RNA–Protein interactions for RNA: ENST00000332303.5

NSMCE3-201, Transcript of NSE3 homolog, SMC5-SMC6 complex component, humanhuman

APPRIS P1 BASIC

Gene NSMCE3, Length 4,838 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE3-201ENST00000332303 GCN1Q92616 2671 aaKnown RBP10.43□□□□□ -0.74
NSMCE3-201ENST00000332303 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.4□□□□□ -0.74
NSMCE3-201ENST00000332303 TRANK1O15050 2925 aa10.39□□□□□ -0.75
NSMCE3-201ENST00000332303 FREM2Q5SZK8 3169 aa10.39□□□□□ -0.75
NSMCE3-201ENST00000332303 PRR26Q8N8Z3 221 aa10.37□□□□□ -0.75
NSMCE3-201ENST00000332303 BAHCC1Q9P281 2608 aa10.35□□□□□ -0.75
NSMCE3-201ENST00000332303 UBR5O95071 2799 aaPredicted RBP10.35□□□□□ -0.75
NSMCE3-201ENST00000332303 LINC01554Q52M75 96 aa10.33□□□□□ -0.76
NSMCE3-201ENST00000332303 FAM229BQ4G0N7 80 aa10.33□□□□□ -0.76
NSMCE3-201ENST00000332303 STAB2Q8WWQ8 2551 aa10.32□□□□□ -0.76
NSMCE3-201ENST00000332303 CDC42SE1Q9NRR8 79 aa10.32□□□□□ -0.76
NSMCE3-201ENST00000332303 SPRR1AP35321 89 aa10.31□□□□□ -0.76
NSMCE3-201ENST00000332303 KTN1-AS1Q86SY8 53 aa10.31□□□□□ -0.76
NSMCE3-201ENST00000332303 A0A0D9SG42 100 aa10.31□□□□□ -0.76
NSMCE3-201ENST00000332303 IGLV7-46A0A075B6I9 117 aa10.29□□□□□ -0.76
NSMCE3-201ENST00000332303 DSPP15924 2871 aaKnown RBP10.28□□□□□ -0.76
NSMCE3-201ENST00000332303 LCA10Q71F78 164 aa10.28□□□□□ -0.76
NSMCE3-201ENST00000332303 PLAC8Q9NZF1 115 aa10.28□□□□□ -0.76
NSMCE3-201ENST00000332303 Q6ZSA8 131 aa10.27□□□□□ -0.76
NSMCE3-201ENST00000332303 CDH23Q9H251 3354 aa10.27□□□□□ -0.77
NSMCE3-201ENST00000332303 CELSR3Q9NYQ7 3312 aa10.25□□□□□ -0.77
NSMCE3-201ENST00000332303 HRES1P13985 223 aa10.25□□□□□ -0.77
NSMCE3-201ENST00000332303 Q8NDZ9 215 aa10.25□□□□□ -0.77
NSMCE3-201ENST00000332303 Q1T7F1 81 aa10.24□□□□□ -0.77
NSMCE3-201ENST00000332303 NSD1Q96L73 2696 aaPredicted RBP10.24□□□□□ -0.77
NSMCE3-201ENST00000332303 DMBT1Q9UGM3 2413 aaPredicted RBP10.24□□□□□ -0.77
NSMCE3-201ENST00000332303 FRYQ5TBA9 3013 aa10.23□□□□□ -0.77
NSMCE3-201ENST00000332303 MMP24-AS1A0A0U1RRL7 71 aa10.22□□□□□ -0.77
NSMCE3-201ENST00000332303 SPRR1BP22528 89 aa10.22□□□□□ -0.77
NSMCE3-201ENST00000332303 NBEAL2Q6ZNJ1 2754 aa10.2□□□□□ -0.78
NSMCE3-201ENST00000332303 A0A1B0GU33 70 aa10.17□□□□□ -0.78
NSMCE3-201ENST00000332303 ZCCHC13Q8WW36 166 aaKnown RBP10.15□□□□□ -0.78
NSMCE3-201ENST00000332303 IGSF10Q6WRI0 2623 aa10.14□□□□□ -0.79
NSMCE3-201ENST00000332303 Q8N9P0 234 aaPredicted RBP10.14□□□□□ -0.79
NSMCE3-201ENST00000332303 LINC00472Q9H8W2 130 aa10.14□□□□□ -0.79
NSMCE3-201ENST00000332303 NBEAQ8NFP9 2946 aa10.13□□□□□ -0.79
NSMCE3-201ENST00000332303 KRTAP1-5Q9BYS1 174 aa10.1□□□□□ -0.79
NSMCE3-201ENST00000332303 LAMA1P25391 3075 aa10.1□□□□□ -0.79
NSMCE3-201ENST00000332303 Q75L30 129 aa10.09□□□□□ -0.79
NSMCE3-201ENST00000332303 VCANP13611 3396 aa10.09□□□□□ -0.79
NSMCE3-201ENST00000332303 KRTAP26-1Q6PEX3 210 aa10.09□□□□□ -0.79
NSMCE3-201ENST00000332303 CAMK2N1Q7Z7J9 78 aa10.08□□□□□ -0.8
NSMCE3-201ENST00000332303 LINC01558Q9Y6Z2 57 aa10.08□□□□□ -0.8
NSMCE3-201ENST00000332303 CSAG1Q6PB30 78 aa10.06□□□□□ -0.8
NSMCE3-201ENST00000332303 Q5W150 140 aa10.04□□□□□ -0.8
NSMCE3-201ENST00000332303 LUZP6Q538Z0 58 aa10.03□□□□□ -0.8
NSMCE3-201ENST00000332303 SZT2Q5T011 3432 aa10.01□□□□□ -0.81
NSMCE3-201ENST00000332303 SPINK7P58062 85 aa10□□□□□ -0.81
NSMCE3-201ENST00000332303 DMXL2Q8TDJ6 3036 aa9.99□□□□□ -0.81
NSMCE3-201ENST00000332303 M0R2T5 61 aa9.98□□□□□ -0.81
NSMCE3-201ENST00000332303 DMAC1Q96GE9 116 aa9.98□□□□□ -0.81
NSMCE3-201ENST00000332303 CYSTM1Q9H1C7 97 aa9.98□□□□□ -0.81
NSMCE3-201ENST00000332303 DNAH14Q0VDD8 3507 aa9.97□□□□□ -0.81
NSMCE3-201ENST00000332303 ITPR1Q14643 2758 aa9.97□□□□□ -0.81
NSMCE3-201ENST00000332303 KALRNO60229 2985 aa9.96□□□□□ -0.81
NSMCE3-201ENST00000332303 FP248Q71RG6 208 aaPredicted RBP9.96□□□□□ -0.82
NSMCE3-201ENST00000332303 TACC2O95359 2948 aa9.95□□□□□ -0.82
NSMCE3-201ENST00000332303 ITPR2Q14571 2701 aa9.95□□□□□ -0.82
NSMCE3-201ENST00000332303 S4R3F8 94 aa9.94□□□□□ -0.82
NSMCE3-201ENST00000332303 BOD1L1Q8NFC6 3051 aa9.93□□□□□ -0.82
NSMCE3-201ENST00000332303 Q5XG85 94 aa9.92□□□□□ -0.82
NSMCE3-201ENST00000332303 KRTAP10-1P60331 282 aa9.92□□□□□ -0.82
NSMCE3-201ENST00000332303 FRYLO94915 3013 aa9.91□□□□□ -0.82
NSMCE3-201ENST00000332303 FLNCQ14315 2725 aa9.9□□□□□ -0.82
NSMCE3-201ENST00000332303 LCE6AA0A183 80 aa9.89□□□□□ -0.83
NSMCE3-201ENST00000332303 SEC61BP60468 96 aaKnown RBP9.89□□□□□ -0.83
NSMCE3-201ENST00000332303 ATMQ13315 3056 aa9.89□□□□□ -0.83
NSMCE3-201ENST00000332303 KRTAP10-2P60368 255 aa9.88□□□□□ -0.83
NSMCE3-201ENST00000332303 ADGRG4Q8IZF6 3080 aa9.88□□□□□ -0.83
NSMCE3-201ENST00000332303 KRTAP4-16G5E9R7 235 aaPredicted RBP9.88□□□□□ -0.83
NSMCE3-201ENST00000332303 LINC00483Q53H64 154 aa9.88□□□□□ -0.83
NSMCE3-201ENST00000332303 Q5VV11 94 aa9.88□□□□□ -0.83
NSMCE3-201ENST00000332303 COL6A3P12111 3177 aa9.87□□□□□ -0.83
NSMCE3-201ENST00000332303 Q5VSD8 79 aa9.85□□□□□ -0.83
NSMCE3-201ENST00000332303 R4GN34 69 aa9.85□□□□□ -0.83
NSMCE3-201ENST00000332303 HIVEP1P15822 2718 aa9.83□□□□□ -0.84
NSMCE3-201ENST00000332303 ASH1LQ9NR48 2969 aaKnown RBP9.82□□□□□ -0.84
NSMCE3-201ENST00000332303 COL12A1Q99715 3063 aa9.81□□□□□ -0.84
NSMCE3-201ENST00000332303 CFAP47Q6ZTR5 3102 aa9.81□□□□□ -0.84
NSMCE3-201ENST00000332303 PANO1I0J062 215 aa9.8□□□□□ -0.84
NSMCE3-201ENST00000332303 Q6ZR54 194 aa9.8□□□□□ -0.84
NSMCE3-201ENST00000332303 REV3LO60673 3130 aa9.78□□□□□ -0.84
NSMCE3-201ENST00000332303 SPEGQ15772 3267 aa9.78□□□□□ -0.84
NSMCE3-201ENST00000332303 PRAC1Q96KF2 57 aa9.76□□□□□ -0.85
NSMCE3-201ENST00000332303 KRTAP29-1A8MX34 341 aaPredicted RBP9.76□□□□□ -0.85
NSMCE3-201ENST00000332303 RPL37P61927 97 aaKnown RBP9.74□□□□□ -0.85
NSMCE3-201ENST00000332303 ZZEF1O43149 2961 aa9.73□□□□□ -0.85
NSMCE3-201ENST00000332303 TENM4Q6N022 2769 aa9.73□□□□□ -0.85
NSMCE3-201ENST00000332303 KMT2BQ9UMN6 2715 aaPredicted RBP9.73□□□□□ -0.85
NSMCE3-201ENST00000332303 UTP20O75691 2785 aaKnown RBP9.7□□□□□ -0.86
NSMCE3-201ENST00000332303 NIPBLQ6KC79 2804 aaeCLIP9.7□□□□□ -0.86
NSMCE3-201ENST00000332303 A0A087X002 238 aa9.69□□□□□ -0.86
NSMCE3-201ENST00000332303 OXTP01178 125 aa9.68□□□□□ -0.86
NSMCE3-201ENST00000332303 LRBAP50851 2863 aa9.67□□□□□ -0.86
NSMCE3-201ENST00000332303 EYSQ5T1H1 3165 aa9.66□□□□□ -0.86
NSMCE3-201ENST00000332303 H1FX-AS1Q4G0G2 97 aa9.63□□□□□ -0.87
NSMCE3-201ENST00000332303 M0QZ58 72 aa9.62□□□□□ -0.87
NSMCE3-201ENST00000332303 APCP25054 2843 aa9.61□□□□□ -0.87
NSMCE3-201ENST00000332303 ROMO1P60602 79 aa9.6□□□□□ -0.87
NSMCE3-201ENST00000332303 ASB16-AS1Q495Z4 193 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms