RNA–Protein interactions for RNA: ENST00000299185.12

DEPDC4-201, Transcript of DEP domain containing 4, humanhuman

TSL 1 (best)

Gene DEPDC4, Length 768 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-201ENST00000299185 INAFM2P0DMQ5 153 aa3.9□□□□□ -1.79
DEPDC4-201ENST00000299185 Q6ZRX8 168 aa3.9□□□□□ -1.79
DEPDC4-201ENST00000299185 A0A1W2PPM0 123 aa3.89□□□□□ -1.79
DEPDC4-201ENST00000299185 H0Y9J4 135 aa3.89□□□□□ -1.79
DEPDC4-201ENST00000299185 ZNF861PO60384 105 aa3.89□□□□□ -1.79
DEPDC4-201ENST00000299185 RPL28P46779 137 aaKnown RBP3.89□□□□□ -1.79
DEPDC4-201ENST00000299185 ELOF1P60002 83 aaKnown RBP3.89□□□□□ -1.79
DEPDC4-201ENST00000299185 KRTAP2-2Q9BYT5 123 aa3.89□□□□□ -1.79
DEPDC4-201ENST00000299185 A0A1B0GV90 55 aa3.88□□□□□ -1.79
DEPDC4-201ENST00000299185 COX6CP09669 75 aa3.88□□□□□ -1.79
DEPDC4-201ENST00000299185 KRTAP1-4P0C5Y4 121 aa3.88□□□□□ -1.79
DEPDC4-201ENST00000299185 SCGB1C2P0DMR2 95 aa3.88□□□□□ -1.79
DEPDC4-201ENST00000299185 FABP2P12104 132 aa3.88□□□□□ -1.79
DEPDC4-201ENST00000299185 PSMB2P49721 201 aa3.88□□□□□ -1.79
DEPDC4-201ENST00000299185 CBY1Q9Y3M2 126 aa3.88□□□□□ -1.79
DEPDC4-201ENST00000299185 FLG2Q5D862 2391 aaPredicted RBP3.88□□□□□ -1.79
DEPDC4-201ENST00000299185 LYRM7Q5U5X0 104 aa3.87□□□□□ -1.79
DEPDC4-201ENST00000299185 GAGE2AQ6NT46 116 aa3.87□□□□□ -1.79
DEPDC4-201ENST00000299185 SPRR4Q96PI1 79 aa3.87□□□□□ -1.79
DEPDC4-201ENST00000299185 TRBV20-1A0A075B6N2 111 aa3.86□□□□□ -1.79
DEPDC4-201ENST00000299185 A0A087X002 238 aa3.86□□□□□ -1.79
DEPDC4-201ENST00000299185 TRBV7-6A0A0J9YX20 115 aa3.86□□□□□ -1.79
DEPDC4-201ENST00000299185 A0A1B0GV72 72 aa3.86□□□□□ -1.79
DEPDC4-201ENST00000299185 H0YGX0 51 aa3.86□□□□□ -1.79
DEPDC4-201ENST00000299185 VAMP3Q15836 100 aa3.86□□□□□ -1.79
DEPDC4-201ENST00000299185 SPINK6Q6UWN8 80 aa3.86□□□□□ -1.79
DEPDC4-201ENST00000299185 LINC00575Q6W349 94 aa3.86□□□□□ -1.79
DEPDC4-201ENST00000299185 C3orf22Q8N5N4 141 aa3.86□□□□□ -1.79
DEPDC4-201ENST00000299185 PRR26Q8N8Z3 221 aa3.86□□□□□ -1.79
DEPDC4-201ENST00000299185 DEFB105AQ8NG35 78 aa3.86□□□□□ -1.79
DEPDC4-201ENST00000299185 SRRM2Q9UQ35 2752 aaKnown RBP3.85□□□□□ -1.79
DEPDC4-201ENST00000299185 A0A0G2JQZ4 141 aa3.85□□□□□ -1.79
DEPDC4-201ENST00000299185 LINC01547P58512 204 aaPredicted RBP3.85□□□□□ -1.79
DEPDC4-201ENST00000299185 KRTAP13-2Q52LG2 175 aa3.85□□□□□ -1.79
DEPDC4-201ENST00000299185 Q6ZQY7 126 aa3.85□□□□□ -1.79
DEPDC4-201ENST00000299185 GTF2H5Q6ZYL4 71 aa3.85□□□□□ -1.79
DEPDC4-201ENST00000299185 MTURNQ8N3F0 131 aa3.85□□□□□ -1.79
DEPDC4-201ENST00000299185 SPCS1Q9Y6A9 102 aa3.85□□□□□ -1.79
DEPDC4-201ENST00000299185 FAT3Q8TDW7 4589 aa3.85□□□□□ -1.79
DEPDC4-201ENST00000299185 K7EP34 96 aa3.84□□□□□ -1.79
DEPDC4-201ENST00000299185 TCL1BO95988 128 aa3.84□□□□□ -1.79
DEPDC4-201ENST00000299185 MT1HL1P0DM35 61 aa3.84□□□□□ -1.79
DEPDC4-201ENST00000299185 UBE2V1Q13404 147 aa3.84□□□□□ -1.79
DEPDC4-201ENST00000299185 MYCBP2O75592 4640 aa3.83□□□□□ -1.8
DEPDC4-201ENST00000299185 IGLV9-49A0A0B4J1Y8 123 aa3.83□□□□□ -1.8
DEPDC4-201ENST00000299185 LST1O00453 97 aa3.83□□□□□ -1.8
DEPDC4-201ENST00000299185 SNCGO76070 127 aa3.83□□□□□ -1.8
DEPDC4-201ENST00000299185 ATXN8Q156A1 80 aa3.83□□□□□ -1.8
DEPDC4-201ENST00000299185 DHRS4-AS1Q9P1J3 65 aa3.83□□□□□ -1.8
DEPDC4-201ENST00000299185 A0A1B0GX51 115 aa3.82□□□□□ -1.8
DEPDC4-201ENST00000299185 hADV29S1A0JD25 119 aa3.82□□□□□ -1.8
DEPDC4-201ENST00000299185 H3BMG7 143 aa3.82□□□□□ -1.8
DEPDC4-201ENST00000299185 TRACP01848 142 aa3.82□□□□□ -1.8
DEPDC4-201ENST00000299185 MOBPQ13875 183 aa3.82□□□□□ -1.8
DEPDC4-201ENST00000299185 Q8N377 158 aa3.82□□□□□ -1.8
DEPDC4-201ENST00000299185 LRP1Q07954 4544 aaKnown RBP3.82□□□□□ -1.8
DEPDC4-201ENST00000299185 HMCN2Q8NDA2 5059 aa3.81□□□□□ -1.8
DEPDC4-201ENST00000299185 F8W1H4 67 aa3.81□□□□□ -1.8
DEPDC4-201ENST00000299185 LINC00483Q53H64 154 aa3.81□□□□□ -1.8
DEPDC4-201ENST00000299185 C9orf153Q5TBE3 101 aa3.81□□□□□ -1.8
DEPDC4-201ENST00000299185 SMIM29Q86T20 159 aa3.81□□□□□ -1.8
DEPDC4-201ENST00000299185 IGLV5-48A0A075B6I7 105 aa3.8□□□□□ -1.8
DEPDC4-201ENST00000299185 SLC25A20O43772 301 aa3.8□□□□□ -1.8
DEPDC4-201ENST00000299185 ZNF706Q9Y5V0 76 aaPredicted RBP3.8□□□□□ -1.8
DEPDC4-201ENST00000299185 SPRR1BP22528 89 aa3.79□□□□□ -1.8
DEPDC4-201ENST00000299185 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.79□□□□□ -1.8
DEPDC4-201ENST00000299185 Q8NBF4 154 aa3.79□□□□□ -1.8
DEPDC4-201ENST00000299185 LINC01600Q96MT4 127 aa3.79□□□□□ -1.8
DEPDC4-201ENST00000299185 PRO0461Q9UI25 63 aa3.79□□□□□ -1.8
DEPDC4-201ENST00000299185 RNF213Q63HN8 5207 aa3.78□□□□□ -1.8
DEPDC4-201ENST00000299185 TEX49A0A1B0GTD5 131 aa3.78□□□□□ -1.8
DEPDC4-201ENST00000299185 C9JAW5 83 aa3.78□□□□□ -1.8
DEPDC4-201ENST00000299185 DNAL4O96015 105 aa3.78□□□□□ -1.8
DEPDC4-201ENST00000299185 IGKV2-30P06310 120 aa3.78□□□□□ -1.8
DEPDC4-201ENST00000299185 BAALC-AS2P0C853 105 aa3.78□□□□□ -1.8
DEPDC4-201ENST00000299185 CRYGAP11844 174 aa3.78□□□□□ -1.8
DEPDC4-201ENST00000299185 HRCT1Q6UXD1 115 aa3.78□□□□□ -1.8
DEPDC4-201ENST00000299185 TYMSOSQ8TAI1 123 aa3.78□□□□□ -1.8
DEPDC4-201ENST00000299185 TNXBP22105 4242 aa3.77□□□□□ -1.81
DEPDC4-201ENST00000299185 H3BQ85 93 aa3.77□□□□□ -1.81
DEPDC4-201ENST00000299185 H3BT86 120 aa3.77□□□□□ -1.81
DEPDC4-201ENST00000299185 KRTAP10-8P60410 259 aa3.77□□□□□ -1.81
DEPDC4-201ENST00000299185 FAM229BQ4G0N7 80 aa3.77□□□□□ -1.81
DEPDC4-201ENST00000299185 OCIAD2Q56VL3 154 aa3.77□□□□□ -1.81
DEPDC4-201ENST00000299185 ANKRD29Q8N6D5 301 aa3.77□□□□□ -1.81
DEPDC4-201ENST00000299185 ORMDL1Q9P0S3 153 aa3.77□□□□□ -1.81
DEPDC4-201ENST00000299185 TMEM256-PLSCR3K7ERE1 68 aa3.76□□□□□ -1.81
DEPDC4-201ENST00000299185 LAMTOR3Q9UHA4 124 aa3.76□□□□□ -1.81
DEPDC4-201ENST00000299185 OXTP01178 125 aa3.75□□□□□ -1.81
DEPDC4-201ENST00000299185 NDUFV3P56181 108 aaKnown RBP3.75□□□□□ -1.81
DEPDC4-201ENST00000299185 LINC00304Q8N9R0 145 aa3.75□□□□□ -1.81
DEPDC4-201ENST00000299185 RETNLBQ9BQ08 111 aa3.75□□□□□ -1.81
DEPDC4-201ENST00000299185 F8WEM9 126 aa3.74□□□□□ -1.81
DEPDC4-201ENST00000299185 ETDBQ3ZM63 59 aa3.74□□□□□ -1.81
DEPDC4-201ENST00000299185 IGFL1Q6UW32 110 aa3.74□□□□□ -1.81
DEPDC4-201ENST00000299185 TEN1Q86WV5 123 aa3.74□□□□□ -1.81
DEPDC4-201ENST00000299185 PPDPFLQ8WWR9 84 aa3.74□□□□□ -1.81
DEPDC4-201ENST00000299185 OBSCN-AS1Q96MR7 158 aa3.72□□□□□ -1.81
DEPDC4-201ENST00000299185 C14orf132Q9NPU4 83 aa3.72□□□□□ -1.81
DEPDC4-201ENST00000299185 IGLV8-61A0A075B6I0 122 aa3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 91.2 ms