RNA–Protein interactions for RNA: ENST00000268603.8

CDH11-201, Transcript of cadherin 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH11, Length 6,857 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-201ENST00000268603 MGAQ8IWI9 3026 aa7.96□□□□□ -1.14
CDH11-201ENST00000268603 Q75L30 129 aa7.95□□□□□ -1.14
CDH11-201ENST00000268603 LAMA1P25391 3075 aa7.95□□□□□ -1.14
CDH11-201ENST00000268603 GIG44P09565 113 aaPredicted RBP7.93□□□□□ -1.14
CDH11-201ENST00000268603 EPG5Q9HCE0 2579 aa7.93□□□□□ -1.14
CDH11-201ENST00000268603 ZCCHC13Q8WW36 166 aaKnown RBP7.93□□□□□ -1.14
CDH11-201ENST00000268603 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.93□□□□□ -1.14
CDH11-201ENST00000268603 FREM2Q5SZK8 3169 aa7.91□□□□□ -1.14
CDH11-201ENST00000268603 M0QZ58 72 aa7.89□□□□□ -1.15
CDH11-201ENST00000268603 SPEGQ15772 3267 aa7.87□□□□□ -1.15
CDH11-201ENST00000268603 Q8N9P0 234 aaPredicted RBP7.86□□□□□ -1.15
CDH11-201ENST00000268603 ROMO1P60602 79 aa7.85□□□□□ -1.15
CDH11-201ENST00000268603 OCR1Q9BZK8 76 aa7.84□□□□□ -1.15
CDH11-201ENST00000268603 LINC01558Q9Y6Z2 57 aa7.84□□□□□ -1.15
CDH11-201ENST00000268603 CENPEQ02224 2701 aa7.83□□□□□ -1.16
CDH11-201ENST00000268603 FAM229BQ4G0N7 80 aa7.82□□□□□ -1.16
CDH11-201ENST00000268603 CR1P17927 2039 aa7.8□□□□□ -1.16
CDH11-201ENST00000268603 RPL37P61927 97 aaKnown RBP7.78□□□□□ -1.16
CDH11-201ENST00000268603 DSPP15924 2871 aaKnown RBP7.77□□□□□ -1.17
CDH11-201ENST00000268603 FRYQ5TBA9 3013 aa7.77□□□□□ -1.17
CDH11-201ENST00000268603 MAP1AP78559 2803 aaPredicted RBP7.77□□□□□ -1.17
CDH11-201ENST00000268603 KRTAP16-1A8MUX0 517 aa7.75□□□□□ -1.17
CDH11-201ENST00000268603 USP24Q9UPU5 2620 aa7.74□□□□□ -1.17
CDH11-201ENST00000268603 ADM2Q7Z4H4 148 aa7.74□□□□□ -1.17
CDH11-201ENST00000268603 FRYLO94915 3013 aa7.74□□□□□ -1.17
CDH11-201ENST00000268603 HECTD1Q9ULT8 2610 aa7.74□□□□□ -1.17
CDH11-201ENST00000268603 KLK9Q2XQG4 91 aa7.74□□□□□ -1.17
CDH11-201ENST00000268603 Q5W150 140 aa7.73□□□□□ -1.17
CDH11-201ENST00000268603 NBEAQ8NFP9 2946 aa7.73□□□□□ -1.17
CDH11-201ENST00000268603 FP248Q71RG6 208 aaPredicted RBP7.72□□□□□ -1.17
CDH11-201ENST00000268603 C20orf166-AS1Q96NR2 134 aa7.71□□□□□ -1.17
CDH11-201ENST00000268603 EYSQ5T1H1 3165 aa7.71□□□□□ -1.18
CDH11-201ENST00000268603 MMP24-AS1A0A0U1RRL7 71 aa7.71□□□□□ -1.18
CDH11-201ENST00000268603 PLAC8Q9NZF1 115 aa7.71□□□□□ -1.18
CDH11-201ENST00000268603 Q5VV11 94 aa7.7□□□□□ -1.18
CDH11-201ENST00000268603 FLNBO75369 2602 aaKnown RBP7.7□□□□□ -1.18
CDH11-201ENST00000268603 COL6A3P12111 3177 aa7.68□□□□□ -1.18
CDH11-201ENST00000268603 OXTP01178 125 aa7.67□□□□□ -1.18
CDH11-201ENST00000268603 A0A096LNT2 108 aa7.66□□□□□ -1.18
CDH11-201ENST00000268603 BOD1L1Q8NFC6 3051 aa7.66□□□□□ -1.18
CDH11-201ENST00000268603 AKAP13Q12802 2813 aa7.65□□□□□ -1.18
CDH11-201ENST00000268603 MYO15AQ9UKN7 3530 aa7.65□□□□□ -1.19
CDH11-201ENST00000268603 FLNAP21333 2647 aaKnown RBP7.64□□□□□ -1.19
CDH11-201ENST00000268603 Q5XG85 94 aa7.64□□□□□ -1.19
CDH11-201ENST00000268603 SPATA8Q6RVD6 105 aa7.63□□□□□ -1.19
CDH11-201ENST00000268603 FLG2Q5D862 2391 aaPredicted RBP7.63□□□□□ -1.19
CDH11-201ENST00000268603 ITPR3Q14573 2671 aa7.61□□□□□ -1.19
CDH11-201ENST00000268603 ZNF292O60281 2723 aa7.6□□□□□ -1.19
CDH11-201ENST00000268603 SPTBN5Q9NRC6 3674 aaKnown RBP7.6□□□□□ -1.19
CDH11-201ENST00000268603 MGAM2Q2M2H8 2515 aa7.59□□□□□ -1.19
CDH11-201ENST00000268603 LCE6AA0A183 80 aa7.59□□□□□ -1.2
CDH11-201ENST00000268603 KALRNO60229 2985 aa7.57□□□□□ -1.2
CDH11-201ENST00000268603 KRTAP1-3Q8IUG1 177 aa7.57□□□□□ -1.2
CDH11-201ENST00000268603 CFAP46Q8IYW2 2715 aa7.57□□□□□ -1.2
CDH11-201ENST00000268603 Q8NDZ9 215 aa7.57□□□□□ -1.2
CDH11-201ENST00000268603 KRTAP10-1P60331 282 aa7.56□□□□□ -1.2
CDH11-201ENST00000268603 ATRQ13535 2644 aa7.55□□□□□ -1.2
CDH11-201ENST00000268603 CHD6Q8TD26 2715 aa7.55□□□□□ -1.2
CDH11-201ENST00000268603 ADGRG4Q8IZF6 3080 aa7.54□□□□□ -1.2
CDH11-201ENST00000268603 KRTAP1-1Q07627 177 aa7.54□□□□□ -1.2
CDH11-201ENST00000268603 REV3LO60673 3130 aa7.52□□□□□ -1.21
CDH11-201ENST00000268603 KRTAP10-2P60368 255 aa7.52□□□□□ -1.21
CDH11-201ENST00000268603 CFAP47Q6ZTR5 3102 aa7.5□□□□□ -1.21
CDH11-201ENST00000268603 LINC00472Q9H8W2 130 aa7.48□□□□□ -1.21
CDH11-201ENST00000268603 USP34Q70CQ2 3546 aa7.47□□□□□ -1.21
CDH11-201ENST00000268603 CYSTM1Q9H1C7 97 aa7.47□□□□□ -1.21
CDH11-201ENST00000268603 ATMQ13315 3056 aa7.47□□□□□ -1.21
CDH11-201ENST00000268603 Q6ZR54 194 aa7.46□□□□□ -1.22
CDH11-201ENST00000268603 LRBAP50851 2863 aa7.44□□□□□ -1.22
CDH11-201ENST00000268603 A8MUU9 505 aa7.44□□□□□ -1.22
CDH11-201ENST00000268603 HELZ2Q9BYK8 2649 aaKnown RBP7.43□□□□□ -1.22
CDH11-201ENST00000268603 SPRR1BP22528 89 aa7.43□□□□□ -1.22
CDH11-201ENST00000268603 PANO1I0J062 215 aa7.43□□□□□ -1.22
CDH11-201ENST00000268603 MAST4O15021 2626 aa7.43□□□□□ -1.22
CDH11-201ENST00000268603 KRTAP26-1Q6PEX3 210 aa7.42□□□□□ -1.22
CDH11-201ENST00000268603 NDUFAF8A1L188 74 aa7.42□□□□□ -1.22
CDH11-201ENST00000268603 DMXL2Q8TDJ6 3036 aa7.41□□□□□ -1.22
CDH11-201ENST00000268603 ASB16-AS1Q495Z4 193 aa7.4□□□□□ -1.22
CDH11-201ENST00000268603 C10orf95Q9H7T3 257 aa7.4□□□□□ -1.23
CDH11-201ENST00000268603 KRTAP25-1Q3LHN0 102 aa7.39□□□□□ -1.23
CDH11-201ENST00000268603 SPRR1AP35321 89 aa7.39□□□□□ -1.23
CDH11-201ENST00000268603 LOC400499M0QZD8 3231 aa7.39□□□□□ -1.23
CDH11-201ENST00000268603 GCN1Q92616 2671 aaKnown RBP7.39□□□□□ -1.23
CDH11-201ENST00000268603 TACC2O95359 2948 aa7.39□□□□□ -1.23
CDH11-201ENST00000268603 NBEAL2Q6ZNJ1 2754 aa7.38□□□□□ -1.23
CDH11-201ENST00000268603 KRTAP1-5Q9BYS1 174 aa7.37□□□□□ -1.23
CDH11-201ENST00000268603 COL12A1Q99715 3063 aa7.37□□□□□ -1.23
CDH11-201ENST00000268603 WDFY3Q8IZQ1 3526 aa7.36□□□□□ -1.23
CDH11-201ENST00000268603 TEX15Q9BXT5 2789 aa7.35□□□□□ -1.23
CDH11-201ENST00000268603 A8MU10 97 aa7.34□□□□□ -1.23
CDH11-201ENST00000268603 TEP1Q99973 2627 aaKnown RBP7.34□□□□□ -1.23
CDH11-201ENST00000268603 ZZEF1O43149 2961 aa7.32□□□□□ -1.24
CDH11-201ENST00000268603 TNP1P09430 55 aa7.31□□□□□ -1.24
CDH11-201ENST00000268603 A0A087X002 238 aa7.29□□□□□ -1.24
CDH11-201ENST00000268603 UNC79Q9P2D8 2635 aa7.27□□□□□ -1.25
CDH11-201ENST00000268603 DMXL1Q9Y485 3027 aa7.27□□□□□ -1.25
CDH11-201ENST00000268603 IGSF10Q6WRI0 2623 aa7.27□□□□□ -1.25
CDH11-201ENST00000268603 ASH1LQ9NR48 2969 aaKnown RBP7.26□□□□□ -1.25
CDH11-201ENST00000268603 ITPR1Q14643 2758 aa7.25□□□□□ -1.25
CDH11-201ENST00000268603 FLNCQ14315 2725 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms