RNA–Protein interactions for RNA: ENST00000344876.8

PCDH18-201, Transcript of protocadherin 18, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDH18, Length 5,906 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH18-201ENST00000344876 M0R2T5 61 aa4.08□□□□□ -1.76
PCDH18-201ENST00000344876 RPL37P61927 97 aaKnown RBP4.08□□□□□ -1.76
PCDH18-201ENST00000344876 PCSK5Q92824 1860 aa4.07□□□□□ -1.76
PCDH18-201ENST00000344876 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.07□□□□□ -1.76
PCDH18-201ENST00000344876 HECTD1Q9ULT8 2610 aa4.07□□□□□ -1.76
PCDH18-201ENST00000344876 MAST4O15021 2626 aa4.06□□□□□ -1.76
PCDH18-201ENST00000344876 FLNBO75369 2602 aaKnown RBP4.06□□□□□ -1.76
PCDH18-201ENST00000344876 A8MUU9 505 aa4.05□□□□□ -1.76
PCDH18-201ENST00000344876 Q8NDZ9 215 aa4.05□□□□□ -1.76
PCDH18-201ENST00000344876 NOTCH2NLQ7Z3S9 236 aa4.05□□□□□ -1.76
PCDH18-201ENST00000344876 A8MU10 97 aa4.04□□□□□ -1.76
PCDH18-201ENST00000344876 UTRNP46939 3433 aa4.04□□□□□ -1.76
PCDH18-201ENST00000344876 MMP24-AS1A0A0U1RRL7 71 aa4.04□□□□□ -1.76
PCDH18-201ENST00000344876 C5orf42Q9H799 3197 aa4.03□□□□□ -1.76
PCDH18-201ENST00000344876 AKAP13Q12802 2813 aa4.03□□□□□ -1.76
PCDH18-201ENST00000344876 PCNTO95613 3336 aa4.03□□□□□ -1.76
PCDH18-201ENST00000344876 CFAP54Q96N23 3096 aa4.02□□□□□ -1.77
PCDH18-201ENST00000344876 S4R3F8 94 aa4.01□□□□□ -1.77
PCDH18-201ENST00000344876 Q5W150 140 aa4.01□□□□□ -1.77
PCDH18-201ENST00000344876 ITPR3Q14573 2671 aa4□□□□□ -1.77
PCDH18-201ENST00000344876 ZCCHC13Q8WW36 166 aaKnown RBP4□□□□□ -1.77
PCDH18-201ENST00000344876 FREM2Q5SZK8 3169 aa3.99□□□□□ -1.77
PCDH18-201ENST00000344876 R4GN34 69 aa3.99□□□□□ -1.77
PCDH18-201ENST00000344876 LAMA2P24043 3122 aaKnown RBP3.98□□□□□ -1.77
PCDH18-201ENST00000344876 A0A0C4DFX4 3053 aa3.96□□□□□ -1.77
PCDH18-201ENST00000344876 PP632Q6XCG6 107 aa3.96□□□□□ -1.78
PCDH18-201ENST00000344876 DMBT1Q9UGM3 2413 aaPredicted RBP3.96□□□□□ -1.78
PCDH18-201ENST00000344876 CHD6Q8TD26 2715 aa3.95□□□□□ -1.78
PCDH18-201ENST00000344876 LINC00472Q9H8W2 130 aa3.94□□□□□ -1.78
PCDH18-201ENST00000344876 STAB1Q9NY15 2570 aa3.94□□□□□ -1.78
PCDH18-201ENST00000344876 M0QZ58 72 aa3.93□□□□□ -1.78
PCDH18-201ENST00000344876 FLNAP21333 2647 aaKnown RBP3.93□□□□□ -1.78
PCDH18-201ENST00000344876 KRTAP1-3Q8IUG1 177 aa3.93□□□□□ -1.78
PCDH18-201ENST00000344876 NBEAL1Q6ZS30 2694 aa3.92□□□□□ -1.78
PCDH18-201ENST00000344876 KRTAP1-1Q07627 177 aa3.91□□□□□ -1.78
PCDH18-201ENST00000344876 KRTAP26-1Q6PEX3 210 aa3.91□□□□□ -1.78
PCDH18-201ENST00000344876 CENPEQ02224 2701 aa3.91□□□□□ -1.78
PCDH18-201ENST00000344876 STAB2Q8WWQ8 2551 aa3.91□□□□□ -1.78
PCDH18-201ENST00000344876 PANO1I0J062 215 aa3.9□□□□□ -1.79
PCDH18-201ENST00000344876 SPRR1AP35321 89 aa3.9□□□□□ -1.79
PCDH18-201ENST00000344876 C10orf95Q9H7T3 257 aa3.89□□□□□ -1.79
PCDH18-201ENST00000344876 KRTAP11-1Q8IUC1 163 aa3.89□□□□□ -1.79
PCDH18-201ENST00000344876 PLAC8Q9NZF1 115 aa3.88□□□□□ -1.79
PCDH18-201ENST00000344876 KRTAP4-16G5E9R7 235 aaPredicted RBP3.88□□□□□ -1.79
PCDH18-201ENST00000344876 KRTAP1-5Q9BYS1 174 aa3.88□□□□□ -1.79
PCDH18-201ENST00000344876 CFAP46Q8IYW2 2715 aa3.88□□□□□ -1.79
PCDH18-201ENST00000344876 NOTCH1P46531 2555 aa3.87□□□□□ -1.79
PCDH18-201ENST00000344876 TEX15Q9BXT5 2789 aa3.85□□□□□ -1.79
PCDH18-201ENST00000344876 SPRR1BP22528 89 aa3.83□□□□□ -1.8
PCDH18-201ENST00000344876 KRTAP10-2P60368 255 aa3.83□□□□□ -1.8
PCDH18-201ENST00000344876 KRTAP10-1P60331 282 aa3.83□□□□□ -1.8
PCDH18-201ENST00000344876 UNC79Q9P2D8 2635 aa3.82□□□□□ -1.8
PCDH18-201ENST00000344876 Q5VSD8 79 aa3.82□□□□□ -1.8
PCDH18-201ENST00000344876 GCN1Q92616 2671 aaKnown RBP3.81□□□□□ -1.8
PCDH18-201ENST00000344876 NBEAL2Q6ZNJ1 2754 aa3.81□□□□□ -1.8
PCDH18-201ENST00000344876 MAP1AP78559 2803 aaPredicted RBP3.8□□□□□ -1.8
PCDH18-201ENST00000344876 TRIOO75962 3097 aa3.8□□□□□ -1.8
PCDH18-201ENST00000344876 MKI67P46013 3256 aaKnown RBP3.8□□□□□ -1.8
PCDH18-201ENST00000344876 TEP1Q99973 2627 aaKnown RBP3.8□□□□□ -1.8
PCDH18-201ENST00000344876 BAHCC1Q9P281 2608 aa3.79□□□□□ -1.8
PCDH18-201ENST00000344876 MGAQ8IWI9 3026 aa3.79□□□□□ -1.8
PCDH18-201ENST00000344876 HELZ2Q9BYK8 2649 aaKnown RBP3.79□□□□□ -1.8
PCDH18-201ENST00000344876 KRTAP29-1A8MX34 341 aaPredicted RBP3.79□□□□□ -1.8
PCDH18-201ENST00000344876 XIRP2A4UGR9 3374 aa3.79□□□□□ -1.8
PCDH18-201ENST00000344876 CELSR3Q9NYQ7 3312 aa3.78□□□□□ -1.8
PCDH18-201ENST00000344876 SETXQ7Z333 2677 aaKnown RBP3.78□□□□□ -1.8
PCDH18-201ENST00000344876 KRTAP23-1A1A580 65 aa3.78□□□□□ -1.8
PCDH18-201ENST00000344876 COL6A5A8TX70 2615 aa3.78□□□□□ -1.8
PCDH18-201ENST00000344876 P0C880 135 aa3.78□□□□□ -1.8
PCDH18-201ENST00000344876 WDFY4Q6ZS81 3184 aa3.78□□□□□ -1.8
PCDH18-201ENST00000344876 LCE6AA0A183 80 aa3.77□□□□□ -1.81
PCDH18-201ENST00000344876 CHD7Q9P2D1 2997 aa3.76□□□□□ -1.81
PCDH18-201ENST00000344876 BRCA2P51587 3418 aa3.76□□□□□ -1.81
PCDH18-201ENST00000344876 FRYQ5TBA9 3013 aa3.76□□□□□ -1.81
PCDH18-201ENST00000344876 VPS13AQ96RL7 3174 aa3.75□□□□□ -1.81
PCDH18-201ENST00000344876 LAMA3Q16787 3333 aa3.75□□□□□ -1.81
PCDH18-201ENST00000344876 UNC80Q8N2C7 3258 aa3.75□□□□□ -1.81
PCDH18-201ENST00000344876 PRUNE2Q8WUY3 3088 aa3.74□□□□□ -1.81
PCDH18-201ENST00000344876 RANBP2P49792 3224 aaKnown RBP3.74□□□□□ -1.81
PCDH18-201ENST00000344876 NSD1Q96L73 2696 aaPredicted RBP3.72□□□□□ -1.81
PCDH18-201ENST00000344876 DMXL2Q8TDJ6 3036 aa3.71□□□□□ -1.82
PCDH18-201ENST00000344876 ASH1LQ9NR48 2969 aaKnown RBP3.7□□□□□ -1.82
PCDH18-201ENST00000344876 KMT2BQ9UMN6 2715 aaPredicted RBP3.7□□□□□ -1.82
PCDH18-201ENST00000344876 TRANK1O15050 2925 aa3.69□□□□□ -1.82
PCDH18-201ENST00000344876 KALRNO60229 2985 aa3.68□□□□□ -1.82
PCDH18-201ENST00000344876 REV3LO60673 3130 aa3.66□□□□□ -1.82
PCDH18-201ENST00000344876 KRTAP7-1Q8IUC3 87 aa3.65□□□□□ -1.82
PCDH18-201ENST00000344876 UBR5O95071 2799 aaPredicted RBP3.65□□□□□ -1.82
PCDH18-201ENST00000344876 DSPP15924 2871 aaKnown RBP3.65□□□□□ -1.83
PCDH18-201ENST00000344876 CFAP47Q6ZTR5 3102 aa3.63□□□□□ -1.83
PCDH18-201ENST00000344876 ZNF292O60281 2723 aa3.63□□□□□ -1.83
PCDH18-201ENST00000344876 KRTAP13-2Q52LG2 175 aa3.62□□□□□ -1.83
PCDH18-201ENST00000344876 TACC2O95359 2948 aa3.62□□□□□ -1.83
PCDH18-201ENST00000344876 DNAH14Q0VDD8 3507 aa3.61□□□□□ -1.83
PCDH18-201ENST00000344876 TNP1P09430 55 aa3.6□□□□□ -1.83
PCDH18-201ENST00000344876 CDH23Q9H251 3354 aa3.6□□□□□ -1.83
PCDH18-201ENST00000344876 INE1O15225 51 aa3.6□□□□□ -1.83
PCDH18-201ENST00000344876 ITPR1Q14643 2758 aa3.6□□□□□ -1.83
PCDH18-201ENST00000344876 IGSF10Q6WRI0 2623 aa3.6□□□□□ -1.83
PCDH18-201ENST00000344876 APCP25054 2843 aa3.59□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms