RNA–Protein interactions for RNA: ENST00000346436.10

CLCN6-202, Transcript of chloride voltage-gated channel 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN6, Length 5,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-202ENST00000346436 A0A0G2JQZ4 141 aa7.08□□□□□ -1.28
CLCN6-202ENST00000346436 A0A1W2PNN7 141 aa7.08□□□□□ -1.28
CLCN6-202ENST00000346436 IGLV7-46A0A075B6I9 117 aa7.08□□□□□ -1.28
CLCN6-202ENST00000346436 TRBV7-4A0A0J9YYF1 115 aa7.08□□□□□ -1.28
CLCN6-202ENST00000346436 C15orf56Q8N910 161 aa7.07□□□□□ -1.28
CLCN6-202ENST00000346436 PLA2G2DQ9UNK4 145 aa7.07□□□□□ -1.28
CLCN6-202ENST00000346436 KCNQ1DNQ9H478 68 aa7.07□□□□□ -1.28
CLCN6-202ENST00000346436 WIPF1O43516 503 aa7.06□□□□□ -1.28
CLCN6-202ENST00000346436 ASH1LQ9NR48 2969 aaKnown RBP7.06□□□□□ -1.28
CLCN6-202ENST00000346436 MRPL34Q9BQ48 92 aaKnown RBP7.06□□□□□ -1.28
CLCN6-202ENST00000346436 MAST4O15021 2626 aa7.05□□□□□ -1.28
CLCN6-202ENST00000346436 A0A1B0GU69 56 aa7.05□□□□□ -1.28
CLCN6-202ENST00000346436 RPS28P62857 69 aaKnown RBP7.04□□□□□ -1.28
CLCN6-202ENST00000346436 LINC01600Q96MT4 127 aa7.04□□□□□ -1.28
CLCN6-202ENST00000346436 Q8NDZ9 215 aa7.04□□□□□ -1.28
CLCN6-202ENST00000346436 OBSCN-AS1Q96MR7 158 aa7.04□□□□□ -1.28
CLCN6-202ENST00000346436 KRTAP21-3Q3LHN1 58 aa7.04□□□□□ -1.28
CLCN6-202ENST00000346436 A8MWP4 228 aa7.03□□□□□ -1.28
CLCN6-202ENST00000346436 ZANQ9Y493 2812 aa7.03□□□□□ -1.28
CLCN6-202ENST00000346436 K7EQZ3 153 aa7.01□□□□□ -1.29
CLCN6-202ENST00000346436 Q8N377 158 aa7□□□□□ -1.29
CLCN6-202ENST00000346436 C1orf195Q5TG92 126 aa7□□□□□ -1.29
CLCN6-202ENST00000346436 UTP20O75691 2785 aaKnown RBP7□□□□□ -1.29
CLCN6-202ENST00000346436 SETXQ7Z333 2677 aaKnown RBP7□□□□□ -1.29
CLCN6-202ENST00000346436 CYSTM1Q9H1C7 97 aa6.99□□□□□ -1.29
CLCN6-202ENST00000346436 SVEP1Q4LDE5 3571 aa6.99□□□□□ -1.29
CLCN6-202ENST00000346436 DSCR10P59022 87 aa6.99□□□□□ -1.29
CLCN6-202ENST00000346436 SEC61BP60468 96 aaKnown RBP6.99□□□□□ -1.29
CLCN6-202ENST00000346436 SPRR4Q96PI1 79 aa6.99□□□□□ -1.29
CLCN6-202ENST00000346436 CRYBG3Q68DQ2 2970 aa6.98□□□□□ -1.29
CLCN6-202ENST00000346436 UNC79Q9P2D8 2635 aa6.97□□□□□ -1.29
CLCN6-202ENST00000346436 FAM229BQ4G0N7 80 aa6.97□□□□□ -1.29
CLCN6-202ENST00000346436 Q5VSD8 79 aa6.97□□□□□ -1.29
CLCN6-202ENST00000346436 H7BZZ5 65 aa6.97□□□□□ -1.29
CLCN6-202ENST00000346436 DCHS2Q6V1P9 2916 aa6.96□□□□□ -1.3
CLCN6-202ENST00000346436 ERC2-IT1O76042 136 aa6.96□□□□□ -1.3
CLCN6-202ENST00000346436 A0A1B0GVX0 72 aa6.95□□□□□ -1.3
CLCN6-202ENST00000346436 OXTP01178 125 aa6.95□□□□□ -1.3
CLCN6-202ENST00000346436 CD164Q04900 197 aa6.95□□□□□ -1.3
CLCN6-202ENST00000346436 C8orf17Q9NRJ1 99 aa6.94□□□□□ -1.3
CLCN6-202ENST00000346436 UBR5O95071 2799 aaPredicted RBP6.94□□□□□ -1.3
CLCN6-202ENST00000346436 TEP1Q99973 2627 aaKnown RBP6.94□□□□□ -1.3
CLCN6-202ENST00000346436 KLKP1Q107X0 134 aa6.93□□□□□ -1.3
CLCN6-202ENST00000346436 PRO0628Q9UI54 55 aa6.93□□□□□ -1.3
CLCN6-202ENST00000346436 IGFL1Q6UW32 110 aa6.92□□□□□ -1.3
CLCN6-202ENST00000346436 PRR26Q8N8Z3 221 aa6.91□□□□□ -1.3
CLCN6-202ENST00000346436 A0A1W2PNM2 257 aa6.91□□□□□ -1.3
CLCN6-202ENST00000346436 PMAIP1Q13794 54 aa6.91□□□□□ -1.3
CLCN6-202ENST00000346436 FBN2P35556 2912 aa6.9□□□□□ -1.3
CLCN6-202ENST00000346436 ANAPC11Q9NYG5 84 aa6.88□□□□□ -1.31
CLCN6-202ENST00000346436 STAB1Q9NY15 2570 aa6.88□□□□□ -1.31
CLCN6-202ENST00000346436 NOTCH1P46531 2555 aa6.87□□□□□ -1.31
CLCN6-202ENST00000346436 PLAC8Q9NZF1 115 aa6.87□□□□□ -1.31
CLCN6-202ENST00000346436 PRR15Q8IV56 129 aa6.87□□□□□ -1.31
CLCN6-202ENST00000346436 CELSR1Q9NYQ6 3014 aa6.86□□□□□ -1.31
CLCN6-202ENST00000346436 BAHCC1Q9P281 2608 aa6.85□□□□□ -1.31
CLCN6-202ENST00000346436 SPENQ96T58 3664 aaKnown RBP6.85□□□□□ -1.31
CLCN6-202ENST00000346436 NF1P21359 2839 aa6.84□□□□□ -1.31
CLCN6-202ENST00000346436 CELSR2Q9HCU4 2923 aa6.82□□□□□ -1.32
CLCN6-202ENST00000346436 A8MUN3 132 aa6.82□□□□□ -1.32
CLCN6-202ENST00000346436 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.82□□□□□ -1.32
CLCN6-202ENST00000346436 LINC01554Q52M75 96 aa6.81□□□□□ -1.32
CLCN6-202ENST00000346436 IGLV5-48A0A075B6I7 105 aa6.81□□□□□ -1.32
CLCN6-202ENST00000346436 CUBNO60494 3623 aa6.8□□□□□ -1.32
CLCN6-202ENST00000346436 ITPR2Q14571 2701 aa6.8□□□□□ -1.32
CLCN6-202ENST00000346436 HRES1P13985 223 aa6.79□□□□□ -1.32
CLCN6-202ENST00000346436 APCP25054 2843 aa6.79□□□□□ -1.32
CLCN6-202ENST00000346436 OCR1Q9BZK8 76 aa6.79□□□□□ -1.32
CLCN6-202ENST00000346436 IGLV8-61A0A075B6I0 122 aa6.77□□□□□ -1.33
CLCN6-202ENST00000346436 COL6A5A8TX70 2615 aa6.77□□□□□ -1.33
CLCN6-202ENST00000346436 CRIPTQ9P021 101 aa6.76□□□□□ -1.33
CLCN6-202ENST00000346436 HIVEP1P15822 2718 aa6.76□□□□□ -1.33
CLCN6-202ENST00000346436 FP248Q71RG6 208 aaPredicted RBP6.76□□□□□ -1.33
CLCN6-202ENST00000346436 CAMK2N1Q7Z7J9 78 aa6.76□□□□□ -1.33
CLCN6-202ENST00000346436 MXRA5Q9NR99 2828 aa6.75□□□□□ -1.33
CLCN6-202ENST00000346436 CSAG1Q6PB30 78 aa6.75□□□□□ -1.33
CLCN6-202ENST00000346436 Q5XG85 94 aa6.74□□□□□ -1.33
CLCN6-202ENST00000346436 COA5Q86WW8 74 aa6.74□□□□□ -1.33
CLCN6-202ENST00000346436 KRTAP26-1Q6PEX3 210 aa6.74□□□□□ -1.33
CLCN6-202ENST00000346436 UQCR11O14957 56 aa6.73□□□□□ -1.33
CLCN6-202ENST00000346436 KRTAP10-1P60331 282 aa6.69□□□□□ -1.34
CLCN6-202ENST00000346436 SPINT4Q6UDR6 99 aa6.69□□□□□ -1.34
CLCN6-202ENST00000346436 BSNQ9UPA5 3926 aa6.67□□□□□ -1.34
CLCN6-202ENST00000346436 KRTAP1-5Q9BYS1 174 aa6.67□□□□□ -1.34
CLCN6-202ENST00000346436 Q8N1X5 172 aa6.66□□□□□ -1.34
CLCN6-202ENST00000346436 NBEAL1Q6ZS30 2694 aa6.66□□□□□ -1.34
CLCN6-202ENST00000346436 SPRR1AP35321 89 aa6.66□□□□□ -1.34
CLCN6-202ENST00000346436 NSD1Q96L73 2696 aaPredicted RBP6.65□□□□□ -1.34
CLCN6-202ENST00000346436 ZCCHC13Q8WW36 166 aaKnown RBP6.64□□□□□ -1.35
CLCN6-202ENST00000346436 KRTAP10-2P60368 255 aa6.63□□□□□ -1.35
CLCN6-202ENST00000346436 Q6ZR54 194 aa6.62□□□□□ -1.35
CLCN6-202ENST00000346436 S4R3F8 94 aa6.62□□□□□ -1.35
CLCN6-202ENST00000346436 CYP4F30PQ9H0H9 118 aa6.61□□□□□ -1.35
CLCN6-202ENST00000346436 LINC00483Q53H64 154 aa6.6□□□□□ -1.35
CLCN6-202ENST00000346436 A0A0D9SG42 100 aa6.58□□□□□ -1.36
CLCN6-202ENST00000346436 MIR22HGQ0VDD5 57 aa6.58□□□□□ -1.36
CLCN6-202ENST00000346436 CSMD2Q7Z408 3487 aa6.58□□□□□ -1.36
CLCN6-202ENST00000346436 NIPBLQ6KC79 2804 aaeCLIP6.58□□□□□ -1.36
CLCN6-202ENST00000346436 CDC42SE1Q9NRR8 79 aa6.57□□□□□ -1.36
CLCN6-202ENST00000346436 PLAC4Q8WY50 150 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms