RNA–Protein interactions for RNA: ENST00000296440.10

PLXNB1-201, Transcript of plexin B1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PLXNB1, Length 7,143 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLXNB1-201ENST00000296440 C5orf42Q9H799 3197 aa7.9□□□□□ -1.14
PLXNB1-201ENST00000296440 MMP24-AS1A0A0U1RRL7 71 aa7.89□□□□□ -1.15
PLXNB1-201ENST00000296440 C20orf166-AS1Q96NR2 134 aa7.89□□□□□ -1.15
PLXNB1-201ENST00000296440 CFAP46Q8IYW2 2715 aa7.88□□□□□ -1.15
PLXNB1-201ENST00000296440 ROMO1P60602 79 aa7.86□□□□□ -1.15
PLXNB1-201ENST00000296440 KRTAP1-5Q9BYS1 174 aa7.85□□□□□ -1.15
PLXNB1-201ENST00000296440 HELZ2Q9BYK8 2649 aaKnown RBP7.84□□□□□ -1.15
PLXNB1-201ENST00000296440 STAB1Q9NY15 2570 aa7.84□□□□□ -1.15
PLXNB1-201ENST00000296440 CEP350Q5VT06 3117 aa7.84□□□□□ -1.15
PLXNB1-201ENST00000296440 OCR1Q9BZK8 76 aa7.81□□□□□ -1.16
PLXNB1-201ENST00000296440 PRRC2CQ9Y520 2896 aaKnown RBP7.81□□□□□ -1.16
PLXNB1-201ENST00000296440 SPRR1BP22528 89 aa7.81□□□□□ -1.16
PLXNB1-201ENST00000296440 A8MUU9 505 aa7.78□□□□□ -1.16
PLXNB1-201ENST00000296440 ITPR3Q14573 2671 aa7.78□□□□□ -1.16
PLXNB1-201ENST00000296440 Q75L30 129 aa7.77□□□□□ -1.17
PLXNB1-201ENST00000296440 FLNAP21333 2647 aaKnown RBP7.75□□□□□ -1.17
PLXNB1-201ENST00000296440 SPATA8Q6RVD6 105 aa7.75□□□□□ -1.17
PLXNB1-201ENST00000296440 Q6ZR54 194 aa7.74□□□□□ -1.17
PLXNB1-201ENST00000296440 Q8NDZ9 215 aa7.73□□□□□ -1.17
PLXNB1-201ENST00000296440 PCNTO95613 3336 aa7.73□□□□□ -1.17
PLXNB1-201ENST00000296440 PANO1I0J062 215 aa7.72□□□□□ -1.17
PLXNB1-201ENST00000296440 LINC00472Q9H8W2 130 aa7.72□□□□□ -1.17
PLXNB1-201ENST00000296440 SPRR1AP35321 89 aa7.72□□□□□ -1.17
PLXNB1-201ENST00000296440 LINC01558Q9Y6Z2 57 aa7.71□□□□□ -1.17
PLXNB1-201ENST00000296440 A0A087X002 238 aa7.71□□□□□ -1.18
PLXNB1-201ENST00000296440 PRAC1Q96KF2 57 aa7.68□□□□□ -1.18
PLXNB1-201ENST00000296440 DMBT1Q9UGM3 2413 aaPredicted RBP7.67□□□□□ -1.18
PLXNB1-201ENST00000296440 KRTAP26-1Q6PEX3 210 aa7.66□□□□□ -1.18
PLXNB1-201ENST00000296440 SETXQ7Z333 2677 aaKnown RBP7.63□□□□□ -1.19
PLXNB1-201ENST00000296440 H3BS24 57 aa7.62□□□□□ -1.19
PLXNB1-201ENST00000296440 TNP1P09430 55 aa7.61□□□□□ -1.19
PLXNB1-201ENST00000296440 CHD7Q9P2D1 2997 aa7.6□□□□□ -1.19
PLXNB1-201ENST00000296440 CYSTM1Q9H1C7 97 aa7.59□□□□□ -1.19
PLXNB1-201ENST00000296440 KRTAP10-8P60410 259 aa7.59□□□□□ -1.19
PLXNB1-201ENST00000296440 A0A1B0GVY2 172 aa7.58□□□□□ -1.2
PLXNB1-201ENST00000296440 KRTAP21-3Q3LHN1 58 aa7.57□□□□□ -1.2
PLXNB1-201ENST00000296440 MKI67P46013 3256 aaKnown RBP7.57□□□□□ -1.2
PLXNB1-201ENST00000296440 Q5XG85 94 aa7.57□□□□□ -1.2
PLXNB1-201ENST00000296440 BAHCC1Q9P281 2608 aa7.56□□□□□ -1.2
PLXNB1-201ENST00000296440 TEX15Q9BXT5 2789 aa7.55□□□□□ -1.2
PLXNB1-201ENST00000296440 NBEAL1Q6ZS30 2694 aa7.53□□□□□ -1.2
PLXNB1-201ENST00000296440 RPS29P62273 56 aaKnown RBP7.53□□□□□ -1.2
PLXNB1-201ENST00000296440 LAMA3Q16787 3333 aa7.5□□□□□ -1.21
PLXNB1-201ENST00000296440 RANBP2P49792 3224 aaKnown RBP7.47□□□□□ -1.21
PLXNB1-201ENST00000296440 KRTAP10-10P60014 251 aa7.47□□□□□ -1.21
PLXNB1-201ENST00000296440 C10orf95Q9H7T3 257 aa7.47□□□□□ -1.21
PLXNB1-201ENST00000296440 AKAP13Q12802 2813 aa7.47□□□□□ -1.21
PLXNB1-201ENST00000296440 Q5VV11 94 aa7.46□□□□□ -1.22
PLXNB1-201ENST00000296440 BRCA2P51587 3418 aa7.45□□□□□ -1.22
PLXNB1-201ENST00000296440 P0C880 135 aa7.45□□□□□ -1.22
PLXNB1-201ENST00000296440 TEP1Q99973 2627 aaKnown RBP7.44□□□□□ -1.22
PLXNB1-201ENST00000296440 STAB2Q8WWQ8 2551 aa7.44□□□□□ -1.22
PLXNB1-201ENST00000296440 PRO2289Q9P1D8 64 aa7.43□□□□□ -1.22
PLXNB1-201ENST00000296440 CFAP54Q96N23 3096 aa7.43□□□□□ -1.22
PLXNB1-201ENST00000296440 PRUNE2Q8WUY3 3088 aa7.42□□□□□ -1.22
PLXNB1-201ENST00000296440 HTTP42858 3142 aa7.42□□□□□ -1.22
PLXNB1-201ENST00000296440 A0A0C4DFX4 3053 aa7.4□□□□□ -1.23
PLXNB1-201ENST00000296440 MGAQ8IWI9 3026 aa7.39□□□□□ -1.23
PLXNB1-201ENST00000296440 UNC79Q9P2D8 2635 aa7.39□□□□□ -1.23
PLXNB1-201ENST00000296440 A8MU10 97 aa7.39□□□□□ -1.23
PLXNB1-201ENST00000296440 CENPEQ02224 2701 aa7.38□□□□□ -1.23
PLXNB1-201ENST00000296440 XIRP2A4UGR9 3374 aa7.37□□□□□ -1.23
PLXNB1-201ENST00000296440 NOTCH2NLQ7Z3S9 236 aa7.36□□□□□ -1.23
PLXNB1-201ENST00000296440 CHD9Q3L8U1 2897 aa7.34□□□□□ -1.23
PLXNB1-201ENST00000296440 ASB16-AS1Q495Z4 193 aa7.34□□□□□ -1.24
PLXNB1-201ENST00000296440 LAMA2P24043 3122 aaKnown RBP7.33□□□□□ -1.24
PLXNB1-201ENST00000296440 CHD6Q8TD26 2715 aa7.32□□□□□ -1.24
PLXNB1-201ENST00000296440 Q6ZRN7 208 aaPredicted RBP7.32□□□□□ -1.24
PLXNB1-201ENST00000296440 KRTAP13-2Q52LG2 175 aa7.31□□□□□ -1.24
PLXNB1-201ENST00000296440 WDFY4Q6ZS81 3184 aa7.29□□□□□ -1.24
PLXNB1-201ENST00000296440 COL6A5A8TX70 2615 aa7.28□□□□□ -1.24
PLXNB1-201ENST00000296440 KRTAP16-1A8MUX0 517 aa7.28□□□□□ -1.24
PLXNB1-201ENST00000296440 KRTAP11-1Q8IUC1 163 aa7.26□□□□□ -1.25
PLXNB1-201ENST00000296440 NOTCH1P46531 2555 aa7.25□□□□□ -1.25
PLXNB1-201ENST00000296440 KRTAP4-16G5E9R7 235 aaPredicted RBP7.25□□□□□ -1.25
PLXNB1-201ENST00000296440 TRIOO75962 3097 aa7.25□□□□□ -1.25
PLXNB1-201ENST00000296440 CDH23Q9H251 3354 aa7.24□□□□□ -1.25
PLXNB1-201ENST00000296440 UNC80Q8N2C7 3258 aa7.21□□□□□ -1.26
PLXNB1-201ENST00000296440 CELSR3Q9NYQ7 3312 aa7.2□□□□□ -1.26
PLXNB1-201ENST00000296440 DNAH14Q0VDD8 3507 aa7.2□□□□□ -1.26
PLXNB1-201ENST00000296440 TRANK1O15050 2925 aa7.19□□□□□ -1.26
PLXNB1-201ENST00000296440 KRTAP29-1A8MX34 341 aaPredicted RBP7.17□□□□□ -1.26
PLXNB1-201ENST00000296440 KRTAP25-1Q3LHN0 102 aa7.16□□□□□ -1.26
PLXNB1-201ENST00000296440 XP32Q5T750 250 aa7.16□□□□□ -1.26
PLXNB1-201ENST00000296440 FREM2Q5SZK8 3169 aa7.16□□□□□ -1.26
PLXNB1-201ENST00000296440 ITPR2Q14571 2701 aa7.14□□□□□ -1.27
PLXNB1-201ENST00000296440 KMT2BQ9UMN6 2715 aaPredicted RBP7.14□□□□□ -1.27
PLXNB1-201ENST00000296440 DSPP15924 2871 aaKnown RBP7.13□□□□□ -1.27
PLXNB1-201ENST00000296440 ZNF292O60281 2723 aa7.13□□□□□ -1.27
PLXNB1-201ENST00000296440 TPRXLQ17RH7 258 aa7.11□□□□□ -1.27
PLXNB1-201ENST00000296440 CRYBG3Q68DQ2 2970 aa7.1□□□□□ -1.27
PLXNB1-201ENST00000296440 VPS13AQ96RL7 3174 aa7.09□□□□□ -1.27
PLXNB1-201ENST00000296440 FRYQ5TBA9 3013 aa7.09□□□□□ -1.28
PLXNB1-201ENST00000296440 PP632Q6XCG6 107 aa7.08□□□□□ -1.28
PLXNB1-201ENST00000296440 IGSF10Q6WRI0 2623 aa7.08□□□□□ -1.28
PLXNB1-201ENST00000296440 NDUFAF8A1L188 74 aa7.08□□□□□ -1.28
PLXNB1-201ENST00000296440 REV3LO60673 3130 aa7.04□□□□□ -1.28
PLXNB1-201ENST00000296440 SZT2Q5T011 3432 aa7.03□□□□□ -1.28
PLXNB1-201ENST00000296440 MAP1AP78559 2803 aaPredicted RBP7.02□□□□□ -1.29
PLXNB1-201ENST00000296440 GCN1Q92616 2671 aaKnown RBP7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms