RNA–Protein interactions for RNA: ENST00000335762.9

CACNA1C-202, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1C, Length 6,968 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-202ENST00000335762 COL4A2P08572 1712 aa6.43□□□□□ -1.38
CACNA1C-202ENST00000335762 CEP350Q5VT06 3117 aa6.43□□□□□ -1.38
CACNA1C-202ENST00000335762 LINC00472Q9H8W2 130 aa6.42□□□□□ -1.38
CACNA1C-202ENST00000335762 C5orf42Q9H799 3197 aa6.42□□□□□ -1.38
CACNA1C-202ENST00000335762 AKAP13Q12802 2813 aa6.41□□□□□ -1.38
CACNA1C-202ENST00000335762 DMBT1Q9UGM3 2413 aaPredicted RBP6.4□□□□□ -1.38
CACNA1C-202ENST00000335762 M0QZ58 72 aa6.4□□□□□ -1.39
CACNA1C-202ENST00000335762 SPRR1AP35321 89 aa6.4□□□□□ -1.39
CACNA1C-202ENST00000335762 STAB2Q8WWQ8 2551 aa6.39□□□□□ -1.39
CACNA1C-202ENST00000335762 XIRP2A4UGR9 3374 aa6.38□□□□□ -1.39
CACNA1C-202ENST00000335762 DNAH12Q6ZR08 3092 aa6.38□□□□□ -1.39
CACNA1C-202ENST00000335762 SPRR1BP22528 89 aa6.37□□□□□ -1.39
CACNA1C-202ENST00000335762 PLAC8Q9NZF1 115 aa6.37□□□□□ -1.39
CACNA1C-202ENST00000335762 ASB16-AS1Q495Z4 193 aa6.37□□□□□ -1.39
CACNA1C-202ENST00000335762 SEC61BP60468 96 aaKnown RBP6.35□□□□□ -1.39
CACNA1C-202ENST00000335762 PLAC4Q8WY50 150 aa6.34□□□□□ -1.39
CACNA1C-202ENST00000335762 OXTP01178 125 aa6.34□□□□□ -1.39
CACNA1C-202ENST00000335762 Q8NDZ9 215 aa6.34□□□□□ -1.39
CACNA1C-202ENST00000335762 ITPR3Q14573 2671 aa6.33□□□□□ -1.4
CACNA1C-202ENST00000335762 BAHCC1Q9P281 2608 aa6.33□□□□□ -1.4
CACNA1C-202ENST00000335762 PCSK5Q92824 1860 aa6.33□□□□□ -1.4
CACNA1C-202ENST00000335762 SETXQ7Z333 2677 aaKnown RBP6.31□□□□□ -1.4
CACNA1C-202ENST00000335762 SPATA8Q6RVD6 105 aa6.31□□□□□ -1.4
CACNA1C-202ENST00000335762 NBEAL1Q6ZS30 2694 aa6.3□□□□□ -1.4
CACNA1C-202ENST00000335762 KRTAP26-1Q6PEX3 210 aa6.29□□□□□ -1.4
CACNA1C-202ENST00000335762 BRCA2P51587 3418 aa6.27□□□□□ -1.41
CACNA1C-202ENST00000335762 CENPEQ02224 2701 aa6.26□□□□□ -1.41
CACNA1C-202ENST00000335762 ADM2Q7Z4H4 148 aa6.26□□□□□ -1.41
CACNA1C-202ENST00000335762 USP34Q70CQ2 3546 aa6.25□□□□□ -1.41
CACNA1C-202ENST00000335762 Q6ZR54 194 aa6.24□□□□□ -1.41
CACNA1C-202ENST00000335762 KRTAP1-1Q07627 177 aa6.22□□□□□ -1.41
CACNA1C-202ENST00000335762 KRTAP25-1Q3LHN0 102 aa6.21□□□□□ -1.42
CACNA1C-202ENST00000335762 KRTAP1-3Q8IUG1 177 aa6.21□□□□□ -1.42
CACNA1C-202ENST00000335762 PANO1I0J062 215 aa6.21□□□□□ -1.42
CACNA1C-202ENST00000335762 C20orf166-AS1Q96NR2 134 aa6.2□□□□□ -1.42
CACNA1C-202ENST00000335762 NOTCH1P46531 2555 aa6.2□□□□□ -1.42
CACNA1C-202ENST00000335762 NDUFAF8A1L188 74 aa6.19□□□□□ -1.42
CACNA1C-202ENST00000335762 FLNAP21333 2647 aaKnown RBP6.19□□□□□ -1.42
CACNA1C-202ENST00000335762 KRTAP29-1A8MX34 341 aaPredicted RBP6.17□□□□□ -1.42
CACNA1C-202ENST00000335762 CFAP46Q8IYW2 2715 aa6.17□□□□□ -1.42
CACNA1C-202ENST00000335762 SZT2Q5T011 3432 aa6.16□□□□□ -1.42
CACNA1C-202ENST00000335762 MKI67P46013 3256 aaKnown RBP6.16□□□□□ -1.42
CACNA1C-202ENST00000335762 A6NN06 94 aa6.15□□□□□ -1.42
CACNA1C-202ENST00000335762 CHD6Q8TD26 2715 aa6.14□□□□□ -1.43
CACNA1C-202ENST00000335762 TEP1Q99973 2627 aaKnown RBP6.13□□□□□ -1.43
CACNA1C-202ENST00000335762 KRTAP1-5Q9BYS1 174 aa6.13□□□□□ -1.43
CACNA1C-202ENST00000335762 A8MU10 97 aa6.12□□□□□ -1.43
CACNA1C-202ENST00000335762 KRTAP10-1P60331 282 aa6.1□□□□□ -1.43
CACNA1C-202ENST00000335762 LAMA2P24043 3122 aaKnown RBP6.1□□□□□ -1.43
CACNA1C-202ENST00000335762 TEX15Q9BXT5 2789 aa6.09□□□□□ -1.43
CACNA1C-202ENST00000335762 HELZ2Q9BYK8 2649 aaKnown RBP6.08□□□□□ -1.44
CACNA1C-202ENST00000335762 CELSR3Q9NYQ7 3312 aa6.08□□□□□ -1.44
CACNA1C-202ENST00000335762 LAMA3Q16787 3333 aa6.08□□□□□ -1.44
CACNA1C-202ENST00000335762 COL6A5A8TX70 2615 aa6.07□□□□□ -1.44
CACNA1C-202ENST00000335762 UNC79Q9P2D8 2635 aa6.07□□□□□ -1.44
CACNA1C-202ENST00000335762 CFAP54Q96N23 3096 aa6.06□□□□□ -1.44
CACNA1C-202ENST00000335762 KRTAP4-16G5E9R7 235 aaPredicted RBP6.06□□□□□ -1.44
CACNA1C-202ENST00000335762 A8MUU9 505 aa6.06□□□□□ -1.44
CACNA1C-202ENST00000335762 KRTAP10-2P60368 255 aa6.05□□□□□ -1.44
CACNA1C-202ENST00000335762 A0A087X002 238 aa6.05□□□□□ -1.44
CACNA1C-202ENST00000335762 NOTCH2NLQ7Z3S9 236 aa6.05□□□□□ -1.44
CACNA1C-202ENST00000335762 MAP1AP78559 2803 aaPredicted RBP6.04□□□□□ -1.44
CACNA1C-202ENST00000335762 CDH23Q9H251 3354 aa6.02□□□□□ -1.45
CACNA1C-202ENST00000335762 DNAH14Q0VDD8 3507 aa6.02□□□□□ -1.45
CACNA1C-202ENST00000335762 PRUNE2Q8WUY3 3088 aa6.01□□□□□ -1.45
CACNA1C-202ENST00000335762 C10orf95Q9H7T3 257 aa5.99□□□□□ -1.45
CACNA1C-202ENST00000335762 TNP1P09430 55 aa5.99□□□□□ -1.45
CACNA1C-202ENST00000335762 A0A0C4DFX4 3053 aa5.99□□□□□ -1.45
CACNA1C-202ENST00000335762 LCE6AA0A183 80 aa5.99□□□□□ -1.45
CACNA1C-202ENST00000335762 FREM2Q5SZK8 3169 aa5.98□□□□□ -1.45
CACNA1C-202ENST00000335762 EYSQ5T1H1 3165 aa5.97□□□□□ -1.45
CACNA1C-202ENST00000335762 VCANP13611 3396 aa5.96□□□□□ -1.46
CACNA1C-202ENST00000335762 KRTAP11-1Q8IUC1 163 aa5.94□□□□□ -1.46
CACNA1C-202ENST00000335762 SPTBN5Q9NRC6 3674 aaKnown RBP5.94□□□□□ -1.46
CACNA1C-202ENST00000335762 TRIOO75962 3097 aa5.93□□□□□ -1.46
CACNA1C-202ENST00000335762 KMT2BQ9UMN6 2715 aaPredicted RBP5.92□□□□□ -1.46
CACNA1C-202ENST00000335762 RPS29P62273 56 aaKnown RBP5.91□□□□□ -1.46
CACNA1C-202ENST00000335762 MYO15AQ9UKN7 3530 aa5.91□□□□□ -1.46
CACNA1C-202ENST00000335762 IGSF10Q6WRI0 2623 aa5.9□□□□□ -1.47
CACNA1C-202ENST00000335762 GCN1Q92616 2671 aaKnown RBP5.9□□□□□ -1.47
CACNA1C-202ENST00000335762 RANBP2P49792 3224 aaKnown RBP5.88□□□□□ -1.47
CACNA1C-202ENST00000335762 REV3LO60673 3130 aa5.88□□□□□ -1.47
CACNA1C-202ENST00000335762 UNC80Q8N2C7 3258 aa5.87□□□□□ -1.47
CACNA1C-202ENST00000335762 SPEGQ15772 3267 aa5.84□□□□□ -1.47
CACNA1C-202ENST00000335762 PP632Q6XCG6 107 aa5.84□□□□□ -1.47
CACNA1C-202ENST00000335762 NSD1Q96L73 2696 aaPredicted RBP5.84□□□□□ -1.47
CACNA1C-202ENST00000335762 ZNF292O60281 2723 aa5.83□□□□□ -1.48
CACNA1C-202ENST00000335762 FRYQ5TBA9 3013 aa5.83□□□□□ -1.48
CACNA1C-202ENST00000335762 CRYBG3Q68DQ2 2970 aa5.82□□□□□ -1.48
CACNA1C-202ENST00000335762 COL6A3P12111 3177 aa5.8□□□□□ -1.48
CACNA1C-202ENST00000335762 KRTAP13-2Q52LG2 175 aa5.79□□□□□ -1.48
CACNA1C-202ENST00000335762 MGAQ8IWI9 3026 aa5.79□□□□□ -1.48
CACNA1C-202ENST00000335762 NBEAL2Q6ZNJ1 2754 aa5.79□□□□□ -1.48
CACNA1C-202ENST00000335762 TRANK1O15050 2925 aa5.78□□□□□ -1.48
CACNA1C-202ENST00000335762 WDFY4Q6ZS81 3184 aa5.77□□□□□ -1.48
CACNA1C-202ENST00000335762 Q6ZRN7 208 aaPredicted RBP5.76□□□□□ -1.49
CACNA1C-202ENST00000335762 UBR5O95071 2799 aaPredicted RBP5.75□□□□□ -1.49
CACNA1C-202ENST00000335762 DMXL2Q8TDJ6 3036 aa5.75□□□□□ -1.49
CACNA1C-202ENST00000335762 KRTAP7-1Q8IUC3 87 aa5.74□□□□□ -1.49
CACNA1C-202ENST00000335762 P0C880 135 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms