RNA–Protein interactions for RNA: ENST00000328642.11

SYNM-201, Transcript of synemin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNM, Length 3,960 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNM-201ENST00000328642 K7EQZ3 153 aa10.2□□□□□ -0.78
SYNM-201ENST00000328642 CXCL6P80162 114 aa10.2□□□□□ -0.78
SYNM-201ENST00000328642 IGFL1Q6UW32 110 aa10.19□□□□□ -0.78
SYNM-201ENST00000328642 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.19□□□□□ -0.78
SYNM-201ENST00000328642 TRBV7-4A0A0J9YYF1 115 aa10.18□□□□□ -0.78
SYNM-201ENST00000328642 A0A1W2PNM2 257 aa10.18□□□□□ -0.78
SYNM-201ENST00000328642 WWC2-AS2Q96NR7 200 aa10.17□□□□□ -0.78
SYNM-201ENST00000328642 BCE1O60756 84 aa10.17□□□□□ -0.78
SYNM-201ENST00000328642 SMR3BP02814 79 aaPredicted RBP10.17□□□□□ -0.78
SYNM-201ENST00000328642 TLX1NBP0CAT3 122 aa10.17□□□□□ -0.78
SYNM-201ENST00000328642 TNP2Q05952 138 aa10.17□□□□□ -0.78
SYNM-201ENST00000328642 HCG22E2RYF7 251 aa10.16□□□□□ -0.78
SYNM-201ENST00000328642 ANK3Q12955 4377 aaKnown RBP10.16□□□□□ -0.78
SYNM-201ENST00000328642 DMBT1Q9UGM3 2413 aaPredicted RBP10.16□□□□□ -0.78
SYNM-201ENST00000328642 SPACA4Q8TDM5 124 aa10.15□□□□□ -0.78
SYNM-201ENST00000328642 OBSCN-AS1Q96MR7 158 aa10.13□□□□□ -0.79
SYNM-201ENST00000328642 PSORS1C2Q9UIG4 136 aa10.13□□□□□ -0.79
SYNM-201ENST00000328642 SRRM2Q9UQ35 2752 aaKnown RBP10.13□□□□□ -0.79
SYNM-201ENST00000328642 CNBPP62633 177 aaKnown RBP10.09□□□□□ -0.79
SYNM-201ENST00000328642 PANO1I0J062 215 aa10.09□□□□□ -0.79
SYNM-201ENST00000328642 H0Y9P7 68 aa10.08□□□□□ -0.8
SYNM-201ENST00000328642 CRYGAP11844 174 aa10.08□□□□□ -0.8
SYNM-201ENST00000328642 CHKB-CPT1BH3BT56 60 aa10.08□□□□□ -0.8
SYNM-201ENST00000328642 FLG2Q5D862 2391 aaPredicted RBP10.06□□□□□ -0.8
SYNM-201ENST00000328642 PLA2G2DQ9UNK4 145 aa10.05□□□□□ -0.8
SYNM-201ENST00000328642 LINC01600Q96MT4 127 aa10.02□□□□□ -0.8
SYNM-201ENST00000328642 SPTSSBQ8NFR3 76 aa10.02□□□□□ -0.81
SYNM-201ENST00000328642 CYSTM1Q9H1C7 97 aa10.02□□□□□ -0.81
SYNM-201ENST00000328642 hDV103S1A0JD37 113 aa10.01□□□□□ -0.81
SYNM-201ENST00000328642 NDUFC1O43677 76 aa10.01□□□□□ -0.81
SYNM-201ENST00000328642 C1orf64Q8NEQ6 169 aa10□□□□□ -0.81
SYNM-201ENST00000328642 ZNF861PO60384 105 aa9.99□□□□□ -0.81
SYNM-201ENST00000328642 IGLV5-48A0A075B6I7 105 aa9.98□□□□□ -0.81
SYNM-201ENST00000328642 PLA2G1BP04054 148 aaKnown RBP9.97□□□□□ -0.81
SYNM-201ENST00000328642 SMIM26A0A096LP01 95 aa9.97□□□□□ -0.81
SYNM-201ENST00000328642 PSPHP1O15172 72 aa9.97□□□□□ -0.81
SYNM-201ENST00000328642 IGLV5-37A0A075B6J1 123 aa9.95□□□□□ -0.82
SYNM-201ENST00000328642 SERP1Q9Y6X1 66 aa9.95□□□□□ -0.82
SYNM-201ENST00000328642 KRTAP11-1Q8IUC1 163 aa9.95□□□□□ -0.82
SYNM-201ENST00000328642 IGKV2D-30A0A075B6S6 120 aa9.95□□□□□ -0.82
SYNM-201ENST00000328642 IGKV2-30P06310 120 aa9.95□□□□□ -0.82
SYNM-201ENST00000328642 SPRR4Q96PI1 79 aa9.93□□□□□ -0.82
SYNM-201ENST00000328642 KRTAP7-1Q8IUC3 87 aa9.93□□□□□ -0.82
SYNM-201ENST00000328642 C1orf195Q5TG92 126 aa9.92□□□□□ -0.82
SYNM-201ENST00000328642 TYMSOSQ8TAI1 123 aa9.92□□□□□ -0.82
SYNM-201ENST00000328642 V9GYY9 64 aa9.92□□□□□ -0.82
SYNM-201ENST00000328642 SPINK1P00995 79 aa9.91□□□□□ -0.82
SYNM-201ENST00000328642 SPRR1AP35321 89 aa9.91□□□□□ -0.82
SYNM-201ENST00000328642 IGLV7-43P04211 117 aa9.9□□□□□ -0.82
SYNM-201ENST00000328642 RPS28P62857 69 aaKnown RBP9.9□□□□□ -0.82
SYNM-201ENST00000328642 DSCR10P59022 87 aa9.9□□□□□ -0.83
SYNM-201ENST00000328642 A8MWP4 228 aa9.89□□□□□ -0.83
SYNM-201ENST00000328642 KRTAP10-2P60368 255 aa9.89□□□□□ -0.83
SYNM-201ENST00000328642 LINC00336Q6ZUF6 198 aa9.89□□□□□ -0.83
SYNM-201ENST00000328642 CSMD3Q7Z407 3707 aa9.89□□□□□ -0.83
SYNM-201ENST00000328642 PRR15Q8IV56 129 aa9.88□□□□□ -0.83
SYNM-201ENST00000328642 H7BZZ5 65 aa9.85□□□□□ -0.83
SYNM-201ENST00000328642 FBN3Q75N90 2809 aa9.85□□□□□ -0.83
SYNM-201ENST00000328642 TRAV22A0A0B4J277 110 aa9.84□□□□□ -0.83
SYNM-201ENST00000328642 A0A1B0GW54 56 aa9.84□□□□□ -0.83
SYNM-201ENST00000328642 PRO0628Q9UI54 55 aa9.83□□□□□ -0.84
SYNM-201ENST00000328642 KRTAP4-16G5E9R7 235 aaPredicted RBP9.82□□□□□ -0.84
SYNM-201ENST00000328642 COL7A1Q02388 2944 aa9.8□□□□□ -0.84
SYNM-201ENST00000328642 ATP5EP56381 51 aaPredicted RBP9.8□□□□□ -0.84
SYNM-201ENST00000328642 LINC00313P59037 77 aa9.8□□□□□ -0.84
SYNM-201ENST00000328642 C8orf17Q9NRJ1 99 aa9.79□□□□□ -0.84
SYNM-201ENST00000328642 AKAP9Q99996 3911 aa9.79□□□□□ -0.84
SYNM-201ENST00000328642 PRR15LQ9BU68 103 aa9.78□□□□□ -0.84
SYNM-201ENST00000328642 Q96NJ1 140 aa9.77□□□□□ -0.84
SYNM-201ENST00000328642 A6NED7 52 aa9.77□□□□□ -0.85
SYNM-201ENST00000328642 C9orf92A6NGG3 77 aa9.77□□□□□ -0.85
SYNM-201ENST00000328642 KLKP1Q107X0 134 aa9.77□□□□□ -0.85
SYNM-201ENST00000328642 OXTP01178 125 aa9.75□□□□□ -0.85
SYNM-201ENST00000328642 MRPL34Q9BQ48 92 aaKnown RBP9.75□□□□□ -0.85
SYNM-201ENST00000328642 KRTAP10-1P60331 282 aa9.75□□□□□ -0.85
SYNM-201ENST00000328642 OCR1Q9BZK8 76 aa9.75□□□□□ -0.85
SYNM-201ENST00000328642 LIMD2Q9BT23 127 aa9.75□□□□□ -0.85
SYNM-201ENST00000328642 A0A1B0GVX0 72 aa9.74□□□□□ -0.85
SYNM-201ENST00000328642 PMAIP1Q13794 54 aa9.73□□□□□ -0.85
SYNM-201ENST00000328642 SPAG11AQ6PDA7 123 aa9.73□□□□□ -0.85
SYNM-201ENST00000328642 Q6ZRN7 208 aaPredicted RBP9.72□□□□□ -0.85
SYNM-201ENST00000328642 PRR26Q8N8Z3 221 aa9.72□□□□□ -0.85
SYNM-201ENST00000328642 PLAC8Q9NZF1 115 aa9.7□□□□□ -0.86
SYNM-201ENST00000328642 SSBP3-AS1Q7Z2R9 100 aa9.69□□□□□ -0.86
SYNM-201ENST00000328642 Q6ZR54 194 aa9.68□□□□□ -0.86
SYNM-201ENST00000328642 FAM229AH3BQW9 127 aa9.68□□□□□ -0.86
SYNM-201ENST00000328642 TP53AIP1Q9HCN2 124 aa9.67□□□□□ -0.86
SYNM-201ENST00000328642 Q5XG85 94 aa9.65□□□□□ -0.87
SYNM-201ENST00000328642 LINC00304Q8N9R0 145 aa9.65□□□□□ -0.87
SYNM-201ENST00000328642 SEC61GP60059 68 aa9.64□□□□□ -0.87
SYNM-201ENST00000328642 IGLV8-61A0A075B6I0 122 aa9.63□□□□□ -0.87
SYNM-201ENST00000328642 MEGF8Q7Z7M0 2845 aa9.61□□□□□ -0.87
SYNM-201ENST00000328642 LINC00472Q9H8W2 130 aa9.61□□□□□ -0.87
SYNM-201ENST00000328642 C7orf65Q6ZTY9 151 aa9.6□□□□□ -0.87
SYNM-201ENST00000328642 A8MUN3 132 aa9.6□□□□□ -0.87
SYNM-201ENST00000328642 A0A087X002 238 aa9.58□□□□□ -0.88
SYNM-201ENST00000328642 MMP24-AS1A0A0U1RRL7 71 aa9.57□□□□□ -0.88
SYNM-201ENST00000328642 SPRR1BP22528 89 aa9.57□□□□□ -0.88
SYNM-201ENST00000328642 COA5Q86WW8 74 aa9.56□□□□□ -0.88
SYNM-201ENST00000328642 NOTCH2NLQ7Z3S9 236 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms