RNA–Protein interactions for RNA: ENST00000340058.5

RET-201, Transcript of ret proto-oncogene, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RET, Length 4,149 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RET-201ENST00000340058 TENM1Q9UKZ4 2725 aa9.44□□□□□ -0.9
RET-201ENST00000340058 hDV103S1A0JD37 113 aa9.43□□□□□ -0.9
RET-201ENST00000340058 DMBT1Q9UGM3 2413 aaPredicted RBP9.43□□□□□ -0.9
RET-201ENST00000340058 SMR3BP02814 79 aaPredicted RBP9.43□□□□□ -0.9
RET-201ENST00000340058 A6NED7 52 aa9.42□□□□□ -0.9
RET-201ENST00000340058 PKD1L1Q8TDX9 2849 aa9.42□□□□□ -0.9
RET-201ENST00000340058 WIPF1O43516 503 aa9.42□□□□□ -0.9
RET-201ENST00000340058 ATP5EP56381 51 aaPredicted RBP9.42□□□□□ -0.9
RET-201ENST00000340058 A0A1W2PNM2 257 aa9.41□□□□□ -0.9
RET-201ENST00000340058 SEC61GP60059 68 aa9.39□□□□□ -0.91
RET-201ENST00000340058 TLX1NBP0CAT3 122 aa9.38□□□□□ -0.91
RET-201ENST00000340058 TENM3Q9P273 2699 aa9.38□□□□□ -0.91
RET-201ENST00000340058 KRTAP1-5Q9BYS1 174 aa9.37□□□□□ -0.91
RET-201ENST00000340058 PSORS1C2Q9UIG4 136 aa9.37□□□□□ -0.91
RET-201ENST00000340058 PRR15LQ9BU68 103 aa9.37□□□□□ -0.91
RET-201ENST00000340058 OTOGQ6ZRI0 2925 aa9.37□□□□□ -0.91
RET-201ENST00000340058 CSMD2Q7Z408 3487 aa9.36□□□□□ -0.91
RET-201ENST00000340058 OBSCN-AS1Q96MR7 158 aa9.36□□□□□ -0.91
RET-201ENST00000340058 ZFHX3Q15911 3703 aa9.36□□□□□ -0.91
RET-201ENST00000340058 VWFP04275 2813 aa9.36□□□□□ -0.91
RET-201ENST00000340058 TNP2Q05952 138 aa9.34□□□□□ -0.91
RET-201ENST00000340058 PLA2G1BP04054 148 aaKnown RBP9.34□□□□□ -0.91
RET-201ENST00000340058 TYMSOSQ8TAI1 123 aa9.34□□□□□ -0.91
RET-201ENST00000340058 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.34□□□□□ -0.91
RET-201ENST00000340058 C4orf26Q17RF5 130 aa9.31□□□□□ -0.92
RET-201ENST00000340058 ZNF861PO60384 105 aa9.31□□□□□ -0.92
RET-201ENST00000340058 CNBPP62633 177 aaKnown RBP9.31□□□□□ -0.92
RET-201ENST00000340058 PDZD2O15018 2839 aa9.3□□□□□ -0.92
RET-201ENST00000340058 TRAV22A0A0B4J277 110 aa9.29□□□□□ -0.92
RET-201ENST00000340058 PLA2G2DQ9UNK4 145 aa9.29□□□□□ -0.92
RET-201ENST00000340058 A8MWP4 228 aa9.28□□□□□ -0.92
RET-201ENST00000340058 A0A1B0GW54 56 aa9.28□□□□□ -0.92
RET-201ENST00000340058 LIMD2Q9BT23 127 aa9.28□□□□□ -0.92
RET-201ENST00000340058 FLG2Q5D862 2391 aaPredicted RBP9.26□□□□□ -0.93
RET-201ENST00000340058 V9GYY9 64 aa9.26□□□□□ -0.93
RET-201ENST00000340058 NBPF19A0A087WUL8 3843 aa9.25□□□□□ -0.93
RET-201ENST00000340058 KRTAP26-1Q6PEX3 210 aa9.25□□□□□ -0.93
RET-201ENST00000340058 SPENQ96T58 3664 aaKnown RBP9.25□□□□□ -0.93
RET-201ENST00000340058 LINC00313P59037 77 aa9.24□□□□□ -0.93
RET-201ENST00000340058 DSCR10P59022 87 aa9.24□□□□□ -0.93
RET-201ENST00000340058 PRR15Q8IV56 129 aa9.24□□□□□ -0.93
RET-201ENST00000340058 SPAG11AQ6PDA7 123 aa9.23□□□□□ -0.93
RET-201ENST00000340058 IGLV5-48A0A075B6I7 105 aa9.23□□□□□ -0.93
RET-201ENST00000340058 SPRR4Q96PI1 79 aa9.23□□□□□ -0.93
RET-201ENST00000340058 Q96NJ1 140 aa9.21□□□□□ -0.93
RET-201ENST00000340058 IGLV7-43P04211 117 aa9.21□□□□□ -0.94
RET-201ENST00000340058 TP53AIP1Q9HCN2 124 aa9.19□□□□□ -0.94
RET-201ENST00000340058 C8orf17Q9NRJ1 99 aa9.18□□□□□ -0.94
RET-201ENST00000340058 IGLV5-37A0A075B6J1 123 aa9.18□□□□□ -0.94
RET-201ENST00000340058 LINC01600Q96MT4 127 aa9.18□□□□□ -0.94
RET-201ENST00000340058 H7BZZ5 65 aa9.18□□□□□ -0.94
RET-201ENST00000340058 MRPL34Q9BQ48 92 aaKnown RBP9.18□□□□□ -0.94
RET-201ENST00000340058 FAM229AH3BQW9 127 aa9.16□□□□□ -0.94
RET-201ENST00000340058 PMAIP1Q13794 54 aa9.16□□□□□ -0.94
RET-201ENST00000340058 IGLV8-61A0A075B6I0 122 aa9.15□□□□□ -0.94
RET-201ENST00000340058 C7orf65Q6ZTY9 151 aa9.15□□□□□ -0.94
RET-201ENST00000340058 C9orf92A6NGG3 77 aa9.15□□□□□ -0.95
RET-201ENST00000340058 RPS28P62857 69 aaKnown RBP9.14□□□□□ -0.95
RET-201ENST00000340058 KLKP1Q107X0 134 aa9.14□□□□□ -0.95
RET-201ENST00000340058 PANO1I0J062 215 aa9.13□□□□□ -0.95
RET-201ENST00000340058 A0A1B0GVX0 72 aa9.13□□□□□ -0.95
RET-201ENST00000340058 CYSTM1Q9H1C7 97 aa9.12□□□□□ -0.95
RET-201ENST00000340058 SSBP3-AS1Q7Z2R9 100 aa9.1□□□□□ -0.95
RET-201ENST00000340058 C1orf195Q5TG92 126 aa9.09□□□□□ -0.95
RET-201ENST00000340058 SPRR1AP35321 89 aa9.09□□□□□ -0.95
RET-201ENST00000340058 A8MUN3 132 aa9.08□□□□□ -0.96
RET-201ENST00000340058 TENM2Q9NT68 2774 aa9.07□□□□□ -0.96
RET-201ENST00000340058 LINC00304Q8N9R0 145 aa9.07□□□□□ -0.96
RET-201ENST00000340058 TGP01266 2768 aa9.06□□□□□ -0.96
RET-201ENST00000340058 OCR1Q9BZK8 76 aa9.04□□□□□ -0.96
RET-201ENST00000340058 ACYP2P14621 99 aa9.04□□□□□ -0.96
RET-201ENST00000340058 COA5Q86WW8 74 aa9.03□□□□□ -0.96
RET-201ENST00000340058 H3BPC8 53 aa9.03□□□□□ -0.96
RET-201ENST00000340058 PRR26Q8N8Z3 221 aa9.02□□□□□ -0.97
RET-201ENST00000340058 K7ERS5 55 aa9.02□□□□□ -0.97
RET-201ENST00000340058 A0A1B0GU69 56 aa9.01□□□□□ -0.97
RET-201ENST00000340058 KRTAP10-2P60368 255 aa9.01□□□□□ -0.97
RET-201ENST00000340058 SRRM2Q9UQ35 2752 aaKnown RBP9□□□□□ -0.97
RET-201ENST00000340058 LOC101927531A0A1B0GV80 90 aa9□□□□□ -0.97
RET-201ENST00000340058 PRO0628Q9UI54 55 aa9□□□□□ -0.97
RET-201ENST00000340058 LINC00336Q6ZUF6 198 aa8.99□□□□□ -0.97
RET-201ENST00000340058 C8orf87E5RJ46 101 aa8.99□□□□□ -0.97
RET-201ENST00000340058 KRTAP11-1Q8IUC1 163 aa8.97□□□□□ -0.97
RET-201ENST00000340058 PLAC8Q9NZF1 115 aa8.95□□□□□ -0.98
RET-201ENST00000340058 Q8N1X5 172 aa8.93□□□□□ -0.98
RET-201ENST00000340058 KRTAP10-1P60331 282 aa8.93□□□□□ -0.98
RET-201ENST00000340058 KRTAP4-16G5E9R7 235 aaPredicted RBP8.92□□□□□ -0.98
RET-201ENST00000340058 KRTAP7-1Q8IUC3 87 aa8.92□□□□□ -0.98
RET-201ENST00000340058 ATP11AUNQ6ZP68 121 aa8.91□□□□□ -0.98
RET-201ENST00000340058 OXTP01178 125 aa8.89□□□□□ -0.99
RET-201ENST00000340058 MMP24-AS1A0A0U1RRL7 71 aa8.87□□□□□ -0.99
RET-201ENST00000340058 LINC00472Q9H8W2 130 aa8.86□□□□□ -0.99
RET-201ENST00000340058 BSNQ9UPA5 3926 aa8.86□□□□□ -0.99
RET-201ENST00000340058 Q8N9P0 234 aaPredicted RBP8.84□□□□□ -0.99
RET-201ENST00000340058 J3QL48 77 aa8.83□□□□□ -1
RET-201ENST00000340058 SPRR1BP22528 89 aa8.83□□□□□ -1
RET-201ENST00000340058 Q5XG85 94 aa8.82□□□□□ -1
RET-201ENST00000340058 Q6ZR54 194 aa8.81□□□□□ -1
RET-201ENST00000340058 FAM229BQ4G0N7 80 aa8.8□□□□□ -1
RET-201ENST00000340058 TRRAPQ9Y4A5 3859 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms