RNA–Protein interactions for RNA: ENST00000306641.1

CSPG4P1Y-201, Transcript of CSPG4 pseudogene 1 Y-linked, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P1Y, Length 795 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P1Y-201ENST00000306641 A0A1B0GX51 115 aa6.34□□□□□ -1.39
CSPG4P1Y-201ENST00000306641 OCIAD2Q56VL3 154 aa6.34□□□□□ -1.39
CSPG4P1Y-201ENST00000306641 PPDPFLQ8WWR9 84 aa6.34□□□□□ -1.39
CSPG4P1Y-201ENST00000306641 DNAL4O96015 105 aa6.33□□□□□ -1.4
CSPG4P1Y-201ENST00000306641 GHRHP01286 108 aa6.33□□□□□ -1.4
CSPG4P1Y-201ENST00000306641 RPS29P62273 56 aaKnown RBP6.33□□□□□ -1.4
CSPG4P1Y-201ENST00000306641 SMIM29Q86T20 159 aa6.33□□□□□ -1.4
CSPG4P1Y-201ENST00000306641 RETNLBQ9BQ08 111 aa6.33□□□□□ -1.4
CSPG4P1Y-201ENST00000306641 FAM218AQ96MZ4 157 aa6.32□□□□□ -1.4
CSPG4P1Y-201ENST00000306641 SNHG12Q9BXW3 62 aa6.32□□□□□ -1.4
CSPG4P1Y-201ENST00000306641 HRCT1Q6UXD1 115 aa6.31□□□□□ -1.4
CSPG4P1Y-201ENST00000306641 LIMD2Q9BT23 127 aa6.31□□□□□ -1.4
CSPG4P1Y-201ENST00000306641 SCGB1C2P0DMR2 95 aa6.3□□□□□ -1.4
CSPG4P1Y-201ENST00000306641 CLEC2BQ92478 149 aa6.3□□□□□ -1.4
CSPG4P1Y-201ENST00000306641 CD164Q04900 197 aa6.28□□□□□ -1.4
CSPG4P1Y-201ENST00000306641 BATFQ16520 125 aa6.28□□□□□ -1.4
CSPG4P1Y-201ENST00000306641 Q6JHZ5 121 aa6.28□□□□□ -1.4
CSPG4P1Y-201ENST00000306641 H3BQ85 93 aa6.27□□□□□ -1.41
CSPG4P1Y-201ENST00000306641 FABP2P12104 132 aa6.27□□□□□ -1.41
CSPG4P1Y-201ENST00000306641 FP248Q71RG6 208 aaPredicted RBP6.27□□□□□ -1.41
CSPG4P1Y-201ENST00000306641 ORMDL1Q9P0S3 153 aa6.27□□□□□ -1.41
CSPG4P1Y-201ENST00000306641 IGLV7-46A0A075B6I9 117 aa6.26□□□□□ -1.41
CSPG4P1Y-201ENST00000306641 IGLV8-61A0A075B6I0 122 aa6.25□□□□□ -1.41
CSPG4P1Y-201ENST00000306641 LYRM7Q5U5X0 104 aa6.25□□□□□ -1.41
CSPG4P1Y-201ENST00000306641 TRACP01848 142 aa6.24□□□□□ -1.41
CSPG4P1Y-201ENST00000306641 NDUFV3P56181 108 aaKnown RBP6.24□□□□□ -1.41
CSPG4P1Y-201ENST00000306641 A0A0G2JQZ4 141 aa6.23□□□□□ -1.41
CSPG4P1Y-201ENST00000306641 PCP4L1A6NKN8 68 aa6.23□□□□□ -1.41
CSPG4P1Y-201ENST00000306641 H3BUT2 72 aa6.23□□□□□ -1.41
CSPG4P1Y-201ENST00000306641 TMEM256-PLSCR3K7ERE1 68 aa6.23□□□□□ -1.41
CSPG4P1Y-201ENST00000306641 LST1O00453 97 aa6.23□□□□□ -1.41
CSPG4P1Y-201ENST00000306641 IGFL1Q6UW32 110 aa6.23□□□□□ -1.41
CSPG4P1Y-201ENST00000306641 TCL1BO95988 128 aa6.22□□□□□ -1.41
CSPG4P1Y-201ENST00000306641 TPRXLQ17RH7 258 aa6.22□□□□□ -1.41
CSPG4P1Y-201ENST00000306641 NAA38Q9BRA0 125 aaKnown RBP6.22□□□□□ -1.41
CSPG4P1Y-201ENST00000306641 HMCN2Q8NDA2 5059 aa6.22□□□□□ -1.41
CSPG4P1Y-201ENST00000306641 H3BMG7 143 aa6.21□□□□□ -1.42
CSPG4P1Y-201ENST00000306641 ATXN8Q156A1 80 aa6.21□□□□□ -1.42
CSPG4P1Y-201ENST00000306641 CDIP1Q9H305 208 aa6.21□□□□□ -1.42
CSPG4P1Y-201ENST00000306641 Q5XG85 94 aa6.2□□□□□ -1.42
CSPG4P1Y-201ENST00000306641 TRBV7-7A0A0K0K1E9 115 aa6.19□□□□□ -1.42
CSPG4P1Y-201ENST00000306641 A0A1B0GV72 72 aa6.18□□□□□ -1.42
CSPG4P1Y-201ENST00000306641 UBE2V1Q13404 147 aa6.18□□□□□ -1.42
CSPG4P1Y-201ENST00000306641 TEN1Q86WV5 123 aa6.17□□□□□ -1.42
CSPG4P1Y-201ENST00000306641 TRBV20-1A0A075B6N2 111 aa6.16□□□□□ -1.42
CSPG4P1Y-201ENST00000306641 Q6Q795 121 aa6.16□□□□□ -1.42
CSPG4P1Y-201ENST00000306641 SS18L2Q9UHA2 77 aa6.16□□□□□ -1.42
CSPG4P1Y-201ENST00000306641 C9orf118A6NHY6 69 aa6.15□□□□□ -1.42
CSPG4P1Y-201ENST00000306641 BAALC-AS2P0C853 105 aa6.15□□□□□ -1.42
CSPG4P1Y-201ENST00000306641 ANKRD29Q8N6D5 301 aa6.15□□□□□ -1.42
CSPG4P1Y-201ENST00000306641 TAX1BP3O14907 124 aa6.14□□□□□ -1.43
CSPG4P1Y-201ENST00000306641 KRTAP13-3Q3SY46 172 aa6.14□□□□□ -1.43
CSPG4P1Y-201ENST00000306641 ASB16-AS1Q495Z4 193 aa6.14□□□□□ -1.43
CSPG4P1Y-201ENST00000306641 C1orf195Q5TG92 126 aa6.14□□□□□ -1.43
CSPG4P1Y-201ENST00000306641 LPAP08519 4548 aa6.14□□□□□ -1.43
CSPG4P1Y-201ENST00000306641 A0A087WSZ3 146 aa6.12□□□□□ -1.43
CSPG4P1Y-201ENST00000306641 A0A1W2PPM0 123 aa6.12□□□□□ -1.43
CSPG4P1Y-201ENST00000306641 LRP2P98164 4655 aa6.12□□□□□ -1.43
CSPG4P1Y-201ENST00000306641 RBM3P98179 157 aaKnown RBP6.12□□□□□ -1.43
CSPG4P1Y-201ENST00000306641 COL5A1-AS1Q5SY13 56 aa6.12□□□□□ -1.43
CSPG4P1Y-201ENST00000306641 DSCR8Q96T75 97 aa6.12□□□□□ -1.43
CSPG4P1Y-201ENST00000306641 C9JAW5 83 aa6.11□□□□□ -1.43
CSPG4P1Y-201ENST00000306641 TRBV7-4A0A0J9YYF1 115 aa6.1□□□□□ -1.43
CSPG4P1Y-201ENST00000306641 JMJD7-PLA2G4BH0Y9G9 81 aa6.1□□□□□ -1.43
CSPG4P1Y-201ENST00000306641 CCKP06307 115 aa6.1□□□□□ -1.43
CSPG4P1Y-201ENST00000306641 VPS25Q9BRG1 176 aa6.1□□□□□ -1.43
CSPG4P1Y-201ENST00000306641 A0A1W2PNM2 257 aa6.09□□□□□ -1.43
CSPG4P1Y-201ENST00000306641 C9orf92A6NGG3 77 aa6.09□□□□□ -1.43
CSPG4P1Y-201ENST00000306641 SPCS1Q9Y6A9 102 aa6.07□□□□□ -1.44
CSPG4P1Y-201ENST00000306641 H3BT86 120 aa6.06□□□□□ -1.44
CSPG4P1Y-201ENST00000306641 XP32Q5T750 250 aa6.06□□□□□ -1.44
CSPG4P1Y-201ENST00000306641 C21orf62-AS1Q17RA5 79 aa6.05□□□□□ -1.44
CSPG4P1Y-201ENST00000306641 PDE6GP18545 87 aa6.04□□□□□ -1.44
CSPG4P1Y-201ENST00000306641 SEC61BP60468 96 aaKnown RBP6.04□□□□□ -1.44
CSPG4P1Y-201ENST00000306641 MTURNQ8N3F0 131 aa6.04□□□□□ -1.44
CSPG4P1Y-201ENST00000306641 SIGMAR1Q99720 223 aa6.04□□□□□ -1.44
CSPG4P1Y-201ENST00000306641 UBR4Q5T4S7 5183 aa6.03□□□□□ -1.44
CSPG4P1Y-201ENST00000306641 LOC110117498A0A087WWA1 95 aa6.02□□□□□ -1.45
CSPG4P1Y-201ENST00000306641 C14orf132Q9NPU4 83 aa6.02□□□□□ -1.45
CSPG4P1Y-201ENST00000306641 Q6ZQT0 140 aa6.01□□□□□ -1.45
CSPG4P1Y-201ENST00000306641 K7EP34 96 aa6□□□□□ -1.45
CSPG4P1Y-201ENST00000306641 IGKV4-1P06312 121 aa6□□□□□ -1.45
CSPG4P1Y-201ENST00000306641 Q96NJ1 140 aa6□□□□□ -1.45
CSPG4P1Y-201ENST00000306641 A0A0U1RQV1 116 aa5.99□□□□□ -1.45
CSPG4P1Y-201ENST00000306641 A0A1B0GW54 56 aa5.99□□□□□ -1.45
CSPG4P1Y-201ENST00000306641 GTF2H5Q6ZYL4 71 aa5.99□□□□□ -1.45
CSPG4P1Y-201ENST00000306641 OBSCN-AS1Q96MR7 158 aa5.99□□□□□ -1.45
CSPG4P1Y-201ENST00000306641 RPL37P61927 97 aaKnown RBP5.96□□□□□ -1.46
CSPG4P1Y-201ENST00000306641 DEFB116Q30KQ4 102 aa5.96□□□□□ -1.46
CSPG4P1Y-201ENST00000306641 LINC00472Q9H8W2 130 aa5.96□□□□□ -1.46
CSPG4P1Y-201ENST00000306641 J3KT08 172 aa5.95□□□□□ -1.46
CSPG4P1Y-201ENST00000306641 PCOTHQ58A44 107 aa5.94□□□□□ -1.46
CSPG4P1Y-201ENST00000306641 DSCR10P59022 87 aa5.93□□□□□ -1.46
CSPG4P1Y-201ENST00000306641 MUC17Q685J3 4493 aa5.92□□□□□ -1.46
CSPG4P1Y-201ENST00000306641 IGHV6-1A0A0B4J1U7 121 aa5.92□□□□□ -1.46
CSPG4P1Y-201ENST00000306641 SMCPP49901 116 aaPredicted RBP5.92□□□□□ -1.46
CSPG4P1Y-201ENST00000306641 LINC00313P59037 77 aa5.92□□□□□ -1.46
CSPG4P1Y-201ENST00000306641 NREPQ16612 68 aa5.92□□□□□ -1.46
CSPG4P1Y-201ENST00000306641 NDUFB1O75438 58 aa5.91□□□□□ -1.46
CSPG4P1Y-201ENST00000306641 Q75L30 129 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms