RNA–Protein interactions for RNA: ENST00000264025.7

NECTIN1-201, Transcript of nectin cell adhesion molecule 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NECTIN1, Length 5,840 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN1-201ENST00000264025 Q5XG85 94 aa11.68□□□□□ -0.54
NECTIN1-201ENST00000264025 KRTAP1-5Q9BYS1 174 aa11.66□□□□□ -0.54
NECTIN1-201ENST00000264025 FP248Q71RG6 208 aaPredicted RBP11.66□□□□□ -0.54
NECTIN1-201ENST00000264025 CYSTM1Q9H1C7 97 aa11.65□□□□□ -0.54
NECTIN1-201ENST00000264025 Q5VV11 94 aa11.63□□□□□ -0.55
NECTIN1-201ENST00000264025 R4GN34 69 aa11.63□□□□□ -0.55
NECTIN1-201ENST00000264025 KRTAP26-1Q6PEX3 210 aa11.62□□□□□ -0.55
NECTIN1-201ENST00000264025 SEC61BP60468 96 aaKnown RBP11.61□□□□□ -0.55
NECTIN1-201ENST00000264025 PRAC1Q96KF2 57 aa11.6□□□□□ -0.55
NECTIN1-201ENST00000264025 STAB1Q9NY15 2570 aa11.58□□□□□ -0.56
NECTIN1-201ENST00000264025 Q5VSD8 79 aa11.56□□□□□ -0.56
NECTIN1-201ENST00000264025 CHD9Q3L8U1 2897 aa11.56□□□□□ -0.56
NECTIN1-201ENST00000264025 CFAP46Q8IYW2 2715 aa11.54□□□□□ -0.56
NECTIN1-201ENST00000264025 KRTAP10-1P60331 282 aa11.53□□□□□ -0.56
NECTIN1-201ENST00000264025 PCNTO95613 3336 aa11.53□□□□□ -0.56
NECTIN1-201ENST00000264025 RPL37P61927 97 aaKnown RBP11.48□□□□□ -0.57
NECTIN1-201ENST00000264025 KRTAP10-2P60368 255 aa11.48□□□□□ -0.57
NECTIN1-201ENST00000264025 LCE6AA0A183 80 aa11.48□□□□□ -0.57
NECTIN1-201ENST00000264025 HTTP42858 3142 aa11.45□□□□□ -0.58
NECTIN1-201ENST00000264025 ROMO1P60602 79 aa11.41□□□□□ -0.58
NECTIN1-201ENST00000264025 H1FX-AS1Q4G0G2 97 aa11.41□□□□□ -0.58
NECTIN1-201ENST00000264025 FLG2Q5D862 2391 aaPredicted RBP11.41□□□□□ -0.58
NECTIN1-201ENST00000264025 A0A0A0MQY5 61 aa11.41□□□□□ -0.58
NECTIN1-201ENST00000264025 AKAP13Q12802 2813 aa11.4□□□□□ -0.58
NECTIN1-201ENST00000264025 M0QZ58 72 aa11.4□□□□□ -0.58
NECTIN1-201ENST00000264025 Q6ZR54 194 aa11.4□□□□□ -0.59
NECTIN1-201ENST00000264025 KRTAP4-16G5E9R7 235 aaPredicted RBP11.39□□□□□ -0.59
NECTIN1-201ENST00000264025 CENPEQ02224 2701 aa11.37□□□□□ -0.59
NECTIN1-201ENST00000264025 NBEAL1Q6ZS30 2694 aa11.36□□□□□ -0.59
NECTIN1-201ENST00000264025 PANO1I0J062 215 aa11.34□□□□□ -0.59
NECTIN1-201ENST00000264025 CHD6Q8TD26 2715 aa11.34□□□□□ -0.59
NECTIN1-201ENST00000264025 RANBP2P49792 3224 aaKnown RBP11.33□□□□□ -0.59
NECTIN1-201ENST00000264025 KRTAP29-1A8MX34 341 aaPredicted RBP11.32□□□□□ -0.6
NECTIN1-201ENST00000264025 OXTP01178 125 aa11.31□□□□□ -0.6
NECTIN1-201ENST00000264025 TEX15Q9BXT5 2789 aa11.29□□□□□ -0.6
NECTIN1-201ENST00000264025 TRANK1O15050 2925 aa11.29□□□□□ -0.6
NECTIN1-201ENST00000264025 TEP1Q99973 2627 aaKnown RBP11.27□□□□□ -0.61
NECTIN1-201ENST00000264025 H3BS24 57 aa11.26□□□□□ -0.61
NECTIN1-201ENST00000264025 ADM2Q7Z4H4 148 aa11.26□□□□□ -0.61
NECTIN1-201ENST00000264025 A0A087X002 238 aa11.25□□□□□ -0.61
NECTIN1-201ENST00000264025 MGAQ8IWI9 3026 aa11.23□□□□□ -0.61
NECTIN1-201ENST00000264025 SPATA8Q6RVD6 105 aa11.22□□□□□ -0.61
NECTIN1-201ENST00000264025 PLAC4Q8WY50 150 aa11.2□□□□□ -0.62
NECTIN1-201ENST00000264025 CFAP54Q96N23 3096 aa11.2□□□□□ -0.62
NECTIN1-201ENST00000264025 ZNF292O60281 2723 aa11.18□□□□□ -0.62
NECTIN1-201ENST00000264025 LAMA3Q16787 3333 aa11.17□□□□□ -0.62
NECTIN1-201ENST00000264025 MKI67P46013 3256 aaKnown RBP11.17□□□□□ -0.62
NECTIN1-201ENST00000264025 ASB16-AS1Q495Z4 193 aa11.17□□□□□ -0.62
NECTIN1-201ENST00000264025 DMBT1Q9UGM3 2413 aaPredicted RBP11.16□□□□□ -0.62
NECTIN1-201ENST00000264025 UNC79Q9P2D8 2635 aa11.15□□□□□ -0.62
NECTIN1-201ENST00000264025 GCN1Q92616 2671 aaKnown RBP11.14□□□□□ -0.63
NECTIN1-201ENST00000264025 NOTCH2NLQ7Z3S9 236 aa11.13□□□□□ -0.63
NECTIN1-201ENST00000264025 COL6A5A8TX70 2615 aa11.13□□□□□ -0.63
NECTIN1-201ENST00000264025 SETXQ7Z333 2677 aaKnown RBP11.13□□□□□ -0.63
NECTIN1-201ENST00000264025 NOTCH1P46531 2555 aa11.1□□□□□ -0.63
NECTIN1-201ENST00000264025 RPS29P62273 56 aaKnown RBP11.09□□□□□ -0.63
NECTIN1-201ENST00000264025 A0A0C4DFX4 3053 aa11.07□□□□□ -0.64
NECTIN1-201ENST00000264025 KRTAP11-1Q8IUC1 163 aa11.05□□□□□ -0.64
NECTIN1-201ENST00000264025 BRCA2P51587 3418 aa11.02□□□□□ -0.65
NECTIN1-201ENST00000264025 Q6ZRN7 208 aaPredicted RBP11.01□□□□□ -0.65
NECTIN1-201ENST00000264025 WDFY4Q6ZS81 3184 aa10.99□□□□□ -0.65
NECTIN1-201ENST00000264025 LAMA2P24043 3122 aaKnown RBP10.98□□□□□ -0.65
NECTIN1-201ENST00000264025 STAB2Q8WWQ8 2551 aa10.95□□□□□ -0.66
NECTIN1-201ENST00000264025 KRTAP7-1Q8IUC3 87 aa10.94□□□□□ -0.66
NECTIN1-201ENST00000264025 A8MUU9 505 aa10.92□□□□□ -0.66
NECTIN1-201ENST00000264025 NBEAL2Q6ZNJ1 2754 aa10.89□□□□□ -0.67
NECTIN1-201ENST00000264025 KRTAP13-2Q52LG2 175 aa10.89□□□□□ -0.67
NECTIN1-201ENST00000264025 A8MU10 97 aa10.89□□□□□ -0.67
NECTIN1-201ENST00000264025 DSPP15924 2871 aaKnown RBP10.88□□□□□ -0.67
NECTIN1-201ENST00000264025 PRUNE2Q8WUY3 3088 aa10.88□□□□□ -0.67
NECTIN1-201ENST00000264025 KRTAP13-1Q8IUC0 172 aa10.87□□□□□ -0.67
NECTIN1-201ENST00000264025 IGSF10Q6WRI0 2623 aa10.86□□□□□ -0.67
NECTIN1-201ENST00000264025 TRIOO75962 3097 aa10.86□□□□□ -0.67
NECTIN1-201ENST00000264025 KRTAP25-1Q3LHN0 102 aa10.85□□□□□ -0.67
NECTIN1-201ENST00000264025 UNC80Q8N2C7 3258 aa10.83□□□□□ -0.68
NECTIN1-201ENST00000264025 A6NN06 94 aa10.82□□□□□ -0.68
NECTIN1-201ENST00000264025 UBR5O95071 2799 aaPredicted RBP10.8□□□□□ -0.68
NECTIN1-201ENST00000264025 XIRP2A4UGR9 3374 aa10.78□□□□□ -0.68
NECTIN1-201ENST00000264025 C20orf166-AS1Q96NR2 134 aa10.75□□□□□ -0.69
NECTIN1-201ENST00000264025 NSD1Q96L73 2696 aaPredicted RBP10.75□□□□□ -0.69
NECTIN1-201ENST00000264025 MAP1AP78559 2803 aaPredicted RBP10.74□□□□□ -0.69
NECTIN1-201ENST00000264025 BAHCC1Q9P281 2608 aa10.73□□□□□ -0.69
NECTIN1-201ENST00000264025 FRYQ5TBA9 3013 aa10.72□□□□□ -0.69
NECTIN1-201ENST00000264025 VPS13AQ96RL7 3174 aa10.71□□□□□ -0.69
NECTIN1-201ENST00000264025 KRTAP16-1A8MUX0 517 aa10.69□□□□□ -0.7
NECTIN1-201ENST00000264025 CDH23Q9H251 3354 aa10.68□□□□□ -0.7
NECTIN1-201ENST00000264025 ITPR2Q14571 2701 aa10.65□□□□□ -0.7
NECTIN1-201ENST00000264025 TNP1P09430 55 aa10.59□□□□□ -0.71
NECTIN1-201ENST00000264025 ITPR1Q14643 2758 aa10.52□□□□□ -0.73
NECTIN1-201ENST00000264025 CELSR3Q9NYQ7 3312 aa10.52□□□□□ -0.73
NECTIN1-201ENST00000264025 NDUFAF8A1L188 74 aa10.5□□□□□ -0.73
NECTIN1-201ENST00000264025 KRTAP21-3Q3LHN1 58 aa10.47□□□□□ -0.73
NECTIN1-201ENST00000264025 KALRNO60229 2985 aa10.45□□□□□ -0.74
NECTIN1-201ENST00000264025 SZT2Q5T011 3432 aa10.43□□□□□ -0.74
NECTIN1-201ENST00000264025 KMT2BQ9UMN6 2715 aaPredicted RBP10.43□□□□□ -0.74
NECTIN1-201ENST00000264025 ATMQ13315 3056 aa10.42□□□□□ -0.74
NECTIN1-201ENST00000264025 FLNCQ14315 2725 aa10.4□□□□□ -0.74
NECTIN1-201ENST00000264025 C10orf95Q9H7T3 257 aa10.4□□□□□ -0.74
NECTIN1-201ENST00000264025 FREM2Q5SZK8 3169 aa10.39□□□□□ -0.75
NECTIN1-201ENST00000264025 LAMA1P25391 3075 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms