RNA–Protein interactions for RNA: ENST00000351677.6

PTPN11-201, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPN11, Length 6,101 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-201ENST00000351677 DNAH14Q0VDD8 3507 aa9.89□□□□□ -0.83
PTPN11-201ENST00000351677 SZT2Q5T011 3432 aa9.87□□□□□ -0.83
PTPN11-201ENST00000351677 A0A0D9SG42 100 aa9.86□□□□□ -0.83
PTPN11-201ENST00000351677 GCN1Q92616 2671 aaKnown RBP9.86□□□□□ -0.83
PTPN11-201ENST00000351677 MMP24-AS1A0A0U1RRL7 71 aa9.85□□□□□ -0.83
PTPN11-201ENST00000351677 Q1T7F1 81 aa9.85□□□□□ -0.83
PTPN11-201ENST00000351677 KRTAP1-5Q9BYS1 174 aa9.85□□□□□ -0.83
PTPN11-201ENST00000351677 TEP1Q99973 2627 aaKnown RBP9.85□□□□□ -0.83
PTPN11-201ENST00000351677 KTN1-AS1Q86SY8 53 aa9.85□□□□□ -0.83
PTPN11-201ENST00000351677 IGLV7-46A0A075B6I9 117 aa9.84□□□□□ -0.83
PTPN11-201ENST00000351677 CDC42SE1Q9NRR8 79 aa9.84□□□□□ -0.83
PTPN11-201ENST00000351677 VCANP13611 3396 aa9.84□□□□□ -0.83
PTPN11-201ENST00000351677 LAMA1P25391 3075 aa9.84□□□□□ -0.83
PTPN11-201ENST00000351677 CRIPTQ9P021 101 aa9.84□□□□□ -0.83
PTPN11-201ENST00000351677 FREM2Q5SZK8 3169 aa9.83□□□□□ -0.84
PTPN11-201ENST00000351677 KRTAP26-1Q6PEX3 210 aa9.83□□□□□ -0.84
PTPN11-201ENST00000351677 PLAC8Q9NZF1 115 aa9.83□□□□□ -0.84
PTPN11-201ENST00000351677 HRES1P13985 223 aa9.83□□□□□ -0.84
PTPN11-201ENST00000351677 FAM229BQ4G0N7 80 aa9.82□□□□□ -0.84
PTPN11-201ENST00000351677 RBM12B-AS1Q9P1G2 102 aa9.82□□□□□ -0.84
PTPN11-201ENST00000351677 LINC01554Q52M75 96 aa9.81□□□□□ -0.84
PTPN11-201ENST00000351677 Q8N9P0 234 aaPredicted RBP9.77□□□□□ -0.85
PTPN11-201ENST00000351677 LINC00472Q9H8W2 130 aa9.76□□□□□ -0.85
PTPN11-201ENST00000351677 NBEAL2Q6ZNJ1 2754 aa9.75□□□□□ -0.85
PTPN11-201ENST00000351677 UNC79Q9P2D8 2635 aa9.75□□□□□ -0.85
PTPN11-201ENST00000351677 LCA10Q71F78 164 aa9.74□□□□□ -0.85
PTPN11-201ENST00000351677 SPRR1BP22528 89 aa9.74□□□□□ -0.85
PTPN11-201ENST00000351677 Q5XG85 94 aa9.73□□□□□ -0.85
PTPN11-201ENST00000351677 IGSF10Q6WRI0 2623 aa9.72□□□□□ -0.85
PTPN11-201ENST00000351677 FP248Q71RG6 208 aaPredicted RBP9.71□□□□□ -0.86
PTPN11-201ENST00000351677 COL6A5A8TX70 2615 aa9.69□□□□□ -0.86
PTPN11-201ENST00000351677 KALRNO60229 2985 aa9.68□□□□□ -0.86
PTPN11-201ENST00000351677 STAB1Q9NY15 2570 aa9.68□□□□□ -0.86
PTPN11-201ENST00000351677 Q75L30 129 aa9.68□□□□□ -0.86
PTPN11-201ENST00000351677 NBEAL1Q6ZS30 2694 aa9.68□□□□□ -0.86
PTPN11-201ENST00000351677 NOTCH1P46531 2555 aa9.67□□□□□ -0.86
PTPN11-201ENST00000351677 Q6ZSA8 131 aa9.67□□□□□ -0.86
PTPN11-201ENST00000351677 ZCCHC13Q8WW36 166 aaKnown RBP9.67□□□□□ -0.86
PTPN11-201ENST00000351677 SETXQ7Z333 2677 aaKnown RBP9.66□□□□□ -0.86
PTPN11-201ENST00000351677 Q5W150 140 aa9.66□□□□□ -0.86
PTPN11-201ENST00000351677 A0A1B0GU33 70 aa9.64□□□□□ -0.87
PTPN11-201ENST00000351677 LINC01558Q9Y6Z2 57 aa9.63□□□□□ -0.87
PTPN11-201ENST00000351677 NBEAQ8NFP9 2946 aa9.63□□□□□ -0.87
PTPN11-201ENST00000351677 COL6A3P12111 3177 aa9.63□□□□□ -0.87
PTPN11-201ENST00000351677 BOD1L1Q8NFC6 3051 aa9.61□□□□□ -0.87
PTPN11-201ENST00000351677 PANO1I0J062 215 aa9.6□□□□□ -0.87
PTPN11-201ENST00000351677 UBR5O95071 2799 aaPredicted RBP9.6□□□□□ -0.87
PTPN11-201ENST00000351677 ATMQ13315 3056 aa9.59□□□□□ -0.87
PTPN11-201ENST00000351677 KRTAP4-16G5E9R7 235 aaPredicted RBP9.59□□□□□ -0.87
PTPN11-201ENST00000351677 KRTAP10-2P60368 255 aa9.59□□□□□ -0.87
PTPN11-201ENST00000351677 OXTP01178 125 aa9.58□□□□□ -0.88
PTPN11-201ENST00000351677 KRTAP10-1P60331 282 aa9.58□□□□□ -0.88
PTPN11-201ENST00000351677 Q5VV11 94 aa9.57□□□□□ -0.88
PTPN11-201ENST00000351677 ADGRG4Q8IZF6 3080 aa9.56□□□□□ -0.88
PTPN11-201ENST00000351677 FRYLO94915 3013 aa9.55□□□□□ -0.88
PTPN11-201ENST00000351677 LRBAP50851 2863 aa9.54□□□□□ -0.88
PTPN11-201ENST00000351677 SPINK7P58062 85 aa9.52□□□□□ -0.89
PTPN11-201ENST00000351677 LINC00483Q53H64 154 aa9.52□□□□□ -0.89
PTPN11-201ENST00000351677 TACC2O95359 2948 aa9.5□□□□□ -0.89
PTPN11-201ENST00000351677 COL12A1Q99715 3063 aa9.49□□□□□ -0.89
PTPN11-201ENST00000351677 S4R3F8 94 aa9.48□□□□□ -0.89
PTPN11-201ENST00000351677 ITPR1Q14643 2758 aa9.47□□□□□ -0.89
PTPN11-201ENST00000351677 PRAC1Q96KF2 57 aa9.47□□□□□ -0.89
PTPN11-201ENST00000351677 DMXL2Q8TDJ6 3036 aa9.47□□□□□ -0.89
PTPN11-201ENST00000351677 SPEGQ15772 3267 aa9.44□□□□□ -0.9
PTPN11-201ENST00000351677 FLNCQ14315 2725 aa9.43□□□□□ -0.9
PTPN11-201ENST00000351677 KRTAP29-1A8MX34 341 aaPredicted RBP9.43□□□□□ -0.9
PTPN11-201ENST00000351677 CAMK2N1Q7Z7J9 78 aa9.43□□□□□ -0.9
PTPN11-201ENST00000351677 KRTAP11-1Q8IUC1 163 aa9.42□□□□□ -0.9
PTPN11-201ENST00000351677 CSAG1Q6PB30 78 aa9.42□□□□□ -0.9
PTPN11-201ENST00000351677 ITPR2Q14571 2701 aa9.41□□□□□ -0.9
PTPN11-201ENST00000351677 Q5VSD8 79 aa9.41□□□□□ -0.9
PTPN11-201ENST00000351677 DMAC1Q96GE9 116 aa9.41□□□□□ -0.9
PTPN11-201ENST00000351677 SPTBN5Q9NRC6 3674 aaKnown RBP9.4□□□□□ -0.9
PTPN11-201ENST00000351677 A0A087X002 238 aa9.4□□□□□ -0.91
PTPN11-201ENST00000351677 Q6ZR54 194 aa9.39□□□□□ -0.91
PTPN11-201ENST00000351677 CFAP47Q6ZTR5 3102 aa9.39□□□□□ -0.91
PTPN11-201ENST00000351677 LCE6AA0A183 80 aa9.37□□□□□ -0.91
PTPN11-201ENST00000351677 NOTCH2NLQ7Z3S9 236 aa9.37□□□□□ -0.91
PTPN11-201ENST00000351677 KRTAP7-1Q8IUC3 87 aa9.36□□□□□ -0.91
PTPN11-201ENST00000351677 M0R2T5 61 aa9.36□□□□□ -0.91
PTPN11-201ENST00000351677 BAHCC1Q9P281 2608 aa9.35□□□□□ -0.91
PTPN11-201ENST00000351677 ASH1LQ9NR48 2969 aaKnown RBP9.34□□□□□ -0.91
PTPN11-201ENST00000351677 UTP20O75691 2785 aaKnown RBP9.32□□□□□ -0.92
PTPN11-201ENST00000351677 NSD1Q96L73 2696 aaPredicted RBP9.31□□□□□ -0.92
PTPN11-201ENST00000351677 STAB2Q8WWQ8 2551 aa9.31□□□□□ -0.92
PTPN11-201ENST00000351677 Q6ZRN7 208 aaPredicted RBP9.28□□□□□ -0.92
PTPN11-201ENST00000351677 EYSQ5T1H1 3165 aa9.28□□□□□ -0.92
PTPN11-201ENST00000351677 LUZP6Q538Z0 58 aa9.28□□□□□ -0.92
PTPN11-201ENST00000351677 R4GN34 69 aa9.26□□□□□ -0.93
PTPN11-201ENST00000351677 ZZEF1O43149 2961 aa9.26□□□□□ -0.93
PTPN11-201ENST00000351677 REV3LO60673 3130 aa9.25□□□□□ -0.93
PTPN11-201ENST00000351677 FLG2Q5D862 2391 aaPredicted RBP9.24□□□□□ -0.93
PTPN11-201ENST00000351677 DMBT1Q9UGM3 2413 aaPredicted RBP9.24□□□□□ -0.93
PTPN11-201ENST00000351677 H1FX-AS1Q4G0G2 97 aa9.22□□□□□ -0.93
PTPN11-201ENST00000351677 USP34Q70CQ2 3546 aa9.22□□□□□ -0.93
PTPN11-201ENST00000351677 SEC61BP60468 96 aaKnown RBP9.22□□□□□ -0.93
PTPN11-201ENST00000351677 APCP25054 2843 aa9.21□□□□□ -0.94
PTPN11-201ENST00000351677 HIVEP1P15822 2718 aa9.21□□□□□ -0.94
PTPN11-201ENST00000351677 RPL37P61927 97 aaKnown RBP9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms