RNA–Protein interactions for RNA: ENST00000302328.7

SCN11A-201, Transcript of sodium voltage-gated channel alpha subunit 11, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SCN11A, Length 6,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11A-201ENST00000302328 AKAP13Q12802 2813 aa5.05□□□□□ -1.6
SCN11A-201ENST00000302328 CDH23Q9H251 3354 aa5.03□□□□□ -1.6
SCN11A-201ENST00000302328 MMP24-AS1A0A0U1RRL7 71 aa5.02□□□□□ -1.61
SCN11A-201ENST00000302328 SPANXA2-OT1Q8N9U9 137 aa5.02□□□□□ -1.61
SCN11A-201ENST00000302328 A0A087X002 238 aa5.01□□□□□ -1.61
SCN11A-201ENST00000302328 CYP4F30PQ9H0H9 118 aa5.01□□□□□ -1.61
SCN11A-201ENST00000302328 CDC42SE1Q9NRR8 79 aa5□□□□□ -1.61
SCN11A-201ENST00000302328 Q5W150 140 aa5□□□□□ -1.61
SCN11A-201ENST00000302328 R4GN34 69 aa4.99□□□□□ -1.61
SCN11A-201ENST00000302328 PLAC4Q8WY50 150 aa4.98□□□□□ -1.61
SCN11A-201ENST00000302328 ZNF292O60281 2723 aa4.98□□□□□ -1.61
SCN11A-201ENST00000302328 LINC00472Q9H8W2 130 aa4.98□□□□□ -1.61
SCN11A-201ENST00000302328 RPS29P62273 56 aaKnown RBP4.97□□□□□ -1.61
SCN11A-201ENST00000302328 PRUNE2Q8WUY3 3088 aa4.97□□□□□ -1.61
SCN11A-201ENST00000302328 KLKP1Q107X0 134 aa4.96□□□□□ -1.61
SCN11A-201ENST00000302328 LCA10Q71F78 164 aa4.96□□□□□ -1.62
SCN11A-201ENST00000302328 A0A1B0GU33 70 aa4.95□□□□□ -1.62
SCN11A-201ENST00000302328 Q8N9P0 234 aaPredicted RBP4.95□□□□□ -1.62
SCN11A-201ENST00000302328 MGAQ8IWI9 3026 aa4.95□□□□□ -1.62
SCN11A-201ENST00000302328 SPTBN5Q9NRC6 3674 aaKnown RBP4.95□□□□□ -1.62
SCN11A-201ENST00000302328 RPS28P62857 69 aaKnown RBP4.94□□□□□ -1.62
SCN11A-201ENST00000302328 MGAM2Q2M2H8 2515 aa4.94□□□□□ -1.62
SCN11A-201ENST00000302328 ATRQ13535 2644 aa4.93□□□□□ -1.62
SCN11A-201ENST00000302328 SZT2Q5T011 3432 aa4.93□□□□□ -1.62
SCN11A-201ENST00000302328 IGSF10Q6WRI0 2623 aa4.92□□□□□ -1.62
SCN11A-201ENST00000302328 OCR1Q9BZK8 76 aa4.92□□□□□ -1.62
SCN11A-201ENST00000302328 MAST4O15021 2626 aa4.91□□□□□ -1.62
SCN11A-201ENST00000302328 DMAC1Q96GE9 116 aa4.91□□□□□ -1.62
SCN11A-201ENST00000302328 XIRP2A4UGR9 3374 aa4.9□□□□□ -1.62
SCN11A-201ENST00000302328 KMT2BQ9UMN6 2715 aaPredicted RBP4.9□□□□□ -1.62
SCN11A-201ENST00000302328 M0QZ58 72 aa4.9□□□□□ -1.62
SCN11A-201ENST00000302328 UNC80Q8N2C7 3258 aa4.9□□□□□ -1.62
SCN11A-201ENST00000302328 KRTAP4-16G5E9R7 235 aaPredicted RBP4.9□□□□□ -1.63
SCN11A-201ENST00000302328 KRTAP11-1Q8IUC1 163 aa4.89□□□□□ -1.63
SCN11A-201ENST00000302328 PRRC2CQ9Y520 2896 aaKnown RBP4.89□□□□□ -1.63
SCN11A-201ENST00000302328 H7BZZ5 65 aa4.89□□□□□ -1.63
SCN11A-201ENST00000302328 ADM2Q7Z4H4 148 aa4.89□□□□□ -1.63
SCN11A-201ENST00000302328 Q75L30 129 aa4.88□□□□□ -1.63
SCN11A-201ENST00000302328 H1FX-AS1Q4G0G2 97 aa4.88□□□□□ -1.63
SCN11A-201ENST00000302328 PRO0628Q9UI54 55 aa4.87□□□□□ -1.63
SCN11A-201ENST00000302328 RPL37P61927 97 aaKnown RBP4.86□□□□□ -1.63
SCN11A-201ENST00000302328 KRTAP13-2Q52LG2 175 aa4.85□□□□□ -1.63
SCN11A-201ENST00000302328 ASB16-AS1Q495Z4 193 aa4.85□□□□□ -1.63
SCN11A-201ENST00000302328 C20orf166-AS1Q96NR2 134 aa4.83□□□□□ -1.64
SCN11A-201ENST00000302328 COL6A3P12111 3177 aa4.81□□□□□ -1.64
SCN11A-201ENST00000302328 TRIOO75962 3097 aa4.81□□□□□ -1.64
SCN11A-201ENST00000302328 KRTAP7-1Q8IUC3 87 aa4.8□□□□□ -1.64
SCN11A-201ENST00000302328 WDFY4Q6ZS81 3184 aa4.8□□□□□ -1.64
SCN11A-201ENST00000302328 ITPR2Q14571 2701 aa4.8□□□□□ -1.64
SCN11A-201ENST00000302328 TEX15Q9BXT5 2789 aa4.79□□□□□ -1.64
SCN11A-201ENST00000302328 Q1T7F1 81 aa4.79□□□□□ -1.64
SCN11A-201ENST00000302328 DNAH14Q0VDD8 3507 aa4.79□□□□□ -1.64
SCN11A-201ENST00000302328 KRTAP13-1Q8IUC0 172 aa4.79□□□□□ -1.64
SCN11A-201ENST00000302328 DSPP15924 2871 aaKnown RBP4.78□□□□□ -1.64
SCN11A-201ENST00000302328 Q5XG85 94 aa4.78□□□□□ -1.64
SCN11A-201ENST00000302328 UNC79Q9P2D8 2635 aa4.77□□□□□ -1.65
SCN11A-201ENST00000302328 TEP1Q99973 2627 aaKnown RBP4.77□□□□□ -1.65
SCN11A-201ENST00000302328 USP34Q70CQ2 3546 aa4.77□□□□□ -1.65
SCN11A-201ENST00000302328 LUZP6Q538Z0 58 aa4.75□□□□□ -1.65
SCN11A-201ENST00000302328 CFAP54Q96N23 3096 aa4.74□□□□□ -1.65
SCN11A-201ENST00000302328 NOTCH2NLQ7Z3S9 236 aa4.74□□□□□ -1.65
SCN11A-201ENST00000302328 A8MUU9 505 aa4.74□□□□□ -1.65
SCN11A-201ENST00000302328 KRTAP29-1A8MX34 341 aaPredicted RBP4.73□□□□□ -1.65
SCN11A-201ENST00000302328 CELSR3Q9NYQ7 3312 aa4.73□□□□□ -1.65
SCN11A-201ENST00000302328 LINC01558Q9Y6Z2 57 aa4.72□□□□□ -1.65
SCN11A-201ENST00000302328 GCN1Q92616 2671 aaKnown RBP4.72□□□□□ -1.65
SCN11A-201ENST00000302328 A0A1B0GVY2 172 aa4.72□□□□□ -1.65
SCN11A-201ENST00000302328 EYSQ5T1H1 3165 aa4.7□□□□□ -1.66
SCN11A-201ENST00000302328 LAMA2P24043 3122 aaKnown RBP4.69□□□□□ -1.66
SCN11A-201ENST00000302328 COL6A5A8TX70 2615 aa4.69□□□□□ -1.66
SCN11A-201ENST00000302328 TPRXLQ17RH7 258 aa4.68□□□□□ -1.66
SCN11A-201ENST00000302328 XP32Q5T750 250 aa4.67□□□□□ -1.66
SCN11A-201ENST00000302328 LAMA1P25391 3075 aa4.67□□□□□ -1.66
SCN11A-201ENST00000302328 UTP20O75691 2785 aaKnown RBP4.66□□□□□ -1.66
SCN11A-201ENST00000302328 SETXQ7Z333 2677 aaKnown RBP4.66□□□□□ -1.66
SCN11A-201ENST00000302328 CENPEQ02224 2701 aa4.66□□□□□ -1.66
SCN11A-201ENST00000302328 SPATA8Q6RVD6 105 aa4.65□□□□□ -1.66
SCN11A-201ENST00000302328 KRTAP1-4P0C5Y4 121 aa4.65□□□□□ -1.67
SCN11A-201ENST00000302328 VCANP13611 3396 aa4.64□□□□□ -1.67
SCN11A-201ENST00000302328 CHD6Q8TD26 2715 aa4.64□□□□□ -1.67
SCN11A-201ENST00000302328 KTN1-AS1Q86SY8 53 aa4.63□□□□□ -1.67
SCN11A-201ENST00000302328 VPS13AQ96RL7 3174 aa4.63□□□□□ -1.67
SCN11A-201ENST00000302328 ROMO1P60602 79 aa4.63□□□□□ -1.67
SCN11A-201ENST00000302328 FRYQ5TBA9 3013 aa4.63□□□□□ -1.67
SCN11A-201ENST00000302328 A0A0C4DFX4 3053 aa4.62□□□□□ -1.67
SCN11A-201ENST00000302328 DMXL2Q8TDJ6 3036 aa4.62□□□□□ -1.67
SCN11A-201ENST00000302328 LRBAP50851 2863 aa4.61□□□□□ -1.67
SCN11A-201ENST00000302328 HIVEP1P15822 2718 aa4.61□□□□□ -1.67
SCN11A-201ENST00000302328 CRYBG3Q68DQ2 2970 aa4.6□□□□□ -1.67
SCN11A-201ENST00000302328 KRTAP10-10P60014 251 aa4.59□□□□□ -1.67
SCN11A-201ENST00000302328 DMXL1Q9Y485 3027 aa4.58□□□□□ -1.68
SCN11A-201ENST00000302328 MAP1AP78559 2803 aaPredicted RBP4.58□□□□□ -1.68
SCN11A-201ENST00000302328 REV3LO60673 3130 aa4.57□□□□□ -1.68
SCN11A-201ENST00000302328 FRYLO94915 3013 aa4.56□□□□□ -1.68
SCN11A-201ENST00000302328 UBR5O95071 2799 aaPredicted RBP4.56□□□□□ -1.68
SCN11A-201ENST00000302328 APCP25054 2843 aa4.55□□□□□ -1.68
SCN11A-201ENST00000302328 TENM4Q6N022 2769 aa4.55□□□□□ -1.68
SCN11A-201ENST00000302328 NBPF19A0A087WUL8 3843 aa4.55□□□□□ -1.68
SCN11A-201ENST00000302328 ATMQ13315 3056 aa4.54□□□□□ -1.68
SCN11A-201ENST00000302328 FREM2Q5SZK8 3169 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms