RNA–Protein interactions for RNA: ENST00000306773.4

NPTX1-201, Transcript of neuronal pentraxin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPTX1, Length 5,122 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPTX1-201ENST00000306773 NOTCH1P46531 2555 aa11.86□□□□□ -0.51
NPTX1-201ENST00000306773 SETXQ7Z333 2677 aaKnown RBP11.84□□□□□ -0.51
NPTX1-201ENST00000306773 IGSF10Q6WRI0 2623 aa11.82□□□□□ -0.52
NPTX1-201ENST00000306773 RBM12B-AS1Q9P1G2 102 aa11.81□□□□□ -0.52
NPTX1-201ENST00000306773 COL6A5A8TX70 2615 aa11.81□□□□□ -0.52
NPTX1-201ENST00000306773 FREM2Q5SZK8 3169 aa11.8□□□□□ -0.52
NPTX1-201ENST00000306773 NBEAL1Q6ZS30 2694 aa11.8□□□□□ -0.52
NPTX1-201ENST00000306773 NBEAL2Q6ZNJ1 2754 aa11.79□□□□□ -0.52
NPTX1-201ENST00000306773 CYSTM1Q9H1C7 97 aa11.78□□□□□ -0.52
NPTX1-201ENST00000306773 PRR26Q8N8Z3 221 aa11.75□□□□□ -0.53
NPTX1-201ENST00000306773 KTN1-AS1Q86SY8 53 aa11.75□□□□□ -0.53
NPTX1-201ENST00000306773 CDH23Q9H251 3354 aa11.75□□□□□ -0.53
NPTX1-201ENST00000306773 Q1T7F1 81 aa11.74□□□□□ -0.53
NPTX1-201ENST00000306773 SPRR1BP22528 89 aa11.74□□□□□ -0.53
NPTX1-201ENST00000306773 KRTAP26-1Q6PEX3 210 aa11.74□□□□□ -0.53
NPTX1-201ENST00000306773 KRTAP1-5Q9BYS1 174 aa11.72□□□□□ -0.53
NPTX1-201ENST00000306773 CELSR3Q9NYQ7 3312 aa11.71□□□□□ -0.53
NPTX1-201ENST00000306773 UBR5O95071 2799 aaPredicted RBP11.71□□□□□ -0.54
NPTX1-201ENST00000306773 CDC42SE1Q9NRR8 79 aa11.71□□□□□ -0.54
NPTX1-201ENST00000306773 SPINT4Q6UDR6 99 aa11.7□□□□□ -0.54
NPTX1-201ENST00000306773 NBEAQ8NFP9 2946 aa11.69□□□□□ -0.54
NPTX1-201ENST00000306773 Q8N1X5 172 aa11.68□□□□□ -0.54
NPTX1-201ENST00000306773 IGLV7-46A0A075B6I9 117 aa11.67□□□□□ -0.54
NPTX1-201ENST00000306773 Q5XG85 94 aa11.65□□□□□ -0.54
NPTX1-201ENST00000306773 LCA10Q71F78 164 aa11.63□□□□□ -0.55
NPTX1-201ENST00000306773 FP248Q71RG6 208 aaPredicted RBP11.62□□□□□ -0.55
NPTX1-201ENST00000306773 MMP24-AS1A0A0U1RRL7 71 aa11.61□□□□□ -0.55
NPTX1-201ENST00000306773 Q6ZSA8 131 aa11.61□□□□□ -0.55
NPTX1-201ENST00000306773 BAHCC1Q9P281 2608 aa11.6□□□□□ -0.55
NPTX1-201ENST00000306773 KALRNO60229 2985 aa11.59□□□□□ -0.55
NPTX1-201ENST00000306773 LAMA1P25391 3075 aa11.59□□□□□ -0.55
NPTX1-201ENST00000306773 LCE6AA0A183 80 aa11.58□□□□□ -0.56
NPTX1-201ENST00000306773 VCANP13611 3396 aa11.57□□□□□ -0.56
NPTX1-201ENST00000306773 CRIPTQ9P021 101 aa11.56□□□□□ -0.56
NPTX1-201ENST00000306773 HRES1P13985 223 aa11.56□□□□□ -0.56
NPTX1-201ENST00000306773 Q8N9P0 234 aaPredicted RBP11.55□□□□□ -0.56
NPTX1-201ENST00000306773 LINC00472Q9H8W2 130 aa11.55□□□□□ -0.56
NPTX1-201ENST00000306773 ZCCHC13Q8WW36 166 aaKnown RBP11.51□□□□□ -0.57
NPTX1-201ENST00000306773 Q75L30 129 aa11.51□□□□□ -0.57
NPTX1-201ENST00000306773 KRTAP10-1P60331 282 aa11.48□□□□□ -0.57
NPTX1-201ENST00000306773 ATMQ13315 3056 aa11.47□□□□□ -0.57
NPTX1-201ENST00000306773 TACC2O95359 2948 aa11.47□□□□□ -0.57
NPTX1-201ENST00000306773 FLNCQ14315 2725 aa11.47□□□□□ -0.57
NPTX1-201ENST00000306773 A0A0D9SG42 100 aa11.46□□□□□ -0.57
NPTX1-201ENST00000306773 Q6ZR54 194 aa11.46□□□□□ -0.57
NPTX1-201ENST00000306773 ADGRG4Q8IZF6 3080 aa11.46□□□□□ -0.57
NPTX1-201ENST00000306773 LINC01558Q9Y6Z2 57 aa11.46□□□□□ -0.57
NPTX1-201ENST00000306773 SZT2Q5T011 3432 aa11.46□□□□□ -0.57
NPTX1-201ENST00000306773 OXTP01178 125 aa11.46□□□□□ -0.58
NPTX1-201ENST00000306773 ITPR1Q14643 2758 aa11.45□□□□□ -0.58
NPTX1-201ENST00000306773 DMXL2Q8TDJ6 3036 aa11.45□□□□□ -0.58
NPTX1-201ENST00000306773 KRTAP10-2P60368 255 aa11.45□□□□□ -0.58
NPTX1-201ENST00000306773 NSD1Q96L73 2696 aaPredicted RBP11.44□□□□□ -0.58
NPTX1-201ENST00000306773 DNAH14Q0VDD8 3507 aa11.44□□□□□ -0.58
NPTX1-201ENST00000306773 LINC00483Q53H64 154 aa11.43□□□□□ -0.58
NPTX1-201ENST00000306773 STAB2Q8WWQ8 2551 aa11.41□□□□□ -0.58
NPTX1-201ENST00000306773 KRTAP4-16G5E9R7 235 aaPredicted RBP11.41□□□□□ -0.58
NPTX1-201ENST00000306773 BOD1L1Q8NFC6 3051 aa11.4□□□□□ -0.58
NPTX1-201ENST00000306773 FLG2Q5D862 2391 aaPredicted RBP11.39□□□□□ -0.59
NPTX1-201ENST00000306773 Q5VSD8 79 aa11.38□□□□□ -0.59
NPTX1-201ENST00000306773 Q5VV11 94 aa11.38□□□□□ -0.59
NPTX1-201ENST00000306773 LINC01554Q52M75 96 aa11.38□□□□□ -0.59
NPTX1-201ENST00000306773 FRYLO94915 3013 aa11.38□□□□□ -0.59
NPTX1-201ENST00000306773 ITPR2Q14571 2701 aa11.37□□□□□ -0.59
NPTX1-201ENST00000306773 Q5W150 140 aa11.36□□□□□ -0.59
NPTX1-201ENST00000306773 COL12A1Q99715 3063 aa11.36□□□□□ -0.59
NPTX1-201ENST00000306773 A0A1B0GU33 70 aa11.35□□□□□ -0.59
NPTX1-201ENST00000306773 ASH1LQ9NR48 2969 aaKnown RBP11.33□□□□□ -0.6
NPTX1-201ENST00000306773 PANO1I0J062 215 aa11.32□□□□□ -0.6
NPTX1-201ENST00000306773 SPINK7P58062 85 aa11.28□□□□□ -0.6
NPTX1-201ENST00000306773 CSAG1Q6PB30 78 aa11.28□□□□□ -0.6
NPTX1-201ENST00000306773 LRBAP50851 2863 aa11.27□□□□□ -0.61
NPTX1-201ENST00000306773 SEC61BP60468 96 aaKnown RBP11.26□□□□□ -0.61
NPTX1-201ENST00000306773 DMBT1Q9UGM3 2413 aaPredicted RBP11.25□□□□□ -0.61
NPTX1-201ENST00000306773 S4R3F8 94 aa11.22□□□□□ -0.61
NPTX1-201ENST00000306773 Q6ZRN7 208 aaPredicted RBP11.22□□□□□ -0.61
NPTX1-201ENST00000306773 PRAC1Q96KF2 57 aa11.21□□□□□ -0.62
NPTX1-201ENST00000306773 KMT2BQ9UMN6 2715 aaPredicted RBP11.21□□□□□ -0.62
NPTX1-201ENST00000306773 KRTAP29-1A8MX34 341 aaPredicted RBP11.2□□□□□ -0.62
NPTX1-201ENST00000306773 UTP20O75691 2785 aaKnown RBP11.19□□□□□ -0.62
NPTX1-201ENST00000306773 M0R2T5 61 aa11.18□□□□□ -0.62
NPTX1-201ENST00000306773 COL6A3P12111 3177 aa11.16□□□□□ -0.62
NPTX1-201ENST00000306773 KRTAP21-3Q3LHN1 58 aa11.15□□□□□ -0.62
NPTX1-201ENST00000306773 CFAP47Q6ZTR5 3102 aa11.14□□□□□ -0.63
NPTX1-201ENST00000306773 DMAC1Q96GE9 116 aa11.14□□□□□ -0.63
NPTX1-201ENST00000306773 ZZEF1O43149 2961 aa11.13□□□□□ -0.63
NPTX1-201ENST00000306773 CAMK2N1Q7Z7J9 78 aa11.13□□□□□ -0.63
NPTX1-201ENST00000306773 A0A087X002 238 aa11.12□□□□□ -0.63
NPTX1-201ENST00000306773 HIVEP1P15822 2718 aa11.1□□□□□ -0.63
NPTX1-201ENST00000306773 REV3LO60673 3130 aa11.1□□□□□ -0.63
NPTX1-201ENST00000306773 APCP25054 2843 aa11.09□□□□□ -0.63
NPTX1-201ENST00000306773 ASB16-AS1Q495Z4 193 aa11.08□□□□□ -0.64
NPTX1-201ENST00000306773 CELSR2Q9HCU4 2923 aa11.07□□□□□ -0.64
NPTX1-201ENST00000306773 RPS29P62273 56 aaKnown RBP11.06□□□□□ -0.64
NPTX1-201ENST00000306773 NIPBLQ6KC79 2804 aaeCLIP11.05□□□□□ -0.64
NPTX1-201ENST00000306773 KRTAP11-1Q8IUC1 163 aa11.04□□□□□ -0.64
NPTX1-201ENST00000306773 KRTAP7-1Q8IUC3 87 aa11.03□□□□□ -0.64
NPTX1-201ENST00000306773 SPEGQ15772 3267 aa11.03□□□□□ -0.64
NPTX1-201ENST00000306773 ZANQ9Y493 2812 aa11.01□□□□□ -0.65
NPTX1-201ENST00000306773 NOTCH2NLQ7Z3S9 236 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms