RNA–Protein interactions for RNA: ENST00000347140.7

R3HDM2-201, Transcript of R3H domain containing 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene R3HDM2, Length 4,331 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM2-201ENST00000347140 ZCCHC13Q8WW36 166 aaKnown RBP9.94□□□□□ -0.82
R3HDM2-201ENST00000347140 LCE6AA0A183 80 aa9.93□□□□□ -0.82
R3HDM2-201ENST00000347140 UBR5O95071 2799 aaPredicted RBP9.93□□□□□ -0.82
R3HDM2-201ENST00000347140 LINC00588Q9Y4M8 146 aa9.92□□□□□ -0.82
R3HDM2-201ENST00000347140 KRTAP4-16G5E9R7 235 aaPredicted RBP9.92□□□□□ -0.82
R3HDM2-201ENST00000347140 RETNLBQ9BQ08 111 aa9.9□□□□□ -0.82
R3HDM2-201ENST00000347140 C8orf87E5RJ46 101 aa9.89□□□□□ -0.83
R3HDM2-201ENST00000347140 ZNF706Q9Y5V0 76 aaPredicted RBP9.89□□□□□ -0.83
R3HDM2-201ENST00000347140 A8MWP4 228 aa9.87□□□□□ -0.83
R3HDM2-201ENST00000347140 KRTAP10-11P60412 298 aa9.87□□□□□ -0.83
R3HDM2-201ENST00000347140 ITPR2Q14571 2701 aa9.86□□□□□ -0.83
R3HDM2-201ENST00000347140 H3BS24 57 aa9.86□□□□□ -0.83
R3HDM2-201ENST00000347140 SPANXA2-OT1Q8N9U9 137 aa9.86□□□□□ -0.83
R3HDM2-201ENST00000347140 HECTD1Q9ULT8 2610 aa9.86□□□□□ -0.83
R3HDM2-201ENST00000347140 TEP1Q99973 2627 aaKnown RBP9.86□□□□□ -0.83
R3HDM2-201ENST00000347140 C14orf177Q52M58 125 aa9.85□□□□□ -0.83
R3HDM2-201ENST00000347140 SPINK6Q6UWN8 80 aa9.84□□□□□ -0.83
R3HDM2-201ENST00000347140 C16orf90A8MZG2 172 aa9.84□□□□□ -0.83
R3HDM2-201ENST00000347140 COA5Q86WW8 74 aa9.81□□□□□ -0.84
R3HDM2-201ENST00000347140 IGLV9-49A0A0B4J1Y8 123 aa9.8□□□□□ -0.84
R3HDM2-201ENST00000347140 ATP11AUNQ6ZP68 121 aa9.8□□□□□ -0.84
R3HDM2-201ENST00000347140 PHF5AQ7RTV0 110 aaKnown RBP9.8□□□□□ -0.84
R3HDM2-201ENST00000347140 SPINT4Q6UDR6 99 aa9.8□□□□□ -0.84
R3HDM2-201ENST00000347140 FLG2Q5D862 2391 aaPredicted RBP9.8□□□□□ -0.84
R3HDM2-201ENST00000347140 Q5VV11 94 aa9.78□□□□□ -0.84
R3HDM2-201ENST00000347140 KTN1-AS1Q86SY8 53 aa9.78□□□□□ -0.84
R3HDM2-201ENST00000347140 KRTAP7-1Q8IUC3 87 aa9.78□□□□□ -0.84
R3HDM2-201ENST00000347140 HELZ2Q9BYK8 2649 aaKnown RBP9.77□□□□□ -0.84
R3HDM2-201ENST00000347140 VWFP04275 2813 aa9.77□□□□□ -0.84
R3HDM2-201ENST00000347140 Q8N9P0 234 aaPredicted RBP9.77□□□□□ -0.85
R3HDM2-201ENST00000347140 SPINK1P00995 79 aa9.77□□□□□ -0.85
R3HDM2-201ENST00000347140 CNBPP62633 177 aaKnown RBP9.77□□□□□ -0.85
R3HDM2-201ENST00000347140 IGLV8-61A0A075B6I0 122 aa9.76□□□□□ -0.85
R3HDM2-201ENST00000347140 CHTF8P0CG12 524 aa9.76□□□□□ -0.85
R3HDM2-201ENST00000347140 LCA10Q71F78 164 aa9.76□□□□□ -0.85
R3HDM2-201ENST00000347140 BAHCC1Q9P281 2608 aa9.76□□□□□ -0.85
R3HDM2-201ENST00000347140 HIVEP1P15822 2718 aa9.76□□□□□ -0.85
R3HDM2-201ENST00000347140 TP53AIP1Q9HCN2 124 aa9.75□□□□□ -0.85
R3HDM2-201ENST00000347140 IGHV6-1A0A0B4J1U7 121 aa9.75□□□□□ -0.85
R3HDM2-201ENST00000347140 AKAP9Q99996 3911 aa9.74□□□□□ -0.85
R3HDM2-201ENST00000347140 A0A1B0GU69 56 aa9.73□□□□□ -0.85
R3HDM2-201ENST00000347140 KRTAP29-1A8MX34 341 aaPredicted RBP9.73□□□□□ -0.85
R3HDM2-201ENST00000347140 C7orf65Q6ZTY9 151 aa9.71□□□□□ -0.86
R3HDM2-201ENST00000347140 NBPF19A0A087WUL8 3843 aa9.71□□□□□ -0.86
R3HDM2-201ENST00000347140 LOC101927531A0A1B0GV80 90 aa9.69□□□□□ -0.86
R3HDM2-201ENST00000347140 MOBPQ13875 183 aa9.69□□□□□ -0.86
R3HDM2-201ENST00000347140 LINC00472Q9H8W2 130 aa9.68□□□□□ -0.86
R3HDM2-201ENST00000347140 IGLV7-46A0A075B6I9 117 aa9.67□□□□□ -0.86
R3HDM2-201ENST00000347140 MMP24-AS1A0A0U1RRL7 71 aa9.66□□□□□ -0.86
R3HDM2-201ENST00000347140 Q75L30 129 aa9.66□□□□□ -0.86
R3HDM2-201ENST00000347140 FLNBO75369 2602 aaKnown RBP9.65□□□□□ -0.86
R3HDM2-201ENST00000347140 C8orf17Q9NRJ1 99 aa9.64□□□□□ -0.87
R3HDM2-201ENST00000347140 NSD1Q96L73 2696 aaPredicted RBP9.64□□□□□ -0.87
R3HDM2-201ENST00000347140 A8MU10 97 aa9.63□□□□□ -0.87
R3HDM2-201ENST00000347140 NOTCH1P46531 2555 aa9.63□□□□□ -0.87
R3HDM2-201ENST00000347140 C9orf163Q8N9P6 203 aa9.63□□□□□ -0.87
R3HDM2-201ENST00000347140 TENM1Q9UKZ4 2725 aa9.63□□□□□ -0.87
R3HDM2-201ENST00000347140 SPRR1BP22528 89 aa9.63□□□□□ -0.87
R3HDM2-201ENST00000347140 SSBP3-AS1Q7Z2R9 100 aa9.62□□□□□ -0.87
R3HDM2-201ENST00000347140 ZNF469Q96JG9 3925 aaPredicted RBP9.62□□□□□ -0.87
R3HDM2-201ENST00000347140 RBM12B-AS1Q9P1G2 102 aa9.62□□□□□ -0.87
R3HDM2-201ENST00000347140 PDZD2O15018 2839 aa9.61□□□□□ -0.87
R3HDM2-201ENST00000347140 CDC42SE1Q9NRR8 79 aa9.61□□□□□ -0.87
R3HDM2-201ENST00000347140 KRTAP24-1Q3LI83 254 aa9.6□□□□□ -0.87
R3HDM2-201ENST00000347140 MRPL34Q9BQ48 92 aaKnown RBP9.58□□□□□ -0.88
R3HDM2-201ENST00000347140 MAST4O15021 2626 aa9.57□□□□□ -0.88
R3HDM2-201ENST00000347140 A0A1B0GVX0 72 aa9.57□□□□□ -0.88
R3HDM2-201ENST00000347140 ANK3Q12955 4377 aaKnown RBP9.57□□□□□ -0.88
R3HDM2-201ENST00000347140 TENM3Q9P273 2699 aa9.57□□□□□ -0.88
R3HDM2-201ENST00000347140 LINC01558Q9Y6Z2 57 aa9.54□□□□□ -0.88
R3HDM2-201ENST00000347140 PKD1L1Q8TDX9 2849 aa9.54□□□□□ -0.88
R3HDM2-201ENST00000347140 STAB1Q9NY15 2570 aa9.53□□□□□ -0.88
R3HDM2-201ENST00000347140 KRTAP1-5Q9BYS1 174 aa9.53□□□□□ -0.88
R3HDM2-201ENST00000347140 KRTAP11-1Q8IUC1 163 aa9.52□□□□□ -0.89
R3HDM2-201ENST00000347140 TENM4Q6N022 2769 aa9.51□□□□□ -0.89
R3HDM2-201ENST00000347140 ACYP2P14621 99 aa9.5□□□□□ -0.89
R3HDM2-201ENST00000347140 COL6A5A8TX70 2615 aa9.48□□□□□ -0.89
R3HDM2-201ENST00000347140 K7EIL1 84 aa9.48□□□□□ -0.89
R3HDM2-201ENST00000347140 HRES1P13985 223 aa9.48□□□□□ -0.89
R3HDM2-201ENST00000347140 CIRBP-AS1Q8TBR5 109 aa9.47□□□□□ -0.89
R3HDM2-201ENST00000347140 UQCR11O14957 56 aa9.46□□□□□ -0.9
R3HDM2-201ENST00000347140 PRR26Q8N8Z3 221 aa9.45□□□□□ -0.9
R3HDM2-201ENST00000347140 NBEAL1Q6ZS30 2694 aa9.45□□□□□ -0.9
R3HDM2-201ENST00000347140 Q6ZR54 194 aa9.45□□□□□ -0.9
R3HDM2-201ENST00000347140 NBDYA0A0U1RRE5 68 aa9.44□□□□□ -0.9
R3HDM2-201ENST00000347140 SPINK7P58062 85 aa9.44□□□□□ -0.9
R3HDM2-201ENST00000347140 PLA2G1BP04054 148 aaKnown RBP9.44□□□□□ -0.9
R3HDM2-201ENST00000347140 LINC01554Q52M75 96 aa9.43□□□□□ -0.9
R3HDM2-201ENST00000347140 ANAPC11Q9NYG5 84 aa9.43□□□□□ -0.9
R3HDM2-201ENST00000347140 IGKV2D-30A0A075B6S6 120 aa9.43□□□□□ -0.9
R3HDM2-201ENST00000347140 IGKV2-30P06310 120 aa9.43□□□□□ -0.9
R3HDM2-201ENST00000347140 A6NN06 94 aa9.4□□□□□ -0.9
R3HDM2-201ENST00000347140 KMT2BQ9UMN6 2715 aaPredicted RBP9.4□□□□□ -0.9
R3HDM2-201ENST00000347140 APLNQ9ULZ1 77 aa9.4□□□□□ -0.91
R3HDM2-201ENST00000347140 DMBT1Q9UGM3 2413 aaPredicted RBP9.38□□□□□ -0.91
R3HDM2-201ENST00000347140 MIR22HGQ0VDD5 57 aa9.38□□□□□ -0.91
R3HDM2-201ENST00000347140 Q96NJ1 140 aa9.37□□□□□ -0.91
R3HDM2-201ENST00000347140 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.37□□□□□ -0.91
R3HDM2-201ENST00000347140 MGAM2Q2M2H8 2515 aa9.37□□□□□ -0.91
R3HDM2-201ENST00000347140 TRRAPQ9Y4A5 3859 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms