RNA–Protein interactions for RNA: ENST00000311550.9

GABRB3-202, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABRB3, Length 5,781 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-202ENST00000311550 OCR1Q9BZK8 76 aa10.94□□□□□ -0.66
GABRB3-202ENST00000311550 CYSTM1Q9H1C7 97 aa10.93□□□□□ -0.66
GABRB3-202ENST00000311550 MYO15AQ9UKN7 3530 aa10.92□□□□□ -0.66
GABRB3-202ENST00000311550 FLNCQ14315 2725 aa10.92□□□□□ -0.66
GABRB3-202ENST00000311550 SETXQ7Z333 2677 aaKnown RBP10.92□□□□□ -0.66
GABRB3-202ENST00000311550 SPRR4Q96PI1 79 aa10.92□□□□□ -0.66
GABRB3-202ENST00000311550 ATP11AUNQ6ZP68 121 aa10.9□□□□□ -0.66
GABRB3-202ENST00000311550 NOTCH1P46531 2555 aa10.9□□□□□ -0.66
GABRB3-202ENST00000311550 TACC2O95359 2948 aa10.9□□□□□ -0.66
GABRB3-202ENST00000311550 CFAP47Q6ZTR5 3102 aa10.89□□□□□ -0.67
GABRB3-202ENST00000311550 WWC2-AS2Q96NR7 200 aa10.89□□□□□ -0.67
GABRB3-202ENST00000311550 UBR5O95071 2799 aaPredicted RBP10.89□□□□□ -0.67
GABRB3-202ENST00000311550 SSBP3-AS1Q7Z2R9 100 aa10.86□□□□□ -0.67
GABRB3-202ENST00000311550 USP34Q70CQ2 3546 aa10.85□□□□□ -0.67
GABRB3-202ENST00000311550 WIPF1O43516 503 aa10.85□□□□□ -0.67
GABRB3-202ENST00000311550 IGLV7-43P04211 117 aa10.84□□□□□ -0.67
GABRB3-202ENST00000311550 ITPR1Q14643 2758 aa10.84□□□□□ -0.67
GABRB3-202ENST00000311550 COL6A5A8TX70 2615 aa10.84□□□□□ -0.67
GABRB3-202ENST00000311550 CYP4F30PQ9H0H9 118 aa10.84□□□□□ -0.67
GABRB3-202ENST00000311550 ZZEF1O43149 2961 aa10.81□□□□□ -0.68
GABRB3-202ENST00000311550 STAB1Q9NY15 2570 aa10.81□□□□□ -0.68
GABRB3-202ENST00000311550 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.79□□□□□ -0.68
GABRB3-202ENST00000311550 LOC400499M0QZD8 3231 aa10.78□□□□□ -0.68
GABRB3-202ENST00000311550 SMR3BP02814 79 aaPredicted RBP10.76□□□□□ -0.69
GABRB3-202ENST00000311550 SPRR1AP35321 89 aa10.75□□□□□ -0.69
GABRB3-202ENST00000311550 SPANXA2-OT1Q8N9U9 137 aa10.75□□□□□ -0.69
GABRB3-202ENST00000311550 C9orf92A6NGG3 77 aa10.74□□□□□ -0.69
GABRB3-202ENST00000311550 KRTAP26-1Q6PEX3 210 aa10.74□□□□□ -0.69
GABRB3-202ENST00000311550 LINC00304Q8N9R0 145 aa10.73□□□□□ -0.69
GABRB3-202ENST00000311550 DMXL1Q9Y485 3027 aa10.73□□□□□ -0.69
GABRB3-202ENST00000311550 ASH1LQ9NR48 2969 aaKnown RBP10.72□□□□□ -0.69
GABRB3-202ENST00000311550 NBEAL1Q6ZS30 2694 aa10.71□□□□□ -0.69
GABRB3-202ENST00000311550 UQCR11O14957 56 aa10.7□□□□□ -0.7
GABRB3-202ENST00000311550 TNRC18O15417 2968 aaPredicted RBP10.7□□□□□ -0.7
GABRB3-202ENST00000311550 FAM229BQ4G0N7 80 aa10.69□□□□□ -0.7
GABRB3-202ENST00000311550 TNP2Q05952 138 aa10.69□□□□□ -0.7
GABRB3-202ENST00000311550 KRTAP1-5Q9BYS1 174 aa10.67□□□□□ -0.7
GABRB3-202ENST00000311550 Q5XG85 94 aa10.67□□□□□ -0.7
GABRB3-202ENST00000311550 PRR26Q8N8Z3 221 aa10.66□□□□□ -0.7
GABRB3-202ENST00000311550 MIR22HGQ0VDD5 57 aa10.64□□□□□ -0.71
GABRB3-202ENST00000311550 UTP20O75691 2785 aaKnown RBP10.64□□□□□ -0.71
GABRB3-202ENST00000311550 FP248Q71RG6 208 aaPredicted RBP10.63□□□□□ -0.71
GABRB3-202ENST00000311550 Q1T7F1 81 aa10.62□□□□□ -0.71
GABRB3-202ENST00000311550 MMP24-AS1A0A0U1RRL7 71 aa10.61□□□□□ -0.71
GABRB3-202ENST00000311550 Q8N1X5 172 aa10.61□□□□□ -0.71
GABRB3-202ENST00000311550 OXTP01178 125 aa10.59□□□□□ -0.71
GABRB3-202ENST00000311550 ZANQ9Y493 2812 aa10.57□□□□□ -0.72
GABRB3-202ENST00000311550 IGLV7-46A0A075B6I9 117 aa10.57□□□□□ -0.72
GABRB3-202ENST00000311550 LINC00472Q9H8W2 130 aa10.54□□□□□ -0.72
GABRB3-202ENST00000311550 NSD1Q96L73 2696 aaPredicted RBP10.53□□□□□ -0.72
GABRB3-202ENST00000311550 CDC42SE1Q9NRR8 79 aa10.52□□□□□ -0.73
GABRB3-202ENST00000311550 ITPR2Q14571 2701 aa10.52□□□□□ -0.73
GABRB3-202ENST00000311550 SPRR1BP22528 89 aa10.52□□□□□ -0.73
GABRB3-202ENST00000311550 KTN1-AS1Q86SY8 53 aa10.52□□□□□ -0.73
GABRB3-202ENST00000311550 WDFY3Q8IZQ1 3526 aa10.5□□□□□ -0.73
GABRB3-202ENST00000311550 BAHCC1Q9P281 2608 aa10.5□□□□□ -0.73
GABRB3-202ENST00000311550 CD164Q04900 197 aa10.5□□□□□ -0.73
GABRB3-202ENST00000311550 HRES1P13985 223 aa10.5□□□□□ -0.73
GABRB3-202ENST00000311550 PLAC8Q9NZF1 115 aa10.5□□□□□ -0.73
GABRB3-202ENST00000311550 HRNRQ86YZ3 2850 aaPredicted RBP10.49□□□□□ -0.73
GABRB3-202ENST00000311550 Q8N9P0 234 aaPredicted RBP10.48□□□□□ -0.73
GABRB3-202ENST00000311550 KRTAP4-16G5E9R7 235 aaPredicted RBP10.48□□□□□ -0.73
GABRB3-202ENST00000311550 CELSR2Q9HCU4 2923 aa10.45□□□□□ -0.74
GABRB3-202ENST00000311550 HIVEP1P15822 2718 aa10.43□□□□□ -0.74
GABRB3-202ENST00000311550 PANO1I0J062 215 aa10.42□□□□□ -0.74
GABRB3-202ENST00000311550 APCP25054 2843 aa10.4□□□□□ -0.74
GABRB3-202ENST00000311550 Q75L30 129 aa10.39□□□□□ -0.75
GABRB3-202ENST00000311550 STAB2Q8WWQ8 2551 aa10.38□□□□□ -0.75
GABRB3-202ENST00000311550 SPINT4Q6UDR6 99 aa10.36□□□□□ -0.75
GABRB3-202ENST00000311550 Q5VV11 94 aa10.35□□□□□ -0.75
GABRB3-202ENST00000311550 LCA10Q71F78 164 aa10.35□□□□□ -0.75
GABRB3-202ENST00000311550 LINC01558Q9Y6Z2 57 aa10.35□□□□□ -0.75
GABRB3-202ENST00000311550 A0A0D9SG42 100 aa10.33□□□□□ -0.76
GABRB3-202ENST00000311550 Q5W150 140 aa10.33□□□□□ -0.76
GABRB3-202ENST00000311550 FBN2P35556 2912 aa10.33□□□□□ -0.76
GABRB3-202ENST00000311550 DCHS2Q6V1P9 2916 aa10.3□□□□□ -0.76
GABRB3-202ENST00000311550 NIPBLQ6KC79 2804 aaeCLIP10.3□□□□□ -0.76
GABRB3-202ENST00000311550 RELNP78509 3460 aa10.3□□□□□ -0.76
GABRB3-202ENST00000311550 CRYBG3Q68DQ2 2970 aa10.29□□□□□ -0.76
GABRB3-202ENST00000311550 NF1P21359 2839 aa10.29□□□□□ -0.76
GABRB3-202ENST00000311550 KRTAP11-1Q8IUC1 163 aa10.28□□□□□ -0.76
GABRB3-202ENST00000311550 KRTAP7-1Q8IUC3 87 aa10.28□□□□□ -0.76
GABRB3-202ENST00000311550 DCHS1Q96JQ0 3298 aa10.28□□□□□ -0.76
GABRB3-202ENST00000311550 J3QL48 77 aa10.28□□□□□ -0.76
GABRB3-202ENST00000311550 KRTAP29-1A8MX34 341 aaPredicted RBP10.27□□□□□ -0.77
GABRB3-202ENST00000311550 ASPMQ8IZT6 3477 aa10.27□□□□□ -0.77
GABRB3-202ENST00000311550 SPINK7P58062 85 aa10.26□□□□□ -0.77
GABRB3-202ENST00000311550 KRTAP10-2P60368 255 aa10.26□□□□□ -0.77
GABRB3-202ENST00000311550 ZFHX4Q86UP3 3567 aa10.25□□□□□ -0.77
GABRB3-202ENST00000311550 ZCCHC13Q8WW36 166 aaKnown RBP10.25□□□□□ -0.77
GABRB3-202ENST00000311550 LINC00483Q53H64 154 aa10.24□□□□□ -0.77
GABRB3-202ENST00000311550 KRTAP10-1P60331 282 aa10.22□□□□□ -0.77
GABRB3-202ENST00000311550 CRIPTQ9P021 101 aa10.21□□□□□ -0.77
GABRB3-202ENST00000311550 COX6B2Q6YFQ2 88 aa10.2□□□□□ -0.78
GABRB3-202ENST00000311550 A0A1B0GU33 70 aa10.19□□□□□ -0.78
GABRB3-202ENST00000311550 LINC01554Q52M75 96 aa10.19□□□□□ -0.78
GABRB3-202ENST00000311550 LAMA5O15230 3695 aa10.19□□□□□ -0.78
GABRB3-202ENST00000311550 RBM12B-AS1Q9P1G2 102 aa10.17□□□□□ -0.78
GABRB3-202ENST00000311550 A0A087X002 238 aa10.16□□□□□ -0.78
GABRB3-202ENST00000311550 NOTCH2NLQ7Z3S9 236 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 97.6 ms