RNA–Protein interactions for RNA: ENST00000340417.7

LIN54-201, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN54, Length 6,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-201ENST00000340417 BOD1L1Q8NFC6 3051 aa7.97□□□□□ -1.13
LIN54-201ENST00000340417 KMT2BQ9UMN6 2715 aaPredicted RBP7.97□□□□□ -1.13
LIN54-201ENST00000340417 V9GYY9 64 aa7.96□□□□□ -1.13
LIN54-201ENST00000340417 TACC2O95359 2948 aa7.95□□□□□ -1.14
LIN54-201ENST00000340417 TRAV22A0A0B4J277 110 aa7.95□□□□□ -1.14
LIN54-201ENST00000340417 CD164Q04900 197 aa7.95□□□□□ -1.14
LIN54-201ENST00000340417 DNAH14Q0VDD8 3507 aa7.94□□□□□ -1.14
LIN54-201ENST00000340417 NBEAQ8NFP9 2946 aa7.94□□□□□ -1.14
LIN54-201ENST00000340417 K7EQZ3 153 aa7.94□□□□□ -1.14
LIN54-201ENST00000340417 TENM4Q6N022 2769 aa7.93□□□□□ -1.14
LIN54-201ENST00000340417 USP34Q70CQ2 3546 aa7.93□□□□□ -1.14
LIN54-201ENST00000340417 ACYP2P14621 99 aa7.92□□□□□ -1.14
LIN54-201ENST00000340417 TMEM254Q8TBM7 123 aa7.92□□□□□ -1.14
LIN54-201ENST00000340417 A0A0U1RQV1 116 aa7.92□□□□□ -1.14
LIN54-201ENST00000340417 NSD1Q96L73 2696 aaPredicted RBP7.92□□□□□ -1.14
LIN54-201ENST00000340417 LOC101927531A0A1B0GV80 90 aa7.91□□□□□ -1.14
LIN54-201ENST00000340417 PRR15Q8IV56 129 aa7.91□□□□□ -1.14
LIN54-201ENST00000340417 FREM2Q5SZK8 3169 aa7.89□□□□□ -1.15
LIN54-201ENST00000340417 OXTP01178 125 aa7.89□□□□□ -1.15
LIN54-201ENST00000340417 KRTAP26-1Q6PEX3 210 aa7.88□□□□□ -1.15
LIN54-201ENST00000340417 FAM104AQ969W3 186 aa7.88□□□□□ -1.15
LIN54-201ENST00000340417 CRYBG3Q68DQ2 2970 aa7.87□□□□□ -1.15
LIN54-201ENST00000340417 A6NED7 52 aa7.87□□□□□ -1.15
LIN54-201ENST00000340417 KALRNO60229 2985 aa7.87□□□□□ -1.15
LIN54-201ENST00000340417 SMCPP49901 116 aaPredicted RBP7.87□□□□□ -1.15
LIN54-201ENST00000340417 H3BPC8 53 aa7.86□□□□□ -1.15
LIN54-201ENST00000340417 SEC61BP60468 96 aaKnown RBP7.86□□□□□ -1.15
LIN54-201ENST00000340417 SVIPQ8NHG7 77 aa7.83□□□□□ -1.16
LIN54-201ENST00000340417 A0A1W2PNM2 257 aa7.82□□□□□ -1.16
LIN54-201ENST00000340417 BRK1Q8WUW1 75 aa7.82□□□□□ -1.16
LIN54-201ENST00000340417 ADGRG4Q8IZF6 3080 aa7.81□□□□□ -1.16
LIN54-201ENST00000340417 LRBAP50851 2863 aa7.81□□□□□ -1.16
LIN54-201ENST00000340417 IGLV5-48A0A075B6I7 105 aa7.81□□□□□ -1.16
LIN54-201ENST00000340417 PANO1I0J062 215 aa7.8□□□□□ -1.16
LIN54-201ENST00000340417 CCDC179H3BU77 68 aa7.8□□□□□ -1.16
LIN54-201ENST00000340417 STAB2Q8WWQ8 2551 aa7.79□□□□□ -1.16
LIN54-201ENST00000340417 Q6ZRN7 208 aaPredicted RBP7.79□□□□□ -1.16
LIN54-201ENST00000340417 PRO0461Q9UI25 63 aa7.79□□□□□ -1.16
LIN54-201ENST00000340417 NBEAL2Q6ZNJ1 2754 aa7.79□□□□□ -1.16
LIN54-201ENST00000340417 ZZEF1O43149 2961 aa7.77□□□□□ -1.17
LIN54-201ENST00000340417 Q8N1X5 172 aa7.77□□□□□ -1.17
LIN54-201ENST00000340417 SPRR1AP35321 89 aa7.77□□□□□ -1.17
LIN54-201ENST00000340417 A0A1B0GU69 56 aa7.76□□□□□ -1.17
LIN54-201ENST00000340417 IGLV8-61A0A075B6I0 122 aa7.74□□□□□ -1.17
LIN54-201ENST00000340417 Q8NDZ9 215 aa7.72□□□□□ -1.17
LIN54-201ENST00000340417 FP248Q71RG6 208 aaPredicted RBP7.7□□□□□ -1.18
LIN54-201ENST00000340417 SPRR1BP22528 89 aa7.67□□□□□ -1.18
LIN54-201ENST00000340417 SMIM26A0A096LP01 95 aa7.66□□□□□ -1.18
LIN54-201ENST00000340417 CFAP47Q6ZTR5 3102 aa7.66□□□□□ -1.18
LIN54-201ENST00000340417 SPEGQ15772 3267 aa7.66□□□□□ -1.18
LIN54-201ENST00000340417 ASH1LQ9NR48 2969 aaKnown RBP7.65□□□□□ -1.18
LIN54-201ENST00000340417 MYO15AQ9UKN7 3530 aa7.64□□□□□ -1.19
LIN54-201ENST00000340417 PSPHP1O15172 72 aa7.63□□□□□ -1.19
LIN54-201ENST00000340417 LINC01554Q52M75 96 aa7.63□□□□□ -1.19
LIN54-201ENST00000340417 ZCCHC13Q8WW36 166 aaKnown RBP7.63□□□□□ -1.19
LIN54-201ENST00000340417 CELSR2Q9HCU4 2923 aa7.62□□□□□ -1.19
LIN54-201ENST00000340417 LINC00483Q53H64 154 aa7.61□□□□□ -1.19
LIN54-201ENST00000340417 A0A087X002 238 aa7.61□□□□□ -1.19
LIN54-201ENST00000340417 C1orf195Q5TG92 126 aa7.59□□□□□ -1.19
LIN54-201ENST00000340417 LOC400499M0QZD8 3231 aa7.59□□□□□ -1.19
LIN54-201ENST00000340417 NIPBLQ6KC79 2804 aaeCLIP7.59□□□□□ -1.19
LIN54-201ENST00000340417 ZANQ9Y493 2812 aa7.57□□□□□ -1.2
LIN54-201ENST00000340417 C4orf26Q17RF5 130 aa7.55□□□□□ -1.2
LIN54-201ENST00000340417 HRNRQ86YZ3 2850 aaPredicted RBP7.54□□□□□ -1.2
LIN54-201ENST00000340417 COA5Q86WW8 74 aa7.54□□□□□ -1.2
LIN54-201ENST00000340417 LINC01600Q96MT4 127 aa7.52□□□□□ -1.21
LIN54-201ENST00000340417 SPINK7P58062 85 aa7.52□□□□□ -1.21
LIN54-201ENST00000340417 CSAG1Q6PB30 78 aa7.52□□□□□ -1.21
LIN54-201ENST00000340417 S4R3F8 94 aa7.5□□□□□ -1.21
LIN54-201ENST00000340417 KRTAP11-1Q8IUC1 163 aa7.49□□□□□ -1.21
LIN54-201ENST00000340417 MMP24-AS1A0A0U1RRL7 71 aa7.47□□□□□ -1.21
LIN54-201ENST00000340417 KRTAP4-16G5E9R7 235 aaPredicted RBP7.47□□□□□ -1.21
LIN54-201ENST00000340417 DMBT1Q9UGM3 2413 aaPredicted RBP7.47□□□□□ -1.21
LIN54-201ENST00000340417 DCHS2Q6V1P9 2916 aa7.47□□□□□ -1.21
LIN54-201ENST00000340417 LINC00472Q9H8W2 130 aa7.46□□□□□ -1.21
LIN54-201ENST00000340417 NF1P21359 2839 aa7.44□□□□□ -1.22
LIN54-201ENST00000340417 A8MUN3 132 aa7.44□□□□□ -1.22
LIN54-201ENST00000340417 RPS29P62273 56 aaKnown RBP7.44□□□□□ -1.22
LIN54-201ENST00000340417 SPINT4Q6UDR6 99 aa7.42□□□□□ -1.22
LIN54-201ENST00000340417 FBN2P35556 2912 aa7.42□□□□□ -1.22
LIN54-201ENST00000340417 A0A0D9SG42 100 aa7.42□□□□□ -1.22
LIN54-201ENST00000340417 HRES1P13985 223 aa7.41□□□□□ -1.22
LIN54-201ENST00000340417 PDZD2O15018 2839 aa7.4□□□□□ -1.23
LIN54-201ENST00000340417 MXRA5Q9NR99 2828 aa7.39□□□□□ -1.23
LIN54-201ENST00000340417 KRTAP13-2Q52LG2 175 aa7.39□□□□□ -1.23
LIN54-201ENST00000340417 RELNP78509 3460 aa7.38□□□□□ -1.23
LIN54-201ENST00000340417 Q5W150 140 aa7.38□□□□□ -1.23
LIN54-201ENST00000340417 KRTAP7-1Q8IUC3 87 aa7.38□□□□□ -1.23
LIN54-201ENST00000340417 DCHS1Q96JQ0 3298 aa7.38□□□□□ -1.23
LIN54-201ENST00000340417 NBPF19A0A087WUL8 3843 aa7.38□□□□□ -1.23
LIN54-201ENST00000340417 CAMK2N1Q7Z7J9 78 aa7.38□□□□□ -1.23
LIN54-201ENST00000340417 PMAIP1Q13794 54 aa7.38□□□□□ -1.23
LIN54-201ENST00000340417 UQCR11O14957 56 aa7.37□□□□□ -1.23
LIN54-201ENST00000340417 FLG2Q5D862 2391 aaPredicted RBP7.37□□□□□ -1.23
LIN54-201ENST00000340417 Q8N9P0 234 aaPredicted RBP7.36□□□□□ -1.23
LIN54-201ENST00000340417 CYP4F30PQ9H0H9 118 aa7.34□□□□□ -1.23
LIN54-201ENST00000340417 TENM2Q9NT68 2774 aa7.34□□□□□ -1.23
LIN54-201ENST00000340417 MUC3AQ02505 3323 aa7.33□□□□□ -1.24
LIN54-201ENST00000340417 KRTAP13-1Q8IUC0 172 aa7.31□□□□□ -1.24
LIN54-201ENST00000340417 SPANXA2-OT1Q8N9U9 137 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 111.5 ms