RNA–Protein interactions for RNA: ENST00000279452.10

CD44-204, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-204ENST00000279452 SNCGO76070 127 aa3.79□□□□□ -1.8
CD44-204ENST00000279452 PSMB2P49721 201 aa3.79□□□□□ -1.8
CD44-204ENST00000279452 HRCT1Q6UXD1 115 aa3.79□□□□□ -1.8
CD44-204ENST00000279452 LINC00575Q6W349 94 aa3.79□□□□□ -1.8
CD44-204ENST00000279452 Q6ZQY7 126 aa3.79□□□□□ -1.8
CD44-204ENST00000279452 PRO1854Q9UHT4 67 aa3.79□□□□□ -1.8
CD44-204ENST00000279452 SPRR1BP22528 89 aa3.78□□□□□ -1.8
CD44-204ENST00000279452 SSBP3-AS1Q7Z2R9 100 aa3.78□□□□□ -1.8
CD44-204ENST00000279452 HERC1Q15751 4861 aa3.77□□□□□ -1.81
CD44-204ENST00000279452 SPINK1P00995 79 aa3.77□□□□□ -1.81
CD44-204ENST00000279452 LCE3BQ5TA77 95 aa3.77□□□□□ -1.81
CD44-204ENST00000279452 KRTAP4-12Q9BQ66 201 aa3.77□□□□□ -1.81
CD44-204ENST00000279452 IGLV5-48A0A075B6I7 105 aa3.76□□□□□ -1.81
CD44-204ENST00000279452 TSTD3H0UI37 97 aa3.76□□□□□ -1.81
CD44-204ENST00000279452 H0YGX0 51 aa3.76□□□□□ -1.81
CD44-204ENST00000279452 TRIAP1O43715 76 aa3.76□□□□□ -1.81
CD44-204ENST00000279452 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.76□□□□□ -1.81
CD44-204ENST00000279452 M0R143 59 aa3.75□□□□□ -1.81
CD44-204ENST00000279452 COX6CP09669 75 aa3.75□□□□□ -1.81
CD44-204ENST00000279452 LINC01547P58512 204 aaPredicted RBP3.75□□□□□ -1.81
CD44-204ENST00000279452 Q8N377 158 aa3.75□□□□□ -1.81
CD44-204ENST00000279452 SNHG12Q9BXW3 62 aa3.75□□□□□ -1.81
CD44-204ENST00000279452 IGLV7-46A0A075B6I9 117 aa3.74□□□□□ -1.81
CD44-204ENST00000279452 A0A0G2JQZ4 141 aa3.74□□□□□ -1.81
CD44-204ENST00000279452 LOC105371267A0A1B0GV96 52 aa3.74□□□□□ -1.81
CD44-204ENST00000279452 DNAL4O96015 105 aa3.74□□□□□ -1.81
CD44-204ENST00000279452 SCGB1C2P0DMR2 95 aa3.74□□□□□ -1.81
CD44-204ENST00000279452 BATFQ16520 125 aa3.74□□□□□ -1.81
CD44-204ENST00000279452 SMIM29Q86T20 159 aa3.74□□□□□ -1.81
CD44-204ENST00000279452 CLEC2BQ92478 149 aa3.74□□□□□ -1.81
CD44-204ENST00000279452 FAM218AQ96MZ4 157 aa3.74□□□□□ -1.81
CD44-204ENST00000279452 LIMD2Q9BT23 127 aa3.74□□□□□ -1.81
CD44-204ENST00000279452 GHRHP01286 108 aa3.73□□□□□ -1.81
CD44-204ENST00000279452 FABP2P12104 132 aa3.73□□□□□ -1.81
CD44-204ENST00000279452 TNXBP22105 4242 aa3.72□□□□□ -1.81
CD44-204ENST00000279452 A0A1B0GV72 72 aa3.72□□□□□ -1.81
CD44-204ENST00000279452 H3BUT2 72 aa3.72□□□□□ -1.81
CD44-204ENST00000279452 RPS29P62273 56 aaKnown RBP3.72□□□□□ -1.81
CD44-204ENST00000279452 OCIAD2Q56VL3 154 aa3.72□□□□□ -1.81
CD44-204ENST00000279452 KRTAP19-1Q8IUB9 90 aa3.72□□□□□ -1.81
CD44-204ENST00000279452 PPDPFLQ8WWR9 84 aa3.72□□□□□ -1.81
CD44-204ENST00000279452 CDIP1Q9H305 208 aa3.72□□□□□ -1.81
CD44-204ENST00000279452 A0A1B0GX51 115 aa3.71□□□□□ -1.82
CD44-204ENST00000279452 PCP4L1A6NKN8 68 aa3.71□□□□□ -1.82
CD44-204ENST00000279452 Q6JHZ5 121 aa3.71□□□□□ -1.82
CD44-204ENST00000279452 FP248Q71RG6 208 aaPredicted RBP3.71□□□□□ -1.82
CD44-204ENST00000279452 NDUFV3P56181 108 aaKnown RBP3.7□□□□□ -1.82
CD44-204ENST00000279452 CD164Q04900 197 aa3.7□□□□□ -1.82
CD44-204ENST00000279452 NAA38Q9BRA0 125 aaKnown RBP3.7□□□□□ -1.82
CD44-204ENST00000279452 ORMDL1Q9P0S3 153 aa3.7□□□□□ -1.82
CD44-204ENST00000279452 HMCN2Q8NDA2 5059 aa3.69□□□□□ -1.82
CD44-204ENST00000279452 H3BMG7 143 aa3.69□□□□□ -1.82
CD44-204ENST00000279452 IGFL1Q6UW32 110 aa3.69□□□□□ -1.82
CD44-204ENST00000279452 TCL1BO95988 128 aa3.68□□□□□ -1.82
CD44-204ENST00000279452 TPRXLQ17RH7 258 aa3.68□□□□□ -1.82
CD44-204ENST00000279452 KRTAP9-9Q9BYP9 154 aa3.68□□□□□ -1.82
CD44-204ENST00000279452 KRTAP9-4Q9BYQ2 154 aa3.68□□□□□ -1.82
CD44-204ENST00000279452 IGLV8-61A0A075B6I0 122 aa3.67□□□□□ -1.82
CD44-204ENST00000279452 LST1O00453 97 aa3.67□□□□□ -1.82
CD44-204ENST00000279452 LYRM7Q5U5X0 104 aa3.67□□□□□ -1.82
CD44-204ENST00000279452 TRBV7-7A0A0K0K1E9 115 aa3.66□□□□□ -1.82
CD44-204ENST00000279452 C9orf92A6NGG3 77 aa3.66□□□□□ -1.82
CD44-204ENST00000279452 H3BQ85 93 aa3.66□□□□□ -1.82
CD44-204ENST00000279452 TMEM256-PLSCR3K7ERE1 68 aa3.66□□□□□ -1.82
CD44-204ENST00000279452 TRACP01848 142 aa3.66□□□□□ -1.82
CD44-204ENST00000279452 ATXN8Q156A1 80 aa3.66□□□□□ -1.82
CD44-204ENST00000279452 KRTAP13-3Q3SY46 172 aa3.65□□□□□ -1.83
CD44-204ENST00000279452 ANKRD29Q8N6D5 301 aa3.65□□□□□ -1.83
CD44-204ENST00000279452 VPS25Q9BRG1 176 aa3.65□□□□□ -1.83
CD44-204ENST00000279452 A0A087WSZ3 146 aa3.64□□□□□ -1.83
CD44-204ENST00000279452 BAALC-AS2P0C853 105 aa3.64□□□□□ -1.83
CD44-204ENST00000279452 C1orf195Q5TG92 126 aa3.64□□□□□ -1.83
CD44-204ENST00000279452 Q5XG85 94 aa3.64□□□□□ -1.83
CD44-204ENST00000279452 TEN1Q86WV5 123 aa3.64□□□□□ -1.83
CD44-204ENST00000279452 SS18L2Q9UHA2 77 aa3.64□□□□□ -1.83
CD44-204ENST00000279452 UBE2V1Q13404 147 aa3.63□□□□□ -1.83
CD44-204ENST00000279452 DSCR8Q96T75 97 aa3.63□□□□□ -1.83
CD44-204ENST00000279452 TRBV20-1A0A075B6N2 111 aa3.62□□□□□ -1.83
CD44-204ENST00000279452 C9orf118A6NHY6 69 aa3.62□□□□□ -1.83
CD44-204ENST00000279452 C9JAW5 83 aa3.62□□□□□ -1.83
CD44-204ENST00000279452 CCKP06307 115 aa3.62□□□□□ -1.83
CD44-204ENST00000279452 RBM3P98179 157 aaKnown RBP3.62□□□□□ -1.83
CD44-204ENST00000279452 LPAP08519 4548 aa3.62□□□□□ -1.83
CD44-204ENST00000279452 KRTAP4-8A0A0G2JLE6 195 aa3.61□□□□□ -1.83
CD44-204ENST00000279452 A0A1W2PNM2 257 aa3.61□□□□□ -1.83
CD44-204ENST00000279452 TAX1BP3O14907 124 aa3.61□□□□□ -1.83
CD44-204ENST00000279452 Q6Q795 121 aa3.61□□□□□ -1.83
CD44-204ENST00000279452 SIGMAR1Q99720 223 aa3.61□□□□□ -1.83
CD44-204ENST00000279452 UBR4Q5T4S7 5183 aa3.6□□□□□ -1.83
CD44-204ENST00000279452 A0A1W2PPM0 123 aa3.6□□□□□ -1.83
CD44-204ENST00000279452 SEC61BP60468 96 aaKnown RBP3.6□□□□□ -1.83
CD44-204ENST00000279452 ASB16-AS1Q495Z4 193 aa3.6□□□□□ -1.83
CD44-204ENST00000279452 MTURNQ8N3F0 131 aa3.6□□□□□ -1.83
CD44-204ENST00000279452 LRP2P98164 4655 aa3.59□□□□□ -1.83
CD44-204ENST00000279452 TRBV7-4A0A0J9YYF1 115 aa3.59□□□□□ -1.83
CD44-204ENST00000279452 COL5A1-AS1Q5SY13 56 aa3.59□□□□□ -1.83
CD44-204ENST00000279452 SPCS1Q9Y6A9 102 aa3.59□□□□□ -1.83
CD44-204ENST00000279452 JMJD7-PLA2G4BH0Y9G9 81 aa3.58□□□□□ -1.84
CD44-204ENST00000279452 C14orf132Q9NPU4 83 aa3.58□□□□□ -1.84
CD44-204ENST00000279452 A0A0U1RQV1 116 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms