RNA–Protein interactions for RNA: ENST00000294816.6

LMX1A-201, Transcript of LIM homeobox transcription factor 1 alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene LMX1A, Length 3,350 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1A-201ENST00000294816 Q5VV11 94 aa6.53□□□□□ -1.36
LMX1A-201ENST00000294816 KRTAP7-1Q8IUC3 87 aa6.52□□□□□ -1.37
LMX1A-201ENST00000294816 INAFM1C9JVW0 142 aa6.51□□□□□ -1.37
LMX1A-201ENST00000294816 H3BNG1 76 aa6.51□□□□□ -1.37
LMX1A-201ENST00000294816 PDZD2O15018 2839 aa6.51□□□□□ -1.37
LMX1A-201ENST00000294816 UBE2AP49459 152 aa6.51□□□□□ -1.37
LMX1A-201ENST00000294816 LCE2DQ5TA82 110 aaPredicted RBP6.51□□□□□ -1.37
LMX1A-201ENST00000294816 PLA2G2DQ9UNK4 145 aa6.51□□□□□ -1.37
LMX1A-201ENST00000294816 TLX1NBP0CAT3 122 aa6.5□□□□□ -1.37
LMX1A-201ENST00000294816 A6NED7 52 aa6.5□□□□□ -1.37
LMX1A-201ENST00000294816 C11orf45Q8TAV5 145 aa6.5□□□□□ -1.37
LMX1A-201ENST00000294816 H0Y9J4 135 aa6.49□□□□□ -1.37
LMX1A-201ENST00000294816 TRRAPQ9Y4A5 3859 aa6.49□□□□□ -1.37
LMX1A-201ENST00000294816 Q8N9P0 234 aaPredicted RBP6.49□□□□□ -1.37
LMX1A-201ENST00000294816 TENM3Q9P273 2699 aa6.49□□□□□ -1.37
LMX1A-201ENST00000294816 IGLV5-37A0A075B6J1 123 aa6.48□□□□□ -1.37
LMX1A-201ENST00000294816 PCOTHQ58A44 107 aa6.48□□□□□ -1.37
LMX1A-201ENST00000294816 LIMD2Q9BT23 127 aa6.48□□□□□ -1.37
LMX1A-201ENST00000294816 HELZ2Q9BYK8 2649 aaKnown RBP6.47□□□□□ -1.37
LMX1A-201ENST00000294816 C16orf90A8MZG2 172 aa6.47□□□□□ -1.37
LMX1A-201ENST00000294816 TENM4Q6N022 2769 aa6.46□□□□□ -1.37
LMX1A-201ENST00000294816 DNAH10OSP0CZ25 163 aa6.46□□□□□ -1.38
LMX1A-201ENST00000294816 CNBPP62633 177 aaKnown RBP6.45□□□□□ -1.38
LMX1A-201ENST00000294816 COA5Q86WW8 74 aa6.45□□□□□ -1.38
LMX1A-201ENST00000294816 HECTD1Q9ULT8 2610 aa6.45□□□□□ -1.38
LMX1A-201ENST00000294816 KRTAP29-1A8MX34 341 aaPredicted RBP6.44□□□□□ -1.38
LMX1A-201ENST00000294816 LINC00588Q9Y4M8 146 aa6.44□□□□□ -1.38
LMX1A-201ENST00000294816 FLNBO75369 2602 aaKnown RBP6.44□□□□□ -1.38
LMX1A-201ENST00000294816 SPANXA2-OT1Q8N9U9 137 aa6.44□□□□□ -1.38
LMX1A-201ENST00000294816 KRTAP10-11P60412 298 aa6.43□□□□□ -1.38
LMX1A-201ENST00000294816 CD164Q04900 197 aa6.43□□□□□ -1.38
LMX1A-201ENST00000294816 A8MWP4 228 aa6.42□□□□□ -1.38
LMX1A-201ENST00000294816 H3BPC8 53 aa6.41□□□□□ -1.38
LMX1A-201ENST00000294816 SPAG11AQ6PDA7 123 aa6.41□□□□□ -1.38
LMX1A-201ENST00000294816 SRRM2Q9UQ35 2752 aaKnown RBP6.41□□□□□ -1.38
LMX1A-201ENST00000294816 NDUFS5O43920 106 aa6.41□□□□□ -1.38
LMX1A-201ENST00000294816 LCA10Q71F78 164 aa6.41□□□□□ -1.38
LMX1A-201ENST00000294816 KRTAP21-3Q3LHN1 58 aa6.4□□□□□ -1.38
LMX1A-201ENST00000294816 KTN1-AS1Q86SY8 53 aa6.4□□□□□ -1.38
LMX1A-201ENST00000294816 PHF5AQ7RTV0 110 aaKnown RBP6.4□□□□□ -1.39
LMX1A-201ENST00000294816 CHTF8P0CG12 524 aa6.39□□□□□ -1.39
LMX1A-201ENST00000294816 OTOGQ6ZRI0 2925 aa6.39□□□□□ -1.39
LMX1A-201ENST00000294816 NSD1Q96L73 2696 aaPredicted RBP6.39□□□□□ -1.39
LMX1A-201ENST00000294816 MAST4O15021 2626 aa6.39□□□□□ -1.39
LMX1A-201ENST00000294816 C9orf163Q8N9P6 203 aa6.38□□□□□ -1.39
LMX1A-201ENST00000294816 NOTCH1P46531 2555 aa6.38□□□□□ -1.39
LMX1A-201ENST00000294816 IGLV8-61A0A075B6I0 122 aa6.37□□□□□ -1.39
LMX1A-201ENST00000294816 ATP11AUNQ6ZP68 121 aa6.37□□□□□ -1.39
LMX1A-201ENST00000294816 Q75L30 129 aa6.37□□□□□ -1.39
LMX1A-201ENST00000294816 LINC00472Q9H8W2 130 aa6.37□□□□□ -1.39
LMX1A-201ENST00000294816 RBM12B-AS1Q9P1G2 102 aa6.37□□□□□ -1.39
LMX1A-201ENST00000294816 MMP24-AS1A0A0U1RRL7 71 aa6.36□□□□□ -1.39
LMX1A-201ENST00000294816 LOC101927531A0A1B0GV80 90 aa6.36□□□□□ -1.39
LMX1A-201ENST00000294816 IGLV9-49A0A0B4J1Y8 123 aa6.35□□□□□ -1.39
LMX1A-201ENST00000294816 IGLV7-46A0A075B6I9 117 aa6.35□□□□□ -1.39
LMX1A-201ENST00000294816 KRTAP11-1Q8IUC1 163 aa6.35□□□□□ -1.39
LMX1A-201ENST00000294816 COL6A5A8TX70 2615 aa6.33□□□□□ -1.4
LMX1A-201ENST00000294816 IGHV6-1A0A0B4J1U7 121 aa6.32□□□□□ -1.4
LMX1A-201ENST00000294816 CDC42SE1Q9NRR8 79 aa6.32□□□□□ -1.4
LMX1A-201ENST00000294816 MDFIQ99750 246 aa6.32□□□□□ -1.4
LMX1A-201ENST00000294816 STAB1Q9NY15 2570 aa6.31□□□□□ -1.4
LMX1A-201ENST00000294816 FBN1P35555 2871 aaKnown RBP6.31□□□□□ -1.4
LMX1A-201ENST00000294816 A6NN06 94 aa6.3□□□□□ -1.4
LMX1A-201ENST00000294816 SPINK7P58062 85 aa6.3□□□□□ -1.4
LMX1A-201ENST00000294816 CDK2AP2O75956 126 aa6.3□□□□□ -1.4
LMX1A-201ENST00000294816 MOBPQ13875 183 aa6.29□□□□□ -1.4
LMX1A-201ENST00000294816 UBE2DNLQ8IWF7 75 aa6.28□□□□□ -1.4
LMX1A-201ENST00000294816 LINC01558Q9Y6Z2 57 aa6.28□□□□□ -1.4
LMX1A-201ENST00000294816 NBEAL1Q6ZS30 2694 aa6.28□□□□□ -1.4
LMX1A-201ENST00000294816 KRTAP1-5Q9BYS1 174 aa6.28□□□□□ -1.4
LMX1A-201ENST00000294816 C8orf17Q9NRJ1 99 aa6.28□□□□□ -1.4
LMX1A-201ENST00000294816 HRES1P13985 223 aa6.27□□□□□ -1.41
LMX1A-201ENST00000294816 TP53AIP1Q9HCN2 124 aa6.27□□□□□ -1.41
LMX1A-201ENST00000294816 SPRR1BP22528 89 aa6.27□□□□□ -1.41
LMX1A-201ENST00000294816 C7orf65Q6ZTY9 151 aa6.26□□□□□ -1.41
LMX1A-201ENST00000294816 PRR26Q8N8Z3 221 aa6.26□□□□□ -1.41
LMX1A-201ENST00000294816 SPINK6Q6UWN8 80 aa6.24□□□□□ -1.41
LMX1A-201ENST00000294816 FAM229AH3BQW9 127 aa6.23□□□□□ -1.41
LMX1A-201ENST00000294816 CSMD3Q7Z407 3707 aa6.23□□□□□ -1.41
LMX1A-201ENST00000294816 K7EIL1 84 aa6.23□□□□□ -1.41
LMX1A-201ENST00000294816 COL7A1Q02388 2944 aa6.22□□□□□ -1.41
LMX1A-201ENST00000294816 A0A1B0GVX0 72 aa6.22□□□□□ -1.41
LMX1A-201ENST00000294816 Q96NJ1 140 aa6.22□□□□□ -1.41
LMX1A-201ENST00000294816 MRPL34Q9BQ48 92 aaKnown RBP6.21□□□□□ -1.41
LMX1A-201ENST00000294816 ANAPC11Q9NYG5 84 aa6.21□□□□□ -1.42
LMX1A-201ENST00000294816 A0A087X002 238 aa6.21□□□□□ -1.42
LMX1A-201ENST00000294816 Q6ZR54 194 aa6.21□□□□□ -1.42
LMX1A-201ENST00000294816 NOTCH2NLQ7Z3S9 236 aa6.21□□□□□ -1.42
LMX1A-201ENST00000294816 TENM2Q9NT68 2774 aa6.21□□□□□ -1.42
LMX1A-201ENST00000294816 PANO1I0J062 215 aa6.2□□□□□ -1.42
LMX1A-201ENST00000294816 C14orf177Q52M58 125 aa6.2□□□□□ -1.42
LMX1A-201ENST00000294816 PRAC1Q96KF2 57 aa6.2□□□□□ -1.42
LMX1A-201ENST00000294816 ANK2Q01484 3957 aa6.19□□□□□ -1.42
LMX1A-201ENST00000294816 DNAH10Q8IVF4 4471 aa6.19□□□□□ -1.42
LMX1A-201ENST00000294816 PLAC8Q9NZF1 115 aa6.19□□□□□ -1.42
LMX1A-201ENST00000294816 H3BS24 57 aa6.18□□□□□ -1.42
LMX1A-201ENST00000294816 RETNLBQ9BQ08 111 aa6.17□□□□□ -1.42
LMX1A-201ENST00000294816 KRTAP24-1Q3LI83 254 aa6.16□□□□□ -1.42
LMX1A-201ENST00000294816 ASB16-AS1Q495Z4 193 aa6.16□□□□□ -1.42
LMX1A-201ENST00000294816 LINC00313P59037 77 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms