RNA–Protein interactions for RNA: ENST00000264645.11

CASC3-201, Transcript of CASC3, exon junction complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CASC3, Length 4,116 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-201ENST00000264645 DNAH10OSP0CZ25 163 aa9.69□□□□□ -0.86
CASC3-201ENST00000264645 SPRR4Q96PI1 79 aa9.69□□□□□ -0.86
CASC3-201ENST00000264645 TEP1Q99973 2627 aaKnown RBP9.69□□□□□ -0.86
CASC3-201ENST00000264645 Q5VV11 94 aa9.68□□□□□ -0.86
CASC3-201ENST00000264645 MDFIQ99750 246 aa9.68□□□□□ -0.86
CASC3-201ENST00000264645 MRPL34Q9BQ48 92 aaKnown RBP9.68□□□□□ -0.86
CASC3-201ENST00000264645 NBEAL1Q6ZS30 2694 aa9.67□□□□□ -0.86
CASC3-201ENST00000264645 CASC10Q5T4H9 136 aa9.67□□□□□ -0.86
CASC3-201ENST00000264645 C8orf17Q9NRJ1 99 aa9.66□□□□□ -0.86
CASC3-201ENST00000264645 PRR26Q8N8Z3 221 aa9.66□□□□□ -0.86
CASC3-201ENST00000264645 TLX1NBP0CAT3 122 aa9.63□□□□□ -0.87
CASC3-201ENST00000264645 PLA2G2DQ9UNK4 145 aa9.62□□□□□ -0.87
CASC3-201ENST00000264645 ASPMQ8IZT6 3477 aa9.62□□□□□ -0.87
CASC3-201ENST00000264645 KRTAP10-3P60369 221 aa9.62□□□□□ -0.87
CASC3-201ENST00000264645 UQCR11O14957 56 aa9.61□□□□□ -0.87
CASC3-201ENST00000264645 ZFHX4Q86UP3 3567 aa9.6□□□□□ -0.87
CASC3-201ENST00000264645 Q75L30 129 aa9.59□□□□□ -0.87
CASC3-201ENST00000264645 UTP20O75691 2785 aaKnown RBP9.59□□□□□ -0.87
CASC3-201ENST00000264645 CELSR2Q9HCU4 2923 aa9.58□□□□□ -0.88
CASC3-201ENST00000264645 A0A1B0GVX0 72 aa9.57□□□□□ -0.88
CASC3-201ENST00000264645 MIR22HGQ0VDD5 57 aa9.57□□□□□ -0.88
CASC3-201ENST00000264645 IGLV7-46A0A075B6I9 117 aa9.56□□□□□ -0.88
CASC3-201ENST00000264645 FBN2P35556 2912 aa9.55□□□□□ -0.88
CASC3-201ENST00000264645 NF1P21359 2839 aa9.55□□□□□ -0.88
CASC3-201ENST00000264645 STAB1Q9NY15 2570 aa9.55□□□□□ -0.88
CASC3-201ENST00000264645 PRAC1Q96KF2 57 aa9.54□□□□□ -0.88
CASC3-201ENST00000264645 CNBPP62633 177 aaKnown RBP9.54□□□□□ -0.88
CASC3-201ENST00000264645 APCP25054 2843 aa9.53□□□□□ -0.88
CASC3-201ENST00000264645 LINC00313P59037 77 aa9.53□□□□□ -0.88
CASC3-201ENST00000264645 HRNRQ86YZ3 2850 aaPredicted RBP9.52□□□□□ -0.89
CASC3-201ENST00000264645 ANAPC11Q9NYG5 84 aa9.52□□□□□ -0.89
CASC3-201ENST00000264645 IGSF10Q6WRI0 2623 aa9.52□□□□□ -0.89
CASC3-201ENST00000264645 IGLV5-52A0A0A0MRZ9 124 aa9.51□□□□□ -0.89
CASC3-201ENST00000264645 SPACA4Q8TDM5 124 aa9.51□□□□□ -0.89
CASC3-201ENST00000264645 IGLV5-37A0A075B6J1 123 aa9.5□□□□□ -0.89
CASC3-201ENST00000264645 FAM229AH3BQW9 127 aa9.49□□□□□ -0.89
CASC3-201ENST00000264645 SPINK7P58062 85 aa9.49□□□□□ -0.89
CASC3-201ENST00000264645 LINC01558Q9Y6Z2 57 aa9.48□□□□□ -0.89
CASC3-201ENST00000264645 A8MU10 97 aa9.47□□□□□ -0.89
CASC3-201ENST00000264645 SPRR1AP35321 89 aa9.47□□□□□ -0.89
CASC3-201ENST00000264645 KRTAP1-3Q8IUG1 177 aa9.47□□□□□ -0.89
CASC3-201ENST00000264645 ZCCHC13Q8WW36 166 aaKnown RBP9.47□□□□□ -0.89
CASC3-201ENST00000264645 CSMD1Q96PZ7 3565 aa9.47□□□□□ -0.89
CASC3-201ENST00000264645 C9orf163Q8N9P6 203 aa9.46□□□□□ -0.89
CASC3-201ENST00000264645 HIVEP1P15822 2718 aa9.46□□□□□ -0.9
CASC3-201ENST00000264645 LY6G6CO95867 125 aa9.45□□□□□ -0.9
CASC3-201ENST00000264645 KRTAP10-11P60412 298 aa9.44□□□□□ -0.9
CASC3-201ENST00000264645 MMP24-AS1A0A0U1RRL7 71 aa9.44□□□□□ -0.9
CASC3-201ENST00000264645 TNP2Q05952 138 aa9.43□□□□□ -0.9
CASC3-201ENST00000264645 NSD1Q96L73 2696 aaPredicted RBP9.42□□□□□ -0.9
CASC3-201ENST00000264645 NUPR2A6NF83 97 aa9.41□□□□□ -0.9
CASC3-201ENST00000264645 HRES1P13985 223 aa9.41□□□□□ -0.9
CASC3-201ENST00000264645 LINC01554Q52M75 96 aa9.41□□□□□ -0.9
CASC3-201ENST00000264645 RELNP78509 3460 aa9.41□□□□□ -0.9
CASC3-201ENST00000264645 DMDP11532 3685 aa9.39□□□□□ -0.91
CASC3-201ENST00000264645 DMBT1Q9UGM3 2413 aaPredicted RBP9.39□□□□□ -0.91
CASC3-201ENST00000264645 H3BS24 57 aa9.38□□□□□ -0.91
CASC3-201ENST00000264645 KRTAP1-1Q07627 177 aa9.38□□□□□ -0.91
CASC3-201ENST00000264645 NBDYA0A0U1RRE5 68 aa9.38□□□□□ -0.91
CASC3-201ENST00000264645 KRTAP26-1Q6PEX3 210 aa9.38□□□□□ -0.91
CASC3-201ENST00000264645 LINC00472Q9H8W2 130 aa9.38□□□□□ -0.91
CASC3-201ENST00000264645 SSBP3-AS1Q7Z2R9 100 aa9.37□□□□□ -0.91
CASC3-201ENST00000264645 DCHS2Q6V1P9 2916 aa9.37□□□□□ -0.91
CASC3-201ENST00000264645 STAB2Q8WWQ8 2551 aa9.36□□□□□ -0.91
CASC3-201ENST00000264645 SMG1Q96Q15 3661 aaKnown RBP9.35□□□□□ -0.91
CASC3-201ENST00000264645 RTL8CO15255 209 aa9.34□□□□□ -0.91
CASC3-201ENST00000264645 CRYBG3Q68DQ2 2970 aa9.34□□□□□ -0.91
CASC3-201ENST00000264645 KRTAP24-1Q3LI83 254 aa9.33□□□□□ -0.92
CASC3-201ENST00000264645 LAMA5O15230 3695 aa9.33□□□□□ -0.92
CASC3-201ENST00000264645 Q96NJ1 140 aa9.32□□□□□ -0.92
CASC3-201ENST00000264645 C1orf134Q5TEV5 83 aa9.32□□□□□ -0.92
CASC3-201ENST00000264645 ZNF861PO60384 105 aa9.32□□□□□ -0.92
CASC3-201ENST00000264645 KRTAP29-1A8MX34 341 aaPredicted RBP9.31□□□□□ -0.92
CASC3-201ENST00000264645 KRTAP4-16G5E9R7 235 aaPredicted RBP9.31□□□□□ -0.92
CASC3-201ENST00000264645 SPINT4Q6UDR6 99 aa9.31□□□□□ -0.92
CASC3-201ENST00000264645 LCE6AA0A183 80 aa9.3□□□□□ -0.92
CASC3-201ENST00000264645 MXRA5Q9NR99 2828 aa9.3□□□□□ -0.92
CASC3-201ENST00000264645 PSORS1C2Q9UIG4 136 aa9.29□□□□□ -0.92
CASC3-201ENST00000264645 NIPBLQ6KC79 2804 aaeCLIP9.29□□□□□ -0.92
CASC3-201ENST00000264645 MUC3AQ02505 3323 aa9.28□□□□□ -0.92
CASC3-201ENST00000264645 CELSR1Q9NYQ6 3014 aa9.28□□□□□ -0.92
CASC3-201ENST00000264645 ITPR2Q14571 2701 aa9.27□□□□□ -0.93
CASC3-201ENST00000264645 Q8N1X5 172 aa9.25□□□□□ -0.93
CASC3-201ENST00000264645 CSAG1Q6PB30 78 aa9.25□□□□□ -0.93
CASC3-201ENST00000264645 CUBNO60494 3623 aa9.24□□□□□ -0.93
CASC3-201ENST00000264645 A6NN06 94 aa9.23□□□□□ -0.93
CASC3-201ENST00000264645 K7EIL1 84 aa9.22□□□□□ -0.93
CASC3-201ENST00000264645 SPRR1BP22528 89 aa9.2□□□□□ -0.94
CASC3-201ENST00000264645 FLG2Q5D862 2391 aaPredicted RBP9.19□□□□□ -0.94
CASC3-201ENST00000264645 SVEP1Q4LDE5 3571 aa9.18□□□□□ -0.94
CASC3-201ENST00000264645 TYMSOSQ8TAI1 123 aa9.18□□□□□ -0.94
CASC3-201ENST00000264645 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.16□□□□□ -0.94
CASC3-201ENST00000264645 A0A087WTM6 91 aa9.15□□□□□ -0.94
CASC3-201ENST00000264645 IGLV7-43P04211 117 aa9.13□□□□□ -0.95
CASC3-201ENST00000264645 ADM2Q7Z4H4 148 aa9.12□□□□□ -0.95
CASC3-201ENST00000264645 PLA2G1BP04054 148 aaKnown RBP9.12□□□□□ -0.95
CASC3-201ENST00000264645 Q6ZR54 194 aa9.11□□□□□ -0.95
CASC3-201ENST00000264645 Q5W150 140 aa9.1□□□□□ -0.95
CASC3-201ENST00000264645 KRTAP7-1Q8IUC3 87 aa9.1□□□□□ -0.95
CASC3-201ENST00000264645 KRTAP1-5Q9BYS1 174 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 99.7 ms