RNA–Protein interactions for RNA: ENST00000309328.7

SSSCA1-201, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSSCA1, Length 698 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-201ENST00000309328 LINC00304Q8N9R0 145 aa10.49□□□□□ -0.73
SSSCA1-201ENST00000309328 MOBPQ13875 183 aa10.48□□□□□ -0.73
SSSCA1-201ENST00000309328 C4orf48Q5BLP8 95 aa10.48□□□□□ -0.73
SSSCA1-201ENST00000309328 C9orf153Q5TBE3 101 aa10.48□□□□□ -0.73
SSSCA1-201ENST00000309328 Q8N377 158 aa10.48□□□□□ -0.73
SSSCA1-201ENST00000309328 FAM218AQ96MZ4 157 aa10.48□□□□□ -0.73
SSSCA1-201ENST00000309328 F8WEM9 126 aa10.47□□□□□ -0.73
SSSCA1-201ENST00000309328 HERC1Q15751 4861 aa10.46□□□□□ -0.73
SSSCA1-201ENST00000309328 TRACP01848 142 aa10.45□□□□□ -0.74
SSSCA1-201ENST00000309328 CLEC2BQ92478 149 aa10.45□□□□□ -0.74
SSSCA1-201ENST00000309328 SNHG12Q9BXW3 62 aa10.44□□□□□ -0.74
SSSCA1-201ENST00000309328 SPINK1P00995 79 aa10.43□□□□□ -0.74
SSSCA1-201ENST00000309328 SMIM29Q86T20 159 aa10.43□□□□□ -0.74
SSSCA1-201ENST00000309328 LST1O00453 97 aa10.42□□□□□ -0.74
SSSCA1-201ENST00000309328 ORMDL1Q9P0S3 153 aa10.42□□□□□ -0.74
SSSCA1-201ENST00000309328 RPS29P62273 56 aaKnown RBP10.41□□□□□ -0.74
SSSCA1-201ENST00000309328 TRBV20-1A0A075B6N2 111 aa10.39□□□□□ -0.75
SSSCA1-201ENST00000309328 C9orf118A6NHY6 69 aa10.39□□□□□ -0.75
SSSCA1-201ENST00000309328 TMEM256-PLSCR3K7ERE1 68 aa10.39□□□□□ -0.75
SSSCA1-201ENST00000309328 ATXN8Q156A1 80 aa10.39□□□□□ -0.75
SSSCA1-201ENST00000309328 Q6JHZ5 121 aa10.39□□□□□ -0.75
SSSCA1-201ENST00000309328 IGLV8-61A0A075B6I0 122 aa10.38□□□□□ -0.75
SSSCA1-201ENST00000309328 CD164Q04900 197 aa10.38□□□□□ -0.75
SSSCA1-201ENST00000309328 COL5A1-AS1Q5SY13 56 aa10.38□□□□□ -0.75
SSSCA1-201ENST00000309328 H3BUT2 72 aa10.36□□□□□ -0.75
SSSCA1-201ENST00000309328 TAX1BP3O14907 124 aa10.35□□□□□ -0.75
SSSCA1-201ENST00000309328 FABP2P12104 132 aa10.35□□□□□ -0.75
SSSCA1-201ENST00000309328 PCP4L1A6NKN8 68 aa10.34□□□□□ -0.75
SSSCA1-201ENST00000309328 NDUFV3P56181 108 aaKnown RBP10.34□□□□□ -0.75
SSSCA1-201ENST00000309328 NAA38Q9BRA0 125 aaKnown RBP10.34□□□□□ -0.75
SSSCA1-201ENST00000309328 TCL1BO95988 128 aa10.32□□□□□ -0.76
SSSCA1-201ENST00000309328 UBE2V1Q13404 147 aa10.32□□□□□ -0.76
SSSCA1-201ENST00000309328 LIMD2Q9BT23 127 aa10.32□□□□□ -0.76
SSSCA1-201ENST00000309328 A0A1W2PPM0 123 aa10.31□□□□□ -0.76
SSSCA1-201ENST00000309328 H3BMG7 143 aa10.29□□□□□ -0.76
SSSCA1-201ENST00000309328 BAALC-AS2P0C853 105 aa10.26□□□□□ -0.77
SSSCA1-201ENST00000309328 Q5XG85 94 aa10.26□□□□□ -0.77
SSSCA1-201ENST00000309328 IGFL1Q6UW32 110 aa10.26□□□□□ -0.77
SSSCA1-201ENST00000309328 FP248Q71RG6 208 aaPredicted RBP10.24□□□□□ -0.77
SSSCA1-201ENST00000309328 ANKRD29Q8N6D5 301 aa10.24□□□□□ -0.77
SSSCA1-201ENST00000309328 Q6Q795 121 aa10.23□□□□□ -0.77
SSSCA1-201ENST00000309328 HRCT1Q6UXD1 115 aa10.22□□□□□ -0.77
SSSCA1-201ENST00000309328 SPCS1Q9Y6A9 102 aa10.22□□□□□ -0.77
SSSCA1-201ENST00000309328 HMCN2Q8NDA2 5059 aa10.22□□□□□ -0.77
SSSCA1-201ENST00000309328 PRR4Q16378 134 aa10.21□□□□□ -0.77
SSSCA1-201ENST00000309328 TEN1Q86WV5 123 aa10.21□□□□□ -0.77
SSSCA1-201ENST00000309328 C9JAW5 83 aa10.2□□□□□ -0.78
SSSCA1-201ENST00000309328 JMJD7-PLA2G4BH0Y9G9 81 aa10.2□□□□□ -0.78
SSSCA1-201ENST00000309328 TRBV7-7A0A0K0K1E9 115 aa10.19□□□□□ -0.78
SSSCA1-201ENST00000309328 H3BT86 120 aa10.19□□□□□ -0.78
SSSCA1-201ENST00000309328 RBM3P98179 157 aaKnown RBP10.19□□□□□ -0.78
SSSCA1-201ENST00000309328 DSCR8Q96T75 97 aa10.18□□□□□ -0.78
SSSCA1-201ENST00000309328 C21orf62-AS1Q17RA5 79 aa10.17□□□□□ -0.78
SSSCA1-201ENST00000309328 SS18L2Q9UHA2 77 aa10.17□□□□□ -0.78
SSSCA1-201ENST00000309328 A0A0G2JQZ4 141 aa10.16□□□□□ -0.78
SSSCA1-201ENST00000309328 ASB16-AS1Q495Z4 193 aa10.15□□□□□ -0.78
SSSCA1-201ENST00000309328 RETNLBQ9BQ08 111 aa10.15□□□□□ -0.78
SSSCA1-201ENST00000309328 TRBV7-4A0A0J9YYF1 115 aa10.14□□□□□ -0.79
SSSCA1-201ENST00000309328 PDE6GP18545 87 aa10.14□□□□□ -0.79
SSSCA1-201ENST00000309328 GTF2H5Q6ZYL4 71 aa10.14□□□□□ -0.79
SSSCA1-201ENST00000309328 IGLV7-46A0A075B6I9 117 aa10.13□□□□□ -0.79
SSSCA1-201ENST00000309328 K7EP34 96 aa10.12□□□□□ -0.79
SSSCA1-201ENST00000309328 A0A1B0GV72 72 aa10.1□□□□□ -0.79
SSSCA1-201ENST00000309328 CCKP06307 115 aa10.1□□□□□ -0.79
SSSCA1-201ENST00000309328 TPRXLQ17RH7 258 aa10.1□□□□□ -0.79
SSSCA1-201ENST00000309328 A0A1B0GW54 56 aa10.09□□□□□ -0.79
SSSCA1-201ENST00000309328 LOC110117498A0A087WWA1 95 aa10.08□□□□□ -0.8
SSSCA1-201ENST00000309328 A0A1W2PNM2 257 aa10.08□□□□□ -0.8
SSSCA1-201ENST00000309328 OBSCN-AS1Q96MR7 158 aa10.08□□□□□ -0.8
SSSCA1-201ENST00000309328 A0A087WSZ3 146 aa10.06□□□□□ -0.8
SSSCA1-201ENST00000309328 C1orf195Q5TG92 126 aa10.06□□□□□ -0.8
SSSCA1-201ENST00000309328 Q6ZQT0 140 aa10.02□□□□□ -0.81
SSSCA1-201ENST00000309328 MTURNQ8N3F0 131 aa10.02□□□□□ -0.81
SSSCA1-201ENST00000309328 VPS25Q9BRG1 176 aa10.02□□□□□ -0.81
SSSCA1-201ENST00000309328 LRP2P98164 4655 aa10.01□□□□□ -0.81
SSSCA1-201ENST00000309328 F8W1H4 67 aa10□□□□□ -0.81
SSSCA1-201ENST00000309328 C14orf132Q9NPU4 83 aa10□□□□□ -0.81
SSSCA1-201ENST00000309328 CDIP1Q9H305 208 aa9.99□□□□□ -0.81
SSSCA1-201ENST00000309328 PRO0461Q9UI25 63 aa9.99□□□□□ -0.81
SSSCA1-201ENST00000309328 KRTAP13-3Q3SY46 172 aa9.98□□□□□ -0.81
SSSCA1-201ENST00000309328 SMCPP49901 116 aaPredicted RBP9.96□□□□□ -0.82
SSSCA1-201ENST00000309328 LPAP08519 4548 aa9.93□□□□□ -0.82
SSSCA1-201ENST00000309328 Q96NJ1 140 aa9.9□□□□□ -0.82
SSSCA1-201ENST00000309328 J3KT08 172 aa9.89□□□□□ -0.83
SSSCA1-201ENST00000309328 LINC00472Q9H8W2 130 aa9.89□□□□□ -0.83
SSSCA1-201ENST00000309328 SIGMAR1Q99720 223 aa9.87□□□□□ -0.83
SSSCA1-201ENST00000309328 IGKV4-1P06312 121 aa9.86□□□□□ -0.83
SSSCA1-201ENST00000309328 NREPQ16612 68 aa9.83□□□□□ -0.84
SSSCA1-201ENST00000309328 XP32Q5T750 250 aa9.83□□□□□ -0.84
SSSCA1-201ENST00000309328 C9orf92A6NGG3 77 aa9.82□□□□□ -0.84
SSSCA1-201ENST00000309328 ETDBQ3ZM63 59 aa9.82□□□□□ -0.84
SSSCA1-201ENST00000309328 A0A1B0GV90 55 aa9.79□□□□□ -0.84
SSSCA1-201ENST00000309328 NDUFB1O75438 58 aa9.79□□□□□ -0.84
SSSCA1-201ENST00000309328 SEC61BP60468 96 aaKnown RBP9.79□□□□□ -0.84
SSSCA1-201ENST00000309328 UBR4Q5T4S7 5183 aa9.77□□□□□ -0.85
SSSCA1-201ENST00000309328 DEFB116Q30KQ4 102 aa9.76□□□□□ -0.85
SSSCA1-201ENST00000309328 C8orf87E5RJ46 101 aa9.75□□□□□ -0.85
SSSCA1-201ENST00000309328 UBL5Q9BZL1 73 aa9.75□□□□□ -0.85
SSSCA1-201ENST00000309328 A8MWP4 228 aa9.74□□□□□ -0.85
SSSCA1-201ENST00000309328 A0A1B0GVX0 72 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms