RNA–Protein interactions for RNA: ENST00000343516.7

CASKIN1-201, Transcript of CASK interacting protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CASKIN1, Length 5,759 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASKIN1-201ENST00000343516 ROMO1P60602 79 aa11.7□□□□□ -0.54
CASKIN1-201ENST00000343516 KRTAP4-16G5E9R7 235 aaPredicted RBP11.69□□□□□ -0.54
CASKIN1-201ENST00000343516 FLNAP21333 2647 aaKnown RBP11.67□□□□□ -0.54
CASKIN1-201ENST00000343516 UTRNP46939 3433 aa11.66□□□□□ -0.54
CASKIN1-201ENST00000343516 HECTD1Q9ULT8 2610 aa11.64□□□□□ -0.55
CASKIN1-201ENST00000343516 H1FX-AS1Q4G0G2 97 aa11.64□□□□□ -0.55
CASKIN1-201ENST00000343516 KRTAP1-5Q9BYS1 174 aa11.58□□□□□ -0.56
CASKIN1-201ENST00000343516 DNAH12Q6ZR08 3092 aa11.57□□□□□ -0.56
CASKIN1-201ENST00000343516 R4GN34 69 aa11.57□□□□□ -0.56
CASKIN1-201ENST00000343516 FLNBO75369 2602 aaKnown RBP11.57□□□□□ -0.56
CASKIN1-201ENST00000343516 ATRQ13535 2644 aa11.57□□□□□ -0.56
CASKIN1-201ENST00000343516 SPATA8Q6RVD6 105 aa11.56□□□□□ -0.56
CASKIN1-201ENST00000343516 ITPR3Q14573 2671 aa11.55□□□□□ -0.56
CASKIN1-201ENST00000343516 LCE6AA0A183 80 aa11.52□□□□□ -0.57
CASKIN1-201ENST00000343516 A6NN06 94 aa11.46□□□□□ -0.58
CASKIN1-201ENST00000343516 CEP350Q5VT06 3117 aa11.42□□□□□ -0.58
CASKIN1-201ENST00000343516 SEC61BP60468 96 aaKnown RBP11.4□□□□□ -0.58
CASKIN1-201ENST00000343516 MAST4O15021 2626 aa11.39□□□□□ -0.59
CASKIN1-201ENST00000343516 M0R2T5 61 aa11.36□□□□□ -0.59
CASKIN1-201ENST00000343516 CHD7Q9P2D1 2997 aa11.35□□□□□ -0.59
CASKIN1-201ENST00000343516 M0QZ58 72 aa11.34□□□□□ -0.59
CASKIN1-201ENST00000343516 KRTAP10-1P60331 282 aa11.33□□□□□ -0.6
CASKIN1-201ENST00000343516 PANO1I0J062 215 aa11.3□□□□□ -0.6
CASKIN1-201ENST00000343516 KRTAP25-1Q3LHN0 102 aa11.3□□□□□ -0.6
CASKIN1-201ENST00000343516 HELZ2Q9BYK8 2649 aaKnown RBP11.29□□□□□ -0.6
CASKIN1-201ENST00000343516 CHD9Q3L8U1 2897 aa11.28□□□□□ -0.6
CASKIN1-201ENST00000343516 A0A087X002 238 aa11.26□□□□□ -0.61
CASKIN1-201ENST00000343516 NOTCH2NLQ7Z3S9 236 aa11.26□□□□□ -0.61
CASKIN1-201ENST00000343516 AKAP13Q12802 2813 aa11.25□□□□□ -0.61
CASKIN1-201ENST00000343516 KRTAP10-2P60368 255 aa11.25□□□□□ -0.61
CASKIN1-201ENST00000343516 RPS29P62273 56 aaKnown RBP11.25□□□□□ -0.61
CASKIN1-201ENST00000343516 STAB1Q9NY15 2570 aa11.24□□□□□ -0.61
CASKIN1-201ENST00000343516 ADM2Q7Z4H4 148 aa11.24□□□□□ -0.61
CASKIN1-201ENST00000343516 NBEAL1Q6ZS30 2694 aa11.24□□□□□ -0.61
CASKIN1-201ENST00000343516 FLG2Q5D862 2391 aaPredicted RBP11.23□□□□□ -0.61
CASKIN1-201ENST00000343516 CHD6Q8TD26 2715 aa11.21□□□□□ -0.61
CASKIN1-201ENST00000343516 KRTAP16-1A8MUX0 517 aa11.21□□□□□ -0.62
CASKIN1-201ENST00000343516 PCNTO95613 3336 aa11.2□□□□□ -0.62
CASKIN1-201ENST00000343516 Q5VSD8 79 aa11.18□□□□□ -0.62
CASKIN1-201ENST00000343516 CFAP46Q8IYW2 2715 aa11.18□□□□□ -0.62
CASKIN1-201ENST00000343516 HTTP42858 3142 aa11.16□□□□□ -0.62
CASKIN1-201ENST00000343516 UNC79Q9P2D8 2635 aa11.16□□□□□ -0.62
CASKIN1-201ENST00000343516 DMBT1Q9UGM3 2413 aaPredicted RBP11.15□□□□□ -0.62
CASKIN1-201ENST00000343516 KRTAP7-1Q8IUC3 87 aa11.12□□□□□ -0.63
CASKIN1-201ENST00000343516 TRANK1O15050 2925 aa11.11□□□□□ -0.63
CASKIN1-201ENST00000343516 KRTAP11-1Q8IUC1 163 aa11.11□□□□□ -0.63
CASKIN1-201ENST00000343516 GCN1Q92616 2671 aaKnown RBP11.1□□□□□ -0.63
CASKIN1-201ENST00000343516 KRTAP13-1Q8IUC0 172 aa11.08□□□□□ -0.64
CASKIN1-201ENST00000343516 CENPEQ02224 2701 aa11.06□□□□□ -0.64
CASKIN1-201ENST00000343516 ZNF292O60281 2723 aa11.05□□□□□ -0.64
CASKIN1-201ENST00000343516 A8MU10 97 aa11.04□□□□□ -0.64
CASKIN1-201ENST00000343516 PLAC4Q8WY50 150 aa11.03□□□□□ -0.64
CASKIN1-201ENST00000343516 Q6ZRN7 208 aaPredicted RBP11.03□□□□□ -0.64
CASKIN1-201ENST00000343516 RANBP2P49792 3224 aaKnown RBP11□□□□□ -0.65
CASKIN1-201ENST00000343516 C5orf42Q9H799 3197 aa10.98□□□□□ -0.65
CASKIN1-201ENST00000343516 NOTCH1P46531 2555 aa10.97□□□□□ -0.65
CASKIN1-201ENST00000343516 TEX15Q9BXT5 2789 aa10.96□□□□□ -0.65
CASKIN1-201ENST00000343516 KRTAP13-2Q52LG2 175 aa10.92□□□□□ -0.66
CASKIN1-201ENST00000343516 A8MUU9 505 aa10.9□□□□□ -0.66
CASKIN1-201ENST00000343516 TEP1Q99973 2627 aaKnown RBP10.89□□□□□ -0.67
CASKIN1-201ENST00000343516 NDUFAF8A1L188 74 aa10.88□□□□□ -0.67
CASKIN1-201ENST00000343516 CFAP54Q96N23 3096 aa10.82□□□□□ -0.68
CASKIN1-201ENST00000343516 MKI67P46013 3256 aaKnown RBP10.81□□□□□ -0.68
CASKIN1-201ENST00000343516 NBEAL2Q6ZNJ1 2754 aa10.81□□□□□ -0.68
CASKIN1-201ENST00000343516 A0A0C4DFX4 3053 aa10.81□□□□□ -0.68
CASKIN1-201ENST00000343516 LAMA3Q16787 3333 aa10.8□□□□□ -0.68
CASKIN1-201ENST00000343516 COL6A5A8TX70 2615 aa10.8□□□□□ -0.68
CASKIN1-201ENST00000343516 MGAQ8IWI9 3026 aa10.79□□□□□ -0.68
CASKIN1-201ENST00000343516 C20orf166-AS1Q96NR2 134 aa10.75□□□□□ -0.69
CASKIN1-201ENST00000343516 BRCA2P51587 3418 aa10.75□□□□□ -0.69
CASKIN1-201ENST00000343516 STAB2Q8WWQ8 2551 aa10.74□□□□□ -0.69
CASKIN1-201ENST00000343516 SETXQ7Z333 2677 aaKnown RBP10.74□□□□□ -0.69
CASKIN1-201ENST00000343516 NSD1Q96L73 2696 aaPredicted RBP10.65□□□□□ -0.71
CASKIN1-201ENST00000343516 TNP1P09430 55 aa10.64□□□□□ -0.71
CASKIN1-201ENST00000343516 PP632Q6XCG6 107 aa10.6□□□□□ -0.71
CASKIN1-201ENST00000343516 UBR5O95071 2799 aaPredicted RBP10.59□□□□□ -0.71
CASKIN1-201ENST00000343516 PRUNE2Q8WUY3 3088 aa10.59□□□□□ -0.71
CASKIN1-201ENST00000343516 IGSF10Q6WRI0 2623 aa10.58□□□□□ -0.72
CASKIN1-201ENST00000343516 LAMA2P24043 3122 aaKnown RBP10.54□□□□□ -0.72
CASKIN1-201ENST00000343516 MAP1AP78559 2803 aaPredicted RBP10.54□□□□□ -0.72
CASKIN1-201ENST00000343516 DSPP15924 2871 aaKnown RBP10.53□□□□□ -0.72
CASKIN1-201ENST00000343516 BAHCC1Q9P281 2608 aa10.49□□□□□ -0.73
CASKIN1-201ENST00000343516 WDFY4Q6ZS81 3184 aa10.47□□□□□ -0.73
CASKIN1-201ENST00000343516 C10orf95Q9H7T3 257 aa10.46□□□□□ -0.73
CASKIN1-201ENST00000343516 H0YAA0 97 aa10.45□□□□□ -0.74
CASKIN1-201ENST00000343516 KMT2BQ9UMN6 2715 aaPredicted RBP10.44□□□□□ -0.74
CASKIN1-201ENST00000343516 UNC80Q8N2C7 3258 aa10.44□□□□□ -0.74
CASKIN1-201ENST00000343516 FRYQ5TBA9 3013 aa10.42□□□□□ -0.74
CASKIN1-201ENST00000343516 ITPR2Q14571 2701 aa10.41□□□□□ -0.74
CASKIN1-201ENST00000343516 KRTAP1-4P0C5Y4 121 aa10.37□□□□□ -0.75
CASKIN1-201ENST00000343516 ITPR1Q14643 2758 aa10.37□□□□□ -0.75
CASKIN1-201ENST00000343516 P0C880 135 aa10.37□□□□□ -0.75
CASKIN1-201ENST00000343516 TRIOO75962 3097 aa10.33□□□□□ -0.76
CASKIN1-201ENST00000343516 XIRP2A4UGR9 3374 aa10.32□□□□□ -0.76
CASKIN1-201ENST00000343516 APCP25054 2843 aa10.32□□□□□ -0.76
CASKIN1-201ENST00000343516 XP32Q5T750 250 aa10.27□□□□□ -0.77
CASKIN1-201ENST00000343516 KALRNO60229 2985 aa10.23□□□□□ -0.77
CASKIN1-201ENST00000343516 CDH23Q9H251 3354 aa10.22□□□□□ -0.77
CASKIN1-201ENST00000343516 VPS13AQ96RL7 3174 aa10.21□□□□□ -0.77
CASKIN1-201ENST00000343516 FLNCQ14315 2725 aa10.21□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms