RNA–Protein interactions for RNA: ENST00000270722.9

PRDM16-201, Transcript of PR/SET domain 16, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRDM16, Length 8,690 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-201ENST00000270722 GCN1Q92616 2671 aaKnown RBP8.5□□□□□ -1.05
PRDM16-201ENST00000270722 ZNF292O60281 2723 aa8.5□□□□□ -1.05
PRDM16-201ENST00000270722 Q8N1X5 172 aa8.44□□□□□ -1.06
PRDM16-201ENST00000270722 KMT2BQ9UMN6 2715 aaPredicted RBP8.44□□□□□ -1.06
PRDM16-201ENST00000270722 KRTAP25-1Q3LHN0 102 aa8.41□□□□□ -1.06
PRDM16-201ENST00000270722 A6NN06 94 aa8.4□□□□□ -1.06
PRDM16-201ENST00000270722 UTP20O75691 2785 aaKnown RBP8.4□□□□□ -1.06
PRDM16-201ENST00000270722 NSD1Q96L73 2696 aaPredicted RBP8.39□□□□□ -1.07
PRDM16-201ENST00000270722 R4GN34 69 aa8.38□□□□□ -1.07
PRDM16-201ENST00000270722 CASC10Q5T4H9 136 aa8.38□□□□□ -1.07
PRDM16-201ENST00000270722 RPL37P61927 97 aaKnown RBP8.38□□□□□ -1.07
PRDM16-201ENST00000270722 A0A1W2PNN7 141 aa8.37□□□□□ -1.07
PRDM16-201ENST00000270722 NDUFAF8A1L188 74 aa8.37□□□□□ -1.07
PRDM16-201ENST00000270722 S4R3F8 94 aa8.36□□□□□ -1.07
PRDM16-201ENST00000270722 MAP1AP78559 2803 aaPredicted RBP8.34□□□□□ -1.07
PRDM16-201ENST00000270722 ANAPC11Q9NYG5 84 aa8.34□□□□□ -1.07
PRDM16-201ENST00000270722 GIG44P09565 113 aaPredicted RBP8.33□□□□□ -1.08
PRDM16-201ENST00000270722 A0A096LNT2 108 aa8.33□□□□□ -1.08
PRDM16-201ENST00000270722 PLAC4Q8WY50 150 aa8.33□□□□□ -1.08
PRDM16-201ENST00000270722 ZCCHC13Q8WW36 166 aaKnown RBP8.33□□□□□ -1.08
PRDM16-201ENST00000270722 OXTP01178 125 aa8.32□□□□□ -1.08
PRDM16-201ENST00000270722 ITPR2Q14571 2701 aa8.32□□□□□ -1.08
PRDM16-201ENST00000270722 CYSTM1Q9H1C7 97 aa8.31□□□□□ -1.08
PRDM16-201ENST00000270722 A0A1W2PNM2 257 aa8.3□□□□□ -1.08
PRDM16-201ENST00000270722 H1FX-AS1Q4G0G2 97 aa8.29□□□□□ -1.08
PRDM16-201ENST00000270722 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.29□□□□□ -1.08
PRDM16-201ENST00000270722 SPATA8Q6RVD6 105 aa8.28□□□□□ -1.08
PRDM16-201ENST00000270722 PLAC8Q9NZF1 115 aa8.28□□□□□ -1.08
PRDM16-201ENST00000270722 NOTCH2NLQ7Z3S9 236 aa8.18□□□□□ -1.1
PRDM16-201ENST00000270722 FLNCQ14315 2725 aa8.18□□□□□ -1.1
PRDM16-201ENST00000270722 KRTAP10-3P60369 221 aa8.17□□□□□ -1.1
PRDM16-201ENST00000270722 A0A0G2JQZ4 141 aa8.15□□□□□ -1.1
PRDM16-201ENST00000270722 Q6ZR54 194 aa8.15□□□□□ -1.11
PRDM16-201ENST00000270722 Q5VSD8 79 aa8.14□□□□□ -1.11
PRDM16-201ENST00000270722 UBR5O95071 2799 aaPredicted RBP8.12□□□□□ -1.11
PRDM16-201ENST00000270722 LCE6AA0A183 80 aa8.11□□□□□ -1.11
PRDM16-201ENST00000270722 C20orf166-AS1Q96NR2 134 aa8.11□□□□□ -1.11
PRDM16-201ENST00000270722 SPRR1BP22528 89 aa8.1□□□□□ -1.11
PRDM16-201ENST00000270722 GOLGB1Q14789 3259 aaKnown RBP8.1□□□□□ -1.11
PRDM16-201ENST00000270722 KRTAP1-3Q8IUG1 177 aa8.07□□□□□ -1.12
PRDM16-201ENST00000270722 KRTAP1-1Q07627 177 aa8.07□□□□□ -1.12
PRDM16-201ENST00000270722 MMP24-AS1A0A0U1RRL7 71 aa8.06□□□□□ -1.12
PRDM16-201ENST00000270722 M0QZ58 72 aa8.06□□□□□ -1.12
PRDM16-201ENST00000270722 SPRR1AP35321 89 aa8.06□□□□□ -1.12
PRDM16-201ENST00000270722 PP632Q6XCG6 107 aa8.04□□□□□ -1.12
PRDM16-201ENST00000270722 Q5W150 140 aa8.04□□□□□ -1.12
PRDM16-201ENST00000270722 CEP350Q5VT06 3117 aa8.03□□□□□ -1.12
PRDM16-201ENST00000270722 CHD9Q3L8U1 2897 aa8□□□□□ -1.13
PRDM16-201ENST00000270722 LINC00472Q9H8W2 130 aa7.98□□□□□ -1.13
PRDM16-201ENST00000270722 EP400Q96L91 3159 aa7.95□□□□□ -1.14
PRDM16-201ENST00000270722 RPS29P62273 56 aaKnown RBP7.93□□□□□ -1.14
PRDM16-201ENST00000270722 A8MUU9 505 aa7.92□□□□□ -1.14
PRDM16-201ENST00000270722 PANO1I0J062 215 aa7.92□□□□□ -1.14
PRDM16-201ENST00000270722 TRANK1O15050 2925 aa7.91□□□□□ -1.14
PRDM16-201ENST00000270722 HIVEP1P15822 2718 aa7.91□□□□□ -1.14
PRDM16-201ENST00000270722 Q8NDZ9 215 aa7.91□□□□□ -1.14
PRDM16-201ENST00000270722 NBEAL2Q6ZNJ1 2754 aa7.9□□□□□ -1.15
PRDM16-201ENST00000270722 APCP25054 2843 aa7.88□□□□□ -1.15
PRDM16-201ENST00000270722 TENM3Q9P273 2699 aa7.88□□□□□ -1.15
PRDM16-201ENST00000270722 ADM2Q7Z4H4 148 aa7.86□□□□□ -1.15
PRDM16-201ENST00000270722 DNAH12Q6ZR08 3092 aa7.79□□□□□ -1.16
PRDM16-201ENST00000270722 KRTAP10-1P60331 282 aa7.79□□□□□ -1.16
PRDM16-201ENST00000270722 KRTAP11-1Q8IUC1 163 aa7.77□□□□□ -1.16
PRDM16-201ENST00000270722 ITPR1Q14643 2758 aa7.75□□□□□ -1.17
PRDM16-201ENST00000270722 C10orf95Q9H7T3 257 aa7.74□□□□□ -1.17
PRDM16-201ENST00000270722 TENM4Q6N022 2769 aa7.72□□□□□ -1.17
PRDM16-201ENST00000270722 KRTAP26-1Q6PEX3 210 aa7.72□□□□□ -1.17
PRDM16-201ENST00000270722 TENM1Q9UKZ4 2725 aa7.71□□□□□ -1.17
PRDM16-201ENST00000270722 KALRNO60229 2985 aa7.68□□□□□ -1.18
PRDM16-201ENST00000270722 KRTAP10-2P60368 255 aa7.68□□□□□ -1.18
PRDM16-201ENST00000270722 KRTAP1-5Q9BYS1 174 aa7.67□□□□□ -1.18
PRDM16-201ENST00000270722 PCNTO95613 3336 aa7.67□□□□□ -1.18
PRDM16-201ENST00000270722 KRTAP21-3Q3LHN1 58 aa7.67□□□□□ -1.18
PRDM16-201ENST00000270722 UTRNP46939 3433 aa7.67□□□□□ -1.18
PRDM16-201ENST00000270722 NIPBLQ6KC79 2804 aaeCLIP7.66□□□□□ -1.18
PRDM16-201ENST00000270722 KRTAP29-1A8MX34 341 aaPredicted RBP7.66□□□□□ -1.18
PRDM16-201ENST00000270722 DSPP15924 2871 aaKnown RBP7.66□□□□□ -1.18
PRDM16-201ENST00000270722 TNP1P09430 55 aa7.66□□□□□ -1.18
PRDM16-201ENST00000270722 KRTAP4-16G5E9R7 235 aaPredicted RBP7.63□□□□□ -1.19
PRDM16-201ENST00000270722 NF1P21359 2839 aa7.63□□□□□ -1.19
PRDM16-201ENST00000270722 A0A0C4DFX4 3053 aa7.58□□□□□ -1.2
PRDM16-201ENST00000270722 FRYQ5TBA9 3013 aa7.58□□□□□ -1.2
PRDM16-201ENST00000270722 C5orf42Q9H799 3197 aa7.58□□□□□ -1.2
PRDM16-201ENST00000270722 P0C880 135 aa7.56□□□□□ -1.2
PRDM16-201ENST00000270722 MGAQ8IWI9 3026 aa7.55□□□□□ -1.2
PRDM16-201ENST00000270722 A8MU10 97 aa7.5□□□□□ -1.21
PRDM16-201ENST00000270722 PRO2289Q9P1D8 64 aa7.47□□□□□ -1.21
PRDM16-201ENST00000270722 LAMA2P24043 3122 aaKnown RBP7.47□□□□□ -1.21
PRDM16-201ENST00000270722 CFAP54Q96N23 3096 aa7.44□□□□□ -1.22
PRDM16-201ENST00000270722 Q6ZRN7 208 aaPredicted RBP7.42□□□□□ -1.22
PRDM16-201ENST00000270722 REV3LO60673 3130 aa7.38□□□□□ -1.23
PRDM16-201ENST00000270722 CELSR2Q9HCU4 2923 aa7.36□□□□□ -1.23
PRDM16-201ENST00000270722 CHD7Q9P2D1 2997 aa7.35□□□□□ -1.23
PRDM16-201ENST00000270722 PDZD2O15018 2839 aa7.35□□□□□ -1.23
PRDM16-201ENST00000270722 INE1O15225 51 aa7.32□□□□□ -1.24
PRDM16-201ENST00000270722 CRYBG3Q68DQ2 2970 aa7.31□□□□□ -1.24
PRDM16-201ENST00000270722 FRYLO94915 3013 aa7.3□□□□□ -1.24
PRDM16-201ENST00000270722 XIRP2A4UGR9 3374 aa7.28□□□□□ -1.24
PRDM16-201ENST00000270722 KRTAP10-8P60410 259 aa7.27□□□□□ -1.25
PRDM16-201ENST00000270722 TENM2Q9NT68 2774 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms