RNA–Protein interactions for RNA: ENST00000354534.10

SCN8A-201, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCN8A, Length 11,556 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-201ENST00000354534 A0A1W2PNM2 257 aa5.14□□□□□ -1.59
SCN8A-201ENST00000354534 SPRR4Q96PI1 79 aa5.14□□□□□ -1.59
SCN8A-201ENST00000354534 KLK9Q2XQG4 91 aa5.13□□□□□ -1.59
SCN8A-201ENST00000354534 SETXQ7Z333 2677 aaKnown RBP5.13□□□□□ -1.59
SCN8A-201ENST00000354534 KRTAP24-1Q3LI83 254 aa5.12□□□□□ -1.59
SCN8A-201ENST00000354534 PRR34Q9NV39 138 aa5.12□□□□□ -1.59
SCN8A-201ENST00000354534 C20orf166-AS1Q96NR2 134 aa5.12□□□□□ -1.59
SCN8A-201ENST00000354534 RPL37P61927 97 aaKnown RBP5.11□□□□□ -1.59
SCN8A-201ENST00000354534 A0A087WTM6 91 aa5.1□□□□□ -1.59
SCN8A-201ENST00000354534 FP248Q71RG6 208 aaPredicted RBP5.1□□□□□ -1.59
SCN8A-201ENST00000354534 CNBPP62633 177 aaKnown RBP5.08□□□□□ -1.6
SCN8A-201ENST00000354534 TRANK1O15050 2925 aa5.07□□□□□ -1.6
SCN8A-201ENST00000354534 LINC00612Q8N6U2 182 aa5.06□□□□□ -1.6
SCN8A-201ENST00000354534 M0QZ58 72 aa5.05□□□□□ -1.6
SCN8A-201ENST00000354534 KRTAP10-11P60412 298 aa5.04□□□□□ -1.6
SCN8A-201ENST00000354534 ZCCHC13Q8WW36 166 aaKnown RBP5.04□□□□□ -1.6
SCN8A-201ENST00000354534 NDUFAF8A1L188 74 aa5.04□□□□□ -1.6
SCN8A-201ENST00000354534 CHD9Q3L8U1 2897 aa5.03□□□□□ -1.6
SCN8A-201ENST00000354534 MAP1AP78559 2803 aaPredicted RBP5.03□□□□□ -1.6
SCN8A-201ENST00000354534 ZNF292O60281 2723 aa5.02□□□□□ -1.61
SCN8A-201ENST00000354534 TNP2Q05952 138 aa5.02□□□□□ -1.61
SCN8A-201ENST00000354534 CASC10Q5T4H9 136 aa5.01□□□□□ -1.61
SCN8A-201ENST00000354534 SPATA8Q6RVD6 105 aa5□□□□□ -1.61
SCN8A-201ENST00000354534 Q8NDZ9 215 aa5□□□□□ -1.61
SCN8A-201ENST00000354534 K7EIL1 84 aa5□□□□□ -1.61
SCN8A-201ENST00000354534 CYSTM1Q9H1C7 97 aa5□□□□□ -1.61
SCN8A-201ENST00000354534 CHD7Q9P2D1 2997 aa5□□□□□ -1.61
SCN8A-201ENST00000354534 GIG44P09565 113 aaPredicted RBP5□□□□□ -1.61
SCN8A-201ENST00000354534 Q5W150 140 aa4.99□□□□□ -1.61
SCN8A-201ENST00000354534 NBEAQ8NFP9 2946 aa4.99□□□□□ -1.61
SCN8A-201ENST00000354534 ADM2Q7Z4H4 148 aa4.98□□□□□ -1.61
SCN8A-201ENST00000354534 SEC61BP60468 96 aaKnown RBP4.98□□□□□ -1.61
SCN8A-201ENST00000354534 DSPP15924 2871 aaKnown RBP4.97□□□□□ -1.61
SCN8A-201ENST00000354534 NSD1Q96L73 2696 aaPredicted RBP4.97□□□□□ -1.61
SCN8A-201ENST00000354534 MMP24-AS1A0A0U1RRL7 71 aa4.96□□□□□ -1.62
SCN8A-201ENST00000354534 ASB16-AS1Q495Z4 193 aa4.96□□□□□ -1.62
SCN8A-201ENST00000354534 KRTAP25-1Q3LHN0 102 aa4.96□□□□□ -1.62
SCN8A-201ENST00000354534 ITPR2Q14571 2701 aa4.93□□□□□ -1.62
SCN8A-201ENST00000354534 C5orf42Q9H799 3197 aa4.92□□□□□ -1.62
SCN8A-201ENST00000354534 KMT2BQ9UMN6 2715 aaPredicted RBP4.92□□□□□ -1.62
SCN8A-201ENST00000354534 IGSF10Q6WRI0 2623 aa4.91□□□□□ -1.62
SCN8A-201ENST00000354534 UTP20O75691 2785 aaKnown RBP4.91□□□□□ -1.62
SCN8A-201ENST00000354534 C10orf95Q9H7T3 257 aa4.9□□□□□ -1.62
SCN8A-201ENST00000354534 Q5VSD8 79 aa4.9□□□□□ -1.62
SCN8A-201ENST00000354534 HTTP42858 3142 aa4.9□□□□□ -1.62
SCN8A-201ENST00000354534 UTRNP46939 3433 aa4.89□□□□□ -1.63
SCN8A-201ENST00000354534 OXTP01178 125 aa4.89□□□□□ -1.63
SCN8A-201ENST00000354534 KRTAP10-3P60369 221 aa4.88□□□□□ -1.63
SCN8A-201ENST00000354534 NBEAL2Q6ZNJ1 2754 aa4.87□□□□□ -1.63
SCN8A-201ENST00000354534 APCP25054 2843 aa4.86□□□□□ -1.63
SCN8A-201ENST00000354534 LAMA2P24043 3122 aaKnown RBP4.85□□□□□ -1.63
SCN8A-201ENST00000354534 TRIOO75962 3097 aa4.84□□□□□ -1.63
SCN8A-201ENST00000354534 LINC00472Q9H8W2 130 aa4.83□□□□□ -1.64
SCN8A-201ENST00000354534 A0A096LNT2 108 aa4.83□□□□□ -1.64
SCN8A-201ENST00000354534 CFAP54Q96N23 3096 aa4.82□□□□□ -1.64
SCN8A-201ENST00000354534 UBR5O95071 2799 aaPredicted RBP4.82□□□□□ -1.64
SCN8A-201ENST00000354534 A8MU10 97 aa4.81□□□□□ -1.64
SCN8A-201ENST00000354534 A6NN06 94 aa4.8□□□□□ -1.64
SCN8A-201ENST00000354534 ITPR1Q14643 2758 aa4.78□□□□□ -1.64
SCN8A-201ENST00000354534 PANO1I0J062 215 aa4.78□□□□□ -1.64
SCN8A-201ENST00000354534 RANBP2P49792 3224 aaKnown RBP4.78□□□□□ -1.64
SCN8A-201ENST00000354534 Q6ZR54 194 aa4.78□□□□□ -1.64
SCN8A-201ENST00000354534 KRTAP26-1Q6PEX3 210 aa4.78□□□□□ -1.64
SCN8A-201ENST00000354534 A8MUU9 505 aa4.77□□□□□ -1.65
SCN8A-201ENST00000354534 SPRR1AP35321 89 aa4.77□□□□□ -1.65
SCN8A-201ENST00000354534 PLAC8Q9NZF1 115 aa4.77□□□□□ -1.65
SCN8A-201ENST00000354534 SPRR1BP22528 89 aa4.76□□□□□ -1.65
SCN8A-201ENST00000354534 REV3LO60673 3130 aa4.76□□□□□ -1.65
SCN8A-201ENST00000354534 TACC2O95359 2948 aa4.75□□□□□ -1.65
SCN8A-201ENST00000354534 TNP1P09430 55 aa4.75□□□□□ -1.65
SCN8A-201ENST00000354534 FLNCQ14315 2725 aa4.7□□□□□ -1.66
SCN8A-201ENST00000354534 P0C880 135 aa4.7□□□□□ -1.66
SCN8A-201ENST00000354534 VPS13AQ96RL7 3174 aa4.69□□□□□ -1.66
SCN8A-201ENST00000354534 XIRP2A4UGR9 3374 aa4.68□□□□□ -1.66
SCN8A-201ENST00000354534 HIVEP1P15822 2718 aa4.67□□□□□ -1.66
SCN8A-201ENST00000354534 FRYQ5TBA9 3013 aa4.67□□□□□ -1.66
SCN8A-201ENST00000354534 MKI67P46013 3256 aaKnown RBP4.66□□□□□ -1.66
SCN8A-201ENST00000354534 BRCA2P51587 3418 aa4.66□□□□□ -1.66
SCN8A-201ENST00000354534 FREM2Q5SZK8 3169 aa4.66□□□□□ -1.66
SCN8A-201ENST00000354534 MGAQ8IWI9 3026 aa4.65□□□□□ -1.66
SCN8A-201ENST00000354534 KRTAP4-16G5E9R7 235 aaPredicted RBP4.63□□□□□ -1.67
SCN8A-201ENST00000354534 TENM3Q9P273 2699 aa4.63□□□□□ -1.67
SCN8A-201ENST00000354534 KRTAP11-1Q8IUC1 163 aa4.63□□□□□ -1.67
SCN8A-201ENST00000354534 PP632Q6XCG6 107 aa4.62□□□□□ -1.67
SCN8A-201ENST00000354534 UNC80Q8N2C7 3258 aa4.62□□□□□ -1.67
SCN8A-201ENST00000354534 LAMA1P25391 3075 aa4.61□□□□□ -1.67
SCN8A-201ENST00000354534 KRTAP1-1Q07627 177 aa4.61□□□□□ -1.67
SCN8A-201ENST00000354534 KALRNO60229 2985 aa4.61□□□□□ -1.67
SCN8A-201ENST00000354534 KRTAP1-3Q8IUG1 177 aa4.6□□□□□ -1.67
SCN8A-201ENST00000354534 CELSR3Q9NYQ7 3312 aa4.6□□□□□ -1.67
SCN8A-201ENST00000354534 A0A087X002 238 aa4.6□□□□□ -1.67
SCN8A-201ENST00000354534 LRBAP50851 2863 aa4.6□□□□□ -1.67
SCN8A-201ENST00000354534 NIPBLQ6KC79 2804 aaeCLIP4.59□□□□□ -1.67
SCN8A-201ENST00000354534 LAMA3Q16787 3333 aa4.59□□□□□ -1.67
SCN8A-201ENST00000354534 HRNRQ86YZ3 2850 aaPredicted RBP4.59□□□□□ -1.67
SCN8A-201ENST00000354534 KRTAP29-1A8MX34 341 aaPredicted RBP4.59□□□□□ -1.68
SCN8A-201ENST00000354534 KRTAP10-1P60331 282 aa4.58□□□□□ -1.68
SCN8A-201ENST00000354534 KRTAP10-2P60368 255 aa4.58□□□□□ -1.68
SCN8A-201ENST00000354534 NOTCH2NLQ7Z3S9 236 aa4.58□□□□□ -1.68
SCN8A-201ENST00000354534 NF1P21359 2839 aa4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 147.4 ms