RNA–Protein interactions for RNA: ENST00000316848.9

MINDY2-201, Transcript of MINDY lysine 48 deubiquitinase 2, humanhuman

TSL 1 (best)

Gene MINDY2, Length 4,866 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MINDY2-201ENST00000316848 HRES1P13985 223 aa11.13□□□□□ -0.63
MINDY2-201ENST00000316848 Q1T7F1 81 aa11.13□□□□□ -0.63
MINDY2-201ENST00000316848 RANBP2P49792 3224 aaKnown RBP11.12□□□□□ -0.63
MINDY2-201ENST00000316848 SPRR1BP22528 89 aa11.12□□□□□ -0.63
MINDY2-201ENST00000316848 MMP24-AS1A0A0U1RRL7 71 aa11.11□□□□□ -0.63
MINDY2-201ENST00000316848 CFAP54Q96N23 3096 aa11.09□□□□□ -0.63
MINDY2-201ENST00000316848 HTTP42858 3142 aa11.08□□□□□ -0.64
MINDY2-201ENST00000316848 A0A1B0GU33 70 aa11.04□□□□□ -0.64
MINDY2-201ENST00000316848 ZCCHC13Q8WW36 166 aaKnown RBP11.04□□□□□ -0.64
MINDY2-201ENST00000316848 LINC00472Q9H8W2 130 aa11.02□□□□□ -0.65
MINDY2-201ENST00000316848 UBR5O95071 2799 aaPredicted RBP11.01□□□□□ -0.65
MINDY2-201ENST00000316848 MAP1AP78559 2803 aaPredicted RBP11□□□□□ -0.65
MINDY2-201ENST00000316848 Q8N9P0 234 aaPredicted RBP11□□□□□ -0.65
MINDY2-201ENST00000316848 KRTAP1-5Q9BYS1 174 aa10.99□□□□□ -0.65
MINDY2-201ENST00000316848 KRTAP26-1Q6PEX3 210 aa10.98□□□□□ -0.65
MINDY2-201ENST00000316848 A0A0C4DFX4 3053 aa10.97□□□□□ -0.65
MINDY2-201ENST00000316848 TRANK1O15050 2925 aa10.97□□□□□ -0.65
MINDY2-201ENST00000316848 Q75L30 129 aa10.96□□□□□ -0.65
MINDY2-201ENST00000316848 LINC01558Q9Y6Z2 57 aa10.95□□□□□ -0.66
MINDY2-201ENST00000316848 CAMK2N1Q7Z7J9 78 aa10.95□□□□□ -0.66
MINDY2-201ENST00000316848 DSPP15924 2871 aaKnown RBP10.94□□□□□ -0.66
MINDY2-201ENST00000316848 CSAG1Q6PB30 78 aa10.93□□□□□ -0.66
MINDY2-201ENST00000316848 STAB2Q8WWQ8 2551 aa10.92□□□□□ -0.66
MINDY2-201ENST00000316848 Q5W150 140 aa10.91□□□□□ -0.66
MINDY2-201ENST00000316848 WDFY4Q6ZS81 3184 aa10.9□□□□□ -0.66
MINDY2-201ENST00000316848 DMBT1Q9UGM3 2413 aaPredicted RBP10.9□□□□□ -0.66
MINDY2-201ENST00000316848 IGSF10Q6WRI0 2623 aa10.89□□□□□ -0.67
MINDY2-201ENST00000316848 NBEAL2Q6ZNJ1 2754 aa10.89□□□□□ -0.67
MINDY2-201ENST00000316848 SPINK7P58062 85 aa10.87□□□□□ -0.67
MINDY2-201ENST00000316848 BRCA2P51587 3418 aa10.87□□□□□ -0.67
MINDY2-201ENST00000316848 NSD1Q96L73 2696 aaPredicted RBP10.87□□□□□ -0.67
MINDY2-201ENST00000316848 LUZP6Q538Z0 58 aa10.86□□□□□ -0.67
MINDY2-201ENST00000316848 BAHCC1Q9P281 2608 aa10.85□□□□□ -0.67
MINDY2-201ENST00000316848 M0R2T5 61 aa10.85□□□□□ -0.67
MINDY2-201ENST00000316848 DMAC1Q96GE9 116 aa10.84□□□□□ -0.67
MINDY2-201ENST00000316848 S4R3F8 94 aa10.81□□□□□ -0.68
MINDY2-201ENST00000316848 CYSTM1Q9H1C7 97 aa10.8□□□□□ -0.68
MINDY2-201ENST00000316848 MKI67P46013 3256 aaKnown RBP10.8□□□□□ -0.68
MINDY2-201ENST00000316848 KRTAP10-1P60331 282 aa10.79□□□□□ -0.68
MINDY2-201ENST00000316848 LAMA3Q16787 3333 aa10.79□□□□□ -0.68
MINDY2-201ENST00000316848 LCE6AA0A183 80 aa10.79□□□□□ -0.68
MINDY2-201ENST00000316848 FP248Q71RG6 208 aaPredicted RBP10.79□□□□□ -0.68
MINDY2-201ENST00000316848 LAMA2P24043 3122 aaKnown RBP10.78□□□□□ -0.68
MINDY2-201ENST00000316848 SEC61BP60468 96 aaKnown RBP10.77□□□□□ -0.69
MINDY2-201ENST00000316848 LINC00483Q53H64 154 aa10.76□□□□□ -0.69
MINDY2-201ENST00000316848 Q5XG85 94 aa10.75□□□□□ -0.69
MINDY2-201ENST00000316848 KRTAP10-2P60368 255 aa10.75□□□□□ -0.69
MINDY2-201ENST00000316848 KRTAP4-16G5E9R7 235 aaPredicted RBP10.74□□□□□ -0.69
MINDY2-201ENST00000316848 Q5VSD8 79 aa10.74□□□□□ -0.69
MINDY2-201ENST00000316848 Q5VV11 94 aa10.71□□□□□ -0.69
MINDY2-201ENST00000316848 TRIOO75962 3097 aa10.7□□□□□ -0.7
MINDY2-201ENST00000316848 R4GN34 69 aa10.7□□□□□ -0.7
MINDY2-201ENST00000316848 Q6ZR54 194 aa10.68□□□□□ -0.7
MINDY2-201ENST00000316848 ITPR2Q14571 2701 aa10.67□□□□□ -0.7
MINDY2-201ENST00000316848 PRUNE2Q8WUY3 3088 aa10.67□□□□□ -0.7
MINDY2-201ENST00000316848 ITPR1Q14643 2758 aa10.66□□□□□ -0.7
MINDY2-201ENST00000316848 FRYQ5TBA9 3013 aa10.66□□□□□ -0.7
MINDY2-201ENST00000316848 PANO1I0J062 215 aa10.66□□□□□ -0.7
MINDY2-201ENST00000316848 UNC80Q8N2C7 3258 aa10.6□□□□□ -0.71
MINDY2-201ENST00000316848 KRTAP29-1A8MX34 341 aaPredicted RBP10.6□□□□□ -0.71
MINDY2-201ENST00000316848 RPL37P61927 97 aaKnown RBP10.57□□□□□ -0.72
MINDY2-201ENST00000316848 FLNCQ14315 2725 aa10.57□□□□□ -0.72
MINDY2-201ENST00000316848 VPS13AQ96RL7 3174 aa10.56□□□□□ -0.72
MINDY2-201ENST00000316848 PRAC1Q96KF2 57 aa10.56□□□□□ -0.72
MINDY2-201ENST00000316848 A0A087X002 238 aa10.53□□□□□ -0.72
MINDY2-201ENST00000316848 TACC2O95359 2948 aa10.51□□□□□ -0.73
MINDY2-201ENST00000316848 OXTP01178 125 aa10.48□□□□□ -0.73
MINDY2-201ENST00000316848 H1FX-AS1Q4G0G2 97 aa10.47□□□□□ -0.73
MINDY2-201ENST00000316848 M0QZ58 72 aa10.45□□□□□ -0.74
MINDY2-201ENST00000316848 ASB16-AS1Q495Z4 193 aa10.45□□□□□ -0.74
MINDY2-201ENST00000316848 HIVEP1P15822 2718 aa10.44□□□□□ -0.74
MINDY2-201ENST00000316848 CDH23Q9H251 3354 aa10.44□□□□□ -0.74
MINDY2-201ENST00000316848 XIRP2A4UGR9 3374 aa10.43□□□□□ -0.74
MINDY2-201ENST00000316848 Q6ZRN7 208 aaPredicted RBP10.43□□□□□ -0.74
MINDY2-201ENST00000316848 ROMO1P60602 79 aa10.42□□□□□ -0.74
MINDY2-201ENST00000316848 RPS29P62273 56 aaKnown RBP10.4□□□□□ -0.75
MINDY2-201ENST00000316848 NOTCH2NLQ7Z3S9 236 aa10.39□□□□□ -0.75
MINDY2-201ENST00000316848 KRTAP11-1Q8IUC1 163 aa10.38□□□□□ -0.75
MINDY2-201ENST00000316848 UTP20O75691 2785 aaKnown RBP10.38□□□□□ -0.75
MINDY2-201ENST00000316848 FREM2Q5SZK8 3169 aa10.38□□□□□ -0.75
MINDY2-201ENST00000316848 DMXL2Q8TDJ6 3036 aa10.38□□□□□ -0.75
MINDY2-201ENST00000316848 REV3LO60673 3130 aa10.37□□□□□ -0.75
MINDY2-201ENST00000316848 TENM4Q6N022 2769 aa10.36□□□□□ -0.75
MINDY2-201ENST00000316848 KMT2BQ9UMN6 2715 aaPredicted RBP10.35□□□□□ -0.75
MINDY2-201ENST00000316848 NIPBLQ6KC79 2804 aaeCLIP10.35□□□□□ -0.752e-7■■■□□ 16.7
MINDY2-201ENST00000316848 ATMQ13315 3056 aa10.34□□□□□ -0.75
MINDY2-201ENST00000316848 KALRNO60229 2985 aa10.34□□□□□ -0.75
MINDY2-201ENST00000316848 KRTAP7-1Q8IUC3 87 aa10.33□□□□□ -0.76
MINDY2-201ENST00000316848 ADM2Q7Z4H4 148 aa10.32□□□□□ -0.76
MINDY2-201ENST00000316848 DNAH14Q0VDD8 3507 aa10.32□□□□□ -0.76
MINDY2-201ENST00000316848 COL12A1Q99715 3063 aa10.31□□□□□ -0.76
MINDY2-201ENST00000316848 SPATA8Q6RVD6 105 aa10.28□□□□□ -0.76
MINDY2-201ENST00000316848 APCP25054 2843 aa10.28□□□□□ -0.76
MINDY2-201ENST00000316848 A0A0A0MQY5 61 aa10.28□□□□□ -0.76
MINDY2-201ENST00000316848 ASH1LQ9NR48 2969 aaKnown RBP10.27□□□□□ -0.77
MINDY2-201ENST00000316848 FRYLO94915 3013 aa10.26□□□□□ -0.77
MINDY2-201ENST00000316848 KRTAP13-1Q8IUC0 172 aa10.25□□□□□ -0.77
MINDY2-201ENST00000316848 PLAC4Q8WY50 150 aa10.23□□□□□ -0.77
MINDY2-201ENST00000316848 LAMA1P25391 3075 aa10.22□□□□□ -0.77
MINDY2-201ENST00000316848 KRTAP13-2Q52LG2 175 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms