RNA–Protein interactions for RNA: ENST00000296794.10

ARHGEF28-201, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

TSL 5 BASIC

Gene ARHGEF28, Length 5,246 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-201ENST00000296794 Q1T7F1 81 aa10.09□□□□□ -0.79
ARHGEF28-201ENST00000296794 KTN1-AS1Q86SY8 53 aa10.08□□□□□ -0.8
ARHGEF28-201ENST00000296794 VPS13AQ96RL7 3174 aa10.08□□□□□ -0.8
ARHGEF28-201ENST00000296794 CD164Q04900 197 aa10.07□□□□□ -0.8
ARHGEF28-201ENST00000296794 Q5XG85 94 aa10.06□□□□□ -0.8
ARHGEF28-201ENST00000296794 GCN1Q92616 2671 aaKnown RBP10.06□□□□□ -0.8
ARHGEF28-201ENST00000296794 CDC42SE1Q9NRR8 79 aa10.03□□□□□ -0.8
ARHGEF28-201ENST00000296794 CDH23Q9H251 3354 aa10.03□□□□□ -0.8
ARHGEF28-201ENST00000296794 SPRR1AP35321 89 aa10.01□□□□□ -0.81
ARHGEF28-201ENST00000296794 FAM229BQ4G0N7 80 aa10.01□□□□□ -0.81
ARHGEF28-201ENST00000296794 PRR26Q8N8Z3 221 aa10.01□□□□□ -0.81
ARHGEF28-201ENST00000296794 FRYQ5TBA9 3013 aa10□□□□□ -0.81
ARHGEF28-201ENST00000296794 FP248Q71RG6 208 aaPredicted RBP10□□□□□ -0.81
ARHGEF28-201ENST00000296794 IGLV7-46A0A075B6I9 117 aa9.98□□□□□ -0.81
ARHGEF28-201ENST00000296794 RBM12B-AS1Q9P1G2 102 aa9.98□□□□□ -0.81
ARHGEF28-201ENST00000296794 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.98□□□□□ -0.81
ARHGEF28-201ENST00000296794 NSD1Q96L73 2696 aaPredicted RBP9.97□□□□□ -0.81
ARHGEF28-201ENST00000296794 SPINT4Q6UDR6 99 aa9.96□□□□□ -0.81
ARHGEF28-201ENST00000296794 LCA10Q71F78 164 aa9.96□□□□□ -0.82
ARHGEF28-201ENST00000296794 Q8N1X5 172 aa9.95□□□□□ -0.82
ARHGEF28-201ENST00000296794 FLG2Q5D862 2391 aaPredicted RBP9.94□□□□□ -0.82
ARHGEF28-201ENST00000296794 MMP24-AS1A0A0U1RRL7 71 aa9.94□□□□□ -0.82
ARHGEF28-201ENST00000296794 OXTP01178 125 aa9.9□□□□□ -0.82
ARHGEF28-201ENST00000296794 STAB2Q8WWQ8 2551 aa9.9□□□□□ -0.82
ARHGEF28-201ENST00000296794 KRTAP26-1Q6PEX3 210 aa9.89□□□□□ -0.83
ARHGEF28-201ENST00000296794 CELSR3Q9NYQ7 3312 aa9.89□□□□□ -0.83
ARHGEF28-201ENST00000296794 Q8N9P0 234 aaPredicted RBP9.89□□□□□ -0.83
ARHGEF28-201ENST00000296794 Q75L30 129 aa9.88□□□□□ -0.83
ARHGEF28-201ENST00000296794 PLAC8Q9NZF1 115 aa9.87□□□□□ -0.83
ARHGEF28-201ENST00000296794 HRES1P13985 223 aa9.87□□□□□ -0.83
ARHGEF28-201ENST00000296794 NBEAQ8NFP9 2946 aa9.85□□□□□ -0.83
ARHGEF28-201ENST00000296794 LINC00472Q9H8W2 130 aa9.85□□□□□ -0.83
ARHGEF28-201ENST00000296794 LAMA1P25391 3075 aa9.85□□□□□ -0.83
ARHGEF28-201ENST00000296794 Q6ZSA8 131 aa9.84□□□□□ -0.83
ARHGEF28-201ENST00000296794 FREM2Q5SZK8 3169 aa9.84□□□□□ -0.83
ARHGEF28-201ENST00000296794 NBEAL2Q6ZNJ1 2754 aa9.84□□□□□ -0.83
ARHGEF28-201ENST00000296794 SPRR1BP22528 89 aa9.84□□□□□ -0.83
ARHGEF28-201ENST00000296794 VCANP13611 3396 aa9.84□□□□□ -0.83
ARHGEF28-201ENST00000296794 DMBT1Q9UGM3 2413 aaPredicted RBP9.83□□□□□ -0.84
ARHGEF28-201ENST00000296794 FLNCQ14315 2725 aa9.82□□□□□ -0.84
ARHGEF28-201ENST00000296794 DNAH14Q0VDD8 3507 aa9.82□□□□□ -0.84
ARHGEF28-201ENST00000296794 LINC01558Q9Y6Z2 57 aa9.82□□□□□ -0.84
ARHGEF28-201ENST00000296794 ITPR2Q14571 2701 aa9.81□□□□□ -0.84
ARHGEF28-201ENST00000296794 LCE6AA0A183 80 aa9.81□□□□□ -0.84
ARHGEF28-201ENST00000296794 CRIPTQ9P021 101 aa9.81□□□□□ -0.84
ARHGEF28-201ENST00000296794 ITPR1Q14643 2758 aa9.79□□□□□ -0.84
ARHGEF28-201ENST00000296794 SZT2Q5T011 3432 aa9.79□□□□□ -0.84
ARHGEF28-201ENST00000296794 Q5VV11 94 aa9.78□□□□□ -0.84
ARHGEF28-201ENST00000296794 KRTAP1-5Q9BYS1 174 aa9.78□□□□□ -0.84
ARHGEF28-201ENST00000296794 KALRNO60229 2985 aa9.76□□□□□ -0.85
ARHGEF28-201ENST00000296794 A0A0D9SG42 100 aa9.75□□□□□ -0.85
ARHGEF28-201ENST00000296794 REV3LO60673 3130 aa9.74□□□□□ -0.85
ARHGEF28-201ENST00000296794 KRTAP4-16G5E9R7 235 aaPredicted RBP9.71□□□□□ -0.86
ARHGEF28-201ENST00000296794 TACC2O95359 2948 aa9.7□□□□□ -0.86
ARHGEF28-201ENST00000296794 LINC01554Q52M75 96 aa9.69□□□□□ -0.86
ARHGEF28-201ENST00000296794 Q5W150 140 aa9.69□□□□□ -0.86
ARHGEF28-201ENST00000296794 A0A1B0GU33 70 aa9.67□□□□□ -0.86
ARHGEF28-201ENST00000296794 SPINK7P58062 85 aa9.66□□□□□ -0.86
ARHGEF28-201ENST00000296794 Q5VSD8 79 aa9.66□□□□□ -0.86
ARHGEF28-201ENST00000296794 M0R2T5 61 aa9.65□□□□□ -0.86
ARHGEF28-201ENST00000296794 TENM4Q6N022 2769 aa9.65□□□□□ -0.87
ARHGEF28-201ENST00000296794 ADGRG4Q8IZF6 3080 aa9.64□□□□□ -0.87
ARHGEF28-201ENST00000296794 KRTAP10-1P60331 282 aa9.64□□□□□ -0.87
ARHGEF28-201ENST00000296794 ZCCHC13Q8WW36 166 aaKnown RBP9.63□□□□□ -0.87
ARHGEF28-201ENST00000296794 ATMQ13315 3056 aa9.63□□□□□ -0.87
ARHGEF28-201ENST00000296794 KRTAP10-2P60368 255 aa9.62□□□□□ -0.87
ARHGEF28-201ENST00000296794 HIVEP1P15822 2718 aa9.61□□□□□ -0.87
ARHGEF28-201ENST00000296794 PRAC1Q96KF2 57 aa9.61□□□□□ -0.87
ARHGEF28-201ENST00000296794 BOD1L1Q8NFC6 3051 aa9.61□□□□□ -0.87
ARHGEF28-201ENST00000296794 KRTAP29-1A8MX34 341 aaPredicted RBP9.59□□□□□ -0.87
ARHGEF28-201ENST00000296794 FRYLO94915 3013 aa9.59□□□□□ -0.87
ARHGEF28-201ENST00000296794 COL12A1Q99715 3063 aa9.58□□□□□ -0.88
ARHGEF28-201ENST00000296794 LRBAP50851 2863 aa9.55□□□□□ -0.88
ARHGEF28-201ENST00000296794 LINC00483Q53H64 154 aa9.55□□□□□ -0.88
ARHGEF28-201ENST00000296794 Q6ZR54 194 aa9.55□□□□□ -0.88
ARHGEF28-201ENST00000296794 PANO1I0J062 215 aa9.55□□□□□ -0.88
ARHGEF28-201ENST00000296794 SEC61BP60468 96 aaKnown RBP9.54□□□□□ -0.88
ARHGEF28-201ENST00000296794 KMT2BQ9UMN6 2715 aaPredicted RBP9.54□□□□□ -0.88
ARHGEF28-201ENST00000296794 COL6A3P12111 3177 aa9.51□□□□□ -0.89
ARHGEF28-201ENST00000296794 DMXL2Q8TDJ6 3036 aa9.49□□□□□ -0.89
ARHGEF28-201ENST00000296794 DMAC1Q96GE9 116 aa9.49□□□□□ -0.89
ARHGEF28-201ENST00000296794 CSAG1Q6PB30 78 aa9.49□□□□□ -0.89
ARHGEF28-201ENST00000296794 UTP20O75691 2785 aaKnown RBP9.46□□□□□ -0.89
ARHGEF28-201ENST00000296794 CAMK2N1Q7Z7J9 78 aa9.44□□□□□ -0.9
ARHGEF28-201ENST00000296794 NIPBLQ6KC79 2804 aaeCLIP9.43□□□□□ -0.9
ARHGEF28-201ENST00000296794 KRTAP21-3Q3LHN1 58 aa9.43□□□□□ -0.9
ARHGEF28-201ENST00000296794 KRTAP7-1Q8IUC3 87 aa9.43□□□□□ -0.9
ARHGEF28-201ENST00000296794 KRTAP11-1Q8IUC1 163 aa9.42□□□□□ -0.9
ARHGEF28-201ENST00000296794 ASH1LQ9NR48 2969 aaKnown RBP9.42□□□□□ -0.9
ARHGEF28-201ENST00000296794 SPEGQ15772 3267 aa9.4□□□□□ -0.91
ARHGEF28-201ENST00000296794 A0A087X002 238 aa9.39□□□□□ -0.91
ARHGEF28-201ENST00000296794 NOTCH2NLQ7Z3S9 236 aa9.39□□□□□ -0.91
ARHGEF28-201ENST00000296794 S4R3F8 94 aa9.36□□□□□ -0.91
ARHGEF28-201ENST00000296794 APCP25054 2843 aa9.34□□□□□ -0.91
ARHGEF28-201ENST00000296794 ZZEF1O43149 2961 aa9.32□□□□□ -0.92
ARHGEF28-201ENST00000296794 CRYBG3Q68DQ2 2970 aa9.31□□□□□ -0.92
ARHGEF28-201ENST00000296794 SPTBN5Q9NRC6 3674 aaKnown RBP9.3□□□□□ -0.92
ARHGEF28-201ENST00000296794 CFAP47Q6ZTR5 3102 aa9.3□□□□□ -0.92
ARHGEF28-201ENST00000296794 CELSR2Q9HCU4 2923 aa9.29□□□□□ -0.92
ARHGEF28-201ENST00000296794 Q6ZRN7 208 aaPredicted RBP9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms