RNA–Protein interactions for RNA: ENST00000266880.11

CHFR-201, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2 BASIC

Gene CHFR, Length 11,133 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-201ENST00000266880 S4R3F8 94 aa7.09□□□□□ -1.28
CHFR-201ENST00000266880 ITPR2Q14571 2701 aa7.08□□□□□ -1.28
CHFR-201ENST00000266880 SETXQ7Z333 2677 aaKnown RBP7.08□□□□□ -1.28
CHFR-201ENST00000266880 A0A087WTM6 91 aa7.07□□□□□ -1.28
CHFR-201ENST00000266880 UTP20O75691 2785 aaKnown RBP7.07□□□□□ -1.28
CHFR-201ENST00000266880 KRTAP10-11P60412 298 aa7.06□□□□□ -1.28
CHFR-201ENST00000266880 KRTAP24-1Q3LI83 254 aa7.06□□□□□ -1.28
CHFR-201ENST00000266880 Q6ZSA8 131 aa7.04□□□□□ -1.28
CHFR-201ENST00000266880 ROMO1P60602 79 aa7.03□□□□□ -1.28
CHFR-201ENST00000266880 M0R2T5 61 aa7.02□□□□□ -1.29
CHFR-201ENST00000266880 WWC2-AS2Q96NR7 200 aa7.01□□□□□ -1.29
CHFR-201ENST00000266880 C19orf73Q9NVV2 129 aa7□□□□□ -1.29
CHFR-201ENST00000266880 H1FX-AS1Q4G0G2 97 aa6.99□□□□□ -1.29
CHFR-201ENST00000266880 APCP25054 2843 aa6.98□□□□□ -1.29
CHFR-201ENST00000266880 NBEAL2Q6ZNJ1 2754 aa6.98□□□□□ -1.29
CHFR-201ENST00000266880 ZCCHC13Q8WW36 166 aaKnown RBP6.98□□□□□ -1.29
CHFR-201ENST00000266880 CEP350Q5VT06 3117 aa6.98□□□□□ -1.29
CHFR-201ENST00000266880 K7EIL1 84 aa6.98□□□□□ -1.29
CHFR-201ENST00000266880 Q5W150 140 aa6.97□□□□□ -1.29
CHFR-201ENST00000266880 MMP24-AS1A0A0U1RRL7 71 aa6.97□□□□□ -1.29
CHFR-201ENST00000266880 LINC00612Q8N6U2 182 aa6.97□□□□□ -1.29
CHFR-201ENST00000266880 TRANK1O15050 2925 aa6.97□□□□□ -1.29
CHFR-201ENST00000266880 KRTAP25-1Q3LHN0 102 aa6.95□□□□□ -1.3
CHFR-201ENST00000266880 IGSF10Q6WRI0 2623 aa6.95□□□□□ -1.3
CHFR-201ENST00000266880 ADM2Q7Z4H4 148 aa6.95□□□□□ -1.3
CHFR-201ENST00000266880 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.94□□□□□ -1.3
CHFR-201ENST00000266880 KLK9Q2XQG4 91 aa6.93□□□□□ -1.3
CHFR-201ENST00000266880 C10orf142B7Z368 130 aa6.93□□□□□ -1.3
CHFR-201ENST00000266880 A0A096LNT2 108 aa6.93□□□□□ -1.3
CHFR-201ENST00000266880 DNAH12Q6ZR08 3092 aa6.92□□□□□ -1.3
CHFR-201ENST00000266880 ITPR1Q14643 2758 aa6.92□□□□□ -1.3
CHFR-201ENST00000266880 RPL37P61927 97 aaKnown RBP6.91□□□□□ -1.3
CHFR-201ENST00000266880 KMT2BQ9UMN6 2715 aaPredicted RBP6.91□□□□□ -1.3
CHFR-201ENST00000266880 R4GN34 69 aa6.91□□□□□ -1.3
CHFR-201ENST00000266880 GOLGB1Q14789 3259 aaKnown RBP6.87□□□□□ -1.31
CHFR-201ENST00000266880 SPATA8Q6RVD6 105 aa6.86□□□□□ -1.31
CHFR-201ENST00000266880 PCNTO95613 3336 aa6.85□□□□□ -1.31
CHFR-201ENST00000266880 M0QZ58 72 aa6.85□□□□□ -1.31
CHFR-201ENST00000266880 A8MU10 97 aa6.83□□□□□ -1.32
CHFR-201ENST00000266880 KRTAP10-3P60369 221 aa6.83□□□□□ -1.32
CHFR-201ENST00000266880 PLAC4Q8WY50 150 aa6.82□□□□□ -1.32
CHFR-201ENST00000266880 UBR5O95071 2799 aaPredicted RBP6.81□□□□□ -1.32
CHFR-201ENST00000266880 A0A0C4DFX4 3053 aa6.81□□□□□ -1.32
CHFR-201ENST00000266880 CFAP54Q96N23 3096 aa6.81□□□□□ -1.32
CHFR-201ENST00000266880 DSPP15924 2871 aaKnown RBP6.8□□□□□ -1.32
CHFR-201ENST00000266880 Q6ZR54 194 aa6.79□□□□□ -1.32
CHFR-201ENST00000266880 LRBAP50851 2863 aa6.78□□□□□ -1.32
CHFR-201ENST00000266880 Q8NDZ9 215 aa6.77□□□□□ -1.33
CHFR-201ENST00000266880 C5orf42Q9H799 3197 aa6.77□□□□□ -1.33
CHFR-201ENST00000266880 LINC00472Q9H8W2 130 aa6.76□□□□□ -1.33
CHFR-201ENST00000266880 C20orf166-AS1Q96NR2 134 aa6.76□□□□□ -1.33
CHFR-201ENST00000266880 TNP2Q05952 138 aa6.76□□□□□ -1.33
CHFR-201ENST00000266880 UTRNP46939 3433 aa6.7□□□□□ -1.34
CHFR-201ENST00000266880 KRTAP26-1Q6PEX3 210 aa6.69□□□□□ -1.34
CHFR-201ENST00000266880 A8MUU9 505 aa6.68□□□□□ -1.34
CHFR-201ENST00000266880 SPRR1AP35321 89 aa6.63□□□□□ -1.35
CHFR-201ENST00000266880 A0A087X002 238 aa6.63□□□□□ -1.35
CHFR-201ENST00000266880 PLAC8Q9NZF1 115 aa6.62□□□□□ -1.35
CHFR-201ENST00000266880 PANO1I0J062 215 aa6.62□□□□□ -1.35
CHFR-201ENST00000266880 HIVEP1P15822 2718 aa6.62□□□□□ -1.35
CHFR-201ENST00000266880 C10orf95Q9H7T3 257 aa6.6□□□□□ -1.35
CHFR-201ENST00000266880 CHD9Q3L8U1 2897 aa6.58□□□□□ -1.36
CHFR-201ENST00000266880 LAMA2P24043 3122 aaKnown RBP6.58□□□□□ -1.36
CHFR-201ENST00000266880 SPRR1BP22528 89 aa6.57□□□□□ -1.36
CHFR-201ENST00000266880 MGAQ8IWI9 3026 aa6.5□□□□□ -1.37
CHFR-201ENST00000266880 KRTAP29-1A8MX34 341 aaPredicted RBP6.5□□□□□ -1.37
CHFR-201ENST00000266880 CELSR2Q9HCU4 2923 aa6.49□□□□□ -1.37
CHFR-201ENST00000266880 CHD7Q9P2D1 2997 aa6.49□□□□□ -1.37
CHFR-201ENST00000266880 Q5VSD8 79 aa6.48□□□□□ -1.37
CHFR-201ENST00000266880 NOTCH2NLQ7Z3S9 236 aa6.48□□□□□ -1.37
CHFR-201ENST00000266880 ASH1LQ9NR48 2969 aaKnown RBP6.48□□□□□ -1.37
CHFR-201ENST00000266880 TENM1Q9UKZ4 2725 aa6.46□□□□□ -1.37
CHFR-201ENST00000266880 KRTAP4-16G5E9R7 235 aaPredicted RBP6.46□□□□□ -1.38
CHFR-201ENST00000266880 TENM3Q9P273 2699 aa6.46□□□□□ -1.38
CHFR-201ENST00000266880 FLNCQ14315 2725 aa6.45□□□□□ -1.38
CHFR-201ENST00000266880 NF1P21359 2839 aa6.45□□□□□ -1.38
CHFR-201ENST00000266880 KRTAP1-5Q9BYS1 174 aa6.45□□□□□ -1.38
CHFR-201ENST00000266880 TRIOO75962 3097 aa6.45□□□□□ -1.38
CHFR-201ENST00000266880 KRTAP1-3Q8IUG1 177 aa6.44□□□□□ -1.38
CHFR-201ENST00000266880 KRTAP11-1Q8IUC1 163 aa6.44□□□□□ -1.38
CHFR-201ENST00000266880 KRTAP10-1P60331 282 aa6.44□□□□□ -1.38
CHFR-201ENST00000266880 FRYQ5TBA9 3013 aa6.43□□□□□ -1.38
CHFR-201ENST00000266880 KALRNO60229 2985 aa6.43□□□□□ -1.38
CHFR-201ENST00000266880 KRTAP1-1Q07627 177 aa6.43□□□□□ -1.38
CHFR-201ENST00000266880 LCE6AA0A183 80 aa6.4□□□□□ -1.39
CHFR-201ENST00000266880 VPS13AQ96RL7 3174 aa6.39□□□□□ -1.39
CHFR-201ENST00000266880 FRYLO94915 3013 aa6.39□□□□□ -1.39
CHFR-201ENST00000266880 KRTAP10-2P60368 255 aa6.37□□□□□ -1.39
CHFR-201ENST00000266880 NIPBLQ6KC79 2804 aaeCLIP6.35□□□□□ -1.39
CHFR-201ENST00000266880 PRUNE2Q8WUY3 3088 aa6.33□□□□□ -1.4
CHFR-201ENST00000266880 NBEAQ8NFP9 2946 aa6.33□□□□□ -1.4
CHFR-201ENST00000266880 FREM2Q5SZK8 3169 aa6.32□□□□□ -1.4
CHFR-201ENST00000266880 TNP1P09430 55 aa6.31□□□□□ -1.4
CHFR-201ENST00000266880 PDZD2O15018 2839 aa6.31□□□□□ -1.4
CHFR-201ENST00000266880 TACC2O95359 2948 aa6.31□□□□□ -1.4
CHFR-201ENST00000266880 XIRP2A4UGR9 3374 aa6.3□□□□□ -1.4
CHFR-201ENST00000266880 SRRM2Q9UQ35 2752 aaKnown RBP6.29□□□□□ -1.4
CHFR-201ENST00000266880 CRYBG3Q68DQ2 2970 aa6.27□□□□□ -1.41
CHFR-201ENST00000266880 TGP01266 2768 aa6.27□□□□□ -1.41
CHFR-201ENST00000266880 DMXL2Q8TDJ6 3036 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms