HTT-201ENST00000355072 VPS13AQ96RL7 3174 aa5.06□□□□□ -1.6
HTT-201ENST00000355072 SPATA8Q6RVD6 105 aa5.06□□□□□ -1.6
HTT-201ENST00000355072 WWC2-AS2Q96NR7 200 aa5.06□□□□□ -1.6
HTT-201ENST00000355072 GIG44P09565 113 aaPredicted RBP5.06□□□□□ -1.6
HTT-201ENST00000355072 CSAG1Q6PB30 78 aa5.05□□□□□ -1.6
HTT-201ENST00000355072 LCE6AA0A183 80 aa5.04□□□□□ -1.6
HTT-201ENST00000355072 ZCCHC13Q8WW36 166 aaKnown RBP5.04□□□□□ -1.6
HTT-201ENST00000355072 DSPP15924 2871 aaKnown RBP5.04□□□□□ -1.6
HTT-201ENST00000355072 MMP24-AS1A0A0U1RRL7 71 aa5.04□□□□□ -1.6
HTT-201ENST00000355072 NOTCH2NLQ7Z3S9 236 aa5.03□□□□□ -1.6
HTT-201ENST00000355072 A0A087WTM6 91 aa5.03□□□□□ -1.6
HTT-201ENST00000355072 FLNCQ14315 2725 aa5.03□□□□□ -1.6
HTT-201ENST00000355072 S4R3F8 94 aa5.03□□□□□ -1.6
HTT-201ENST00000355072 UBR5O95071 2799 aaPredicted RBP5.03□□□□□ -1.6
HTT-201ENST00000355072 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.02□□□□□ -1.61
HTT-201ENST00000355072 FRYQ5TBA9 3013 aa5.02□□□□□ -1.61
HTT-201ENST00000355072 ANAPC11Q9NYG5 84 aa5.02□□□□□ -1.61
HTT-201ENST00000355072 J3QL48 77 aa5.01□□□□□ -1.61
HTT-201ENST00000355072 ZNF575Q86XF7 245 aa5.01□□□□□ -1.61
HTT-201ENST00000355072 NIPBLQ6KC79 2804 aaeCLIP5□□□□□ -1.61
HTT-201ENST00000355072 A0A096LNT2 108 aa5□□□□□ -1.61
HTT-201ENST00000355072 M0QZ58 72 aa4.99□□□□□ -1.61
HTT-201ENST00000355072 A6NN06 94 aa4.99□□□□□ -1.61
HTT-201ENST00000355072 SPINK7P58062 85 aa4.99□□□□□ -1.61
HTT-201ENST00000355072 PRR26Q8N8Z3 221 aa4.99□□□□□ -1.61
HTT-201ENST00000355072 NBEAL2Q6ZNJ1 2754 aa4.99□□□□□ -1.61
HTT-201ENST00000355072 R4GN34 69 aa4.98□□□□□ -1.61
HTT-201ENST00000355072 A0A0D9SG42 100 aa4.97□□□□□ -1.61
HTT-201ENST00000355072 Q5W150 140 aa4.97□□□□□ -1.61
HTT-201ENST00000355072 PLAC8Q9NZF1 115 aa4.97□□□□□ -1.61
HTT-201ENST00000355072 Q6ZSA8 131 aa4.97□□□□□ -1.61
HTT-201ENST00000355072 MGAQ8IWI9 3026 aa4.96□□□□□ -1.61
HTT-201ENST00000355072 KRTAP25-1Q3LHN0 102 aa4.95□□□□□ -1.62
HTT-201ENST00000355072 Q8N1X5 172 aa4.95□□□□□ -1.62
HTT-201ENST00000355072 LRBAP50851 2863 aa4.95□□□□□ -1.62
HTT-201ENST00000355072 PP632Q6XCG6 107 aa4.94□□□□□ -1.62
HTT-201ENST00000355072 CHD7Q9P2D1 2997 aa4.93□□□□□ -1.62
HTT-201ENST00000355072 H1FX-AS1Q4G0G2 97 aa4.92□□□□□ -1.62
HTT-201ENST00000355072 CHD9Q3L8U1 2897 aa4.91□□□□□ -1.62
HTT-201ENST00000355072 PANO1I0J062 215 aa4.91□□□□□ -1.62
HTT-201ENST00000355072 KALRNO60229 2985 aa4.91□□□□□ -1.62
HTT-201ENST00000355072 CYSTM1Q9H1C7 97 aa4.9□□□□□ -1.62
HTT-201ENST00000355072 TACC2O95359 2948 aa4.9□□□□□ -1.63
HTT-201ENST00000355072 KRTAP29-1A8MX34 341 aaPredicted RBP4.89□□□□□ -1.63
HTT-201ENST00000355072 C9orf92A6NGG3 77 aa4.88□□□□□ -1.63
HTT-201ENST00000355072 OXTP01178 125 aa4.88□□□□□ -1.63
HTT-201ENST00000355072 A0A1W2PNN7 141 aa4.88□□□□□ -1.63
HTT-201ENST00000355072 SMR3AQ99954 134 aa4.87□□□□□ -1.63
HTT-201ENST00000355072 TRIOO75962 3097 aa4.86□□□□□ -1.63
HTT-201ENST00000355072 PRAC1Q96KF2 57 aa4.85□□□□□ -1.63
HTT-201ENST00000355072 KRTAP4-16G5E9R7 235 aaPredicted RBP4.85□□□□□ -1.63
HTT-201ENST00000355072 NF1P21359 2839 aa4.85□□□□□ -1.63
HTT-201ENST00000355072 NBEAQ8NFP9 2946 aa4.84□□□□□ -1.64
HTT-201ENST00000355072 KRTAP26-1Q6PEX3 210 aa4.83□□□□□ -1.64
HTT-201ENST00000355072 KRTAP10-9P60411 292 aa4.82□□□□□ -1.64
HTT-201ENST00000355072 TENM3Q9P273 2699 aa4.82□□□□□ -1.64
HTT-201ENST00000355072 WDFY4Q6ZS81 3184 aa4.82□□□□□ -1.64
HTT-201ENST00000355072 K7EIL1 84 aa4.82□□□□□ -1.64
HTT-201ENST00000355072 TNRC18O15417 2968 aaPredicted RBP4.81□□□□□ -1.64
HTT-201ENST00000355072 ASH1LQ9NR48 2969 aaKnown RBP4.81□□□□□ -1.64
HTT-201ENST00000355072 KRTAP24-1Q3LI83 254 aa4.8□□□□□ -1.64
HTT-201ENST00000355072 KRTAP10-11P60412 298 aa4.8□□□□□ -1.64
HTT-201ENST00000355072 REV3LO60673 3130 aa4.78□□□□□ -1.64
HTT-201ENST00000355072 CELSR2Q9HCU4 2923 aa4.78□□□□□ -1.64
HTT-201ENST00000355072 PRUNE2Q8WUY3 3088 aa4.77□□□□□ -1.65
HTT-201ENST00000355072 LAMA1P25391 3075 aa4.77□□□□□ -1.65
HTT-201ENST00000355072 TENM1Q9UKZ4 2725 aa4.77□□□□□ -1.65
HTT-201ENST00000355072 PLAC4Q8WY50 150 aa4.75□□□□□ -1.65
HTT-201ENST00000355072 XIRP2A4UGR9 3374 aa4.74□□□□□ -1.65
HTT-201ENST00000355072 ZZEF1O43149 2961 aa4.74□□□□□ -1.65
HTT-201ENST00000355072 MKI67P46013 3256 aaKnown RBP4.74□□□□□ -1.65
HTT-201ENST00000355072 RANBP2P49792 3224 aaKnown RBP4.74□□□□□ -1.65
HTT-201ENST00000355072 HIVEP1P15822 2718 aa4.73□□□□□ -1.65
HTT-201ENST00000355072 USP34Q70CQ2 3546 aa4.72□□□□□ -1.65
HTT-201ENST00000355072 UNC80Q8N2C7 3258 aa4.72□□□□□ -1.65
HTT-201ENST00000355072 BOD1L1Q8NFC6 3051 aa4.71□□□□□ -1.66
HTT-201ENST00000355072 M0R2T5 61 aa4.71□□□□□ -1.66
HTT-201ENST00000355072 TGP01266 2768 aa4.7□□□□□ -1.66
HTT-201ENST00000355072 TNP1P09430 55 aa4.7□□□□□ -1.66
HTT-201ENST00000355072 C20orf166-AS1Q96NR2 134 aa4.7□□□□□ -1.66
HTT-201ENST00000355072 A0A0G2JQZ4 141 aa4.69□□□□□ -1.66
HTT-201ENST00000355072 PDZD2O15018 2839 aa4.69□□□□□ -1.66
HTT-201ENST00000355072 ADGRG4Q8IZF6 3080 aa4.69□□□□□ -1.66
HTT-201ENST00000355072 COL12A1Q99715 3063 aa4.68□□□□□ -1.66
HTT-201ENST00000355072 Q8NDZ9 215 aa4.68□□□□□ -1.66
HTT-201ENST00000355072 ADM2Q7Z4H4 148 aa4.68□□□□□ -1.66
HTT-201ENST00000355072 CASC10Q5T4H9 136 aa4.67□□□□□ -1.66
HTT-201ENST00000355072 LAMA3Q16787 3333 aa4.67□□□□□ -1.66
HTT-201ENST00000355072 NDUFAF8A1L188 74 aa4.66□□□□□ -1.66
HTT-201ENST00000355072 A8MUU9 505 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms