RNA–Protein interactions for RNA: ENST00000264012.8

CDH3-201, Transcript of cadherin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH3, Length 4,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-201ENST00000264012 IGLV8-61A0A075B6I0 122 aa8.84□□□□□ -0.99
CDH3-201ENST00000264012 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.82□□□□□ -1
CDH3-201ENST00000264012 DNAH14Q0VDD8 3507 aa8.82□□□□□ -1
CDH3-201ENST00000264012 C9orf92A6NGG3 77 aa8.81□□□□□ -1
CDH3-201ENST00000264012 VCANP13611 3396 aa8.81□□□□□ -1
CDH3-201ENST00000264012 Q8NDZ9 215 aa8.81□□□□□ -1
CDH3-201ENST00000264012 OCR1Q9BZK8 76 aa8.8□□□□□ -1
CDH3-201ENST00000264012 ATMQ13315 3056 aa8.8□□□□□ -1
CDH3-201ENST00000264012 BAHCC1Q9P281 2608 aa8.79□□□□□ -1
CDH3-201ENST00000264012 SPANXA2-OT1Q8N9U9 137 aa8.79□□□□□ -1
CDH3-201ENST00000264012 FRYLO94915 3013 aa8.78□□□□□ -1
CDH3-201ENST00000264012 ITPR1Q14643 2758 aa8.77□□□□□ -1
CDH3-201ENST00000264012 CD164Q04900 197 aa8.76□□□□□ -1.01
CDH3-201ENST00000264012 SPINT4Q6UDR6 99 aa8.76□□□□□ -1.01
CDH3-201ENST00000264012 TACC2O95359 2948 aa8.74□□□□□ -1.01
CDH3-201ENST00000264012 COL12A1Q99715 3063 aa8.73□□□□□ -1.01
CDH3-201ENST00000264012 NBEAQ8NFP9 2946 aa8.72□□□□□ -1.01
CDH3-201ENST00000264012 NSD1Q96L73 2696 aaPredicted RBP8.72□□□□□ -1.01
CDH3-201ENST00000264012 SPRR1AP35321 89 aa8.72□□□□□ -1.01
CDH3-201ENST00000264012 Q1T7F1 81 aa8.72□□□□□ -1.01
CDH3-201ENST00000264012 FREM2Q5SZK8 3169 aa8.71□□□□□ -1.02
CDH3-201ENST00000264012 BOD1L1Q8NFC6 3051 aa8.71□□□□□ -1.02
CDH3-201ENST00000264012 Q5XG85 94 aa8.7□□□□□ -1.02
CDH3-201ENST00000264012 ADGRG4Q8IZF6 3080 aa8.7□□□□□ -1.02
CDH3-201ENST00000264012 KALRNO60229 2985 aa8.7□□□□□ -1.02
CDH3-201ENST00000264012 KTN1-AS1Q86SY8 53 aa8.69□□□□□ -1.02
CDH3-201ENST00000264012 KRTAP1-5Q9BYS1 174 aa8.69□□□□□ -1.02
CDH3-201ENST00000264012 UQCR11O14957 56 aa8.69□□□□□ -1.02
CDH3-201ENST00000264012 KRTAP26-1Q6PEX3 210 aa8.68□□□□□ -1.02
CDH3-201ENST00000264012 CYSTM1Q9H1C7 97 aa8.68□□□□□ -1.02
CDH3-201ENST00000264012 PLAC8Q9NZF1 115 aa8.67□□□□□ -1.02
CDH3-201ENST00000264012 ITPR2Q14571 2701 aa8.67□□□□□ -1.02
CDH3-201ENST00000264012 DMXL2Q8TDJ6 3036 aa8.66□□□□□ -1.02
CDH3-201ENST00000264012 RBM12B-AS1Q9P1G2 102 aa8.66□□□□□ -1.02
CDH3-201ENST00000264012 PRR26Q8N8Z3 221 aa8.63□□□□□ -1.03
CDH3-201ENST00000264012 CDC42SE1Q9NRR8 79 aa8.62□□□□□ -1.03
CDH3-201ENST00000264012 USP34Q70CQ2 3546 aa8.61□□□□□ -1.03
CDH3-201ENST00000264012 FP248Q71RG6 208 aaPredicted RBP8.61□□□□□ -1.03
CDH3-201ENST00000264012 Q8N1X5 172 aa8.61□□□□□ -1.03
CDH3-201ENST00000264012 COL6A3P12111 3177 aa8.61□□□□□ -1.03
CDH3-201ENST00000264012 FAM229BQ4G0N7 80 aa8.61□□□□□ -1.03
CDH3-201ENST00000264012 SPEGQ15772 3267 aa8.6□□□□□ -1.03
CDH3-201ENST00000264012 STAB2Q8WWQ8 2551 aa8.6□□□□□ -1.03
CDH3-201ENST00000264012 LCA10Q71F78 164 aa8.59□□□□□ -1.03
CDH3-201ENST00000264012 SPRR1BP22528 89 aa8.58□□□□□ -1.04
CDH3-201ENST00000264012 MIR22HGQ0VDD5 57 aa8.58□□□□□ -1.04
CDH3-201ENST00000264012 FLG2Q5D862 2391 aaPredicted RBP8.58□□□□□ -1.04
CDH3-201ENST00000264012 LRBAP50851 2863 aa8.57□□□□□ -1.04
CDH3-201ENST00000264012 CRIPTQ9P021 101 aa8.55□□□□□ -1.04
CDH3-201ENST00000264012 MMP24-AS1A0A0U1RRL7 71 aa8.55□□□□□ -1.04
CDH3-201ENST00000264012 UTP20O75691 2785 aaKnown RBP8.55□□□□□ -1.04
CDH3-201ENST00000264012 IGLV7-46A0A075B6I9 117 aa8.54□□□□□ -1.04
CDH3-201ENST00000264012 REV3LO60673 3130 aa8.53□□□□□ -1.04
CDH3-201ENST00000264012 ZZEF1O43149 2961 aa8.52□□□□□ -1.04
CDH3-201ENST00000264012 OXTP01178 125 aa8.52□□□□□ -1.05
CDH3-201ENST00000264012 HIVEP1P15822 2718 aa8.51□□□□□ -1.05
CDH3-201ENST00000264012 LINC00472Q9H8W2 130 aa8.51□□□□□ -1.05
CDH3-201ENST00000264012 Q6ZSA8 131 aa8.51□□□□□ -1.05
CDH3-201ENST00000264012 Q75L30 129 aa8.5□□□□□ -1.05
CDH3-201ENST00000264012 MYO15AQ9UKN7 3530 aa8.5□□□□□ -1.05
CDH3-201ENST00000264012 Q8N9P0 234 aaPredicted RBP8.48□□□□□ -1.05
CDH3-201ENST00000264012 HRES1P13985 223 aa8.48□□□□□ -1.05
CDH3-201ENST00000264012 TNRC18O15417 2968 aaPredicted RBP8.46□□□□□ -1.06
CDH3-201ENST00000264012 ASH1LQ9NR48 2969 aaKnown RBP8.46□□□□□ -1.06
CDH3-201ENST00000264012 KRTAP10-2P60368 255 aa8.44□□□□□ -1.06
CDH3-201ENST00000264012 APCP25054 2843 aa8.44□□□□□ -1.06
CDH3-201ENST00000264012 M0R2T5 61 aa8.44□□□□□ -1.06
CDH3-201ENST00000264012 KRTAP10-1P60331 282 aa8.44□□□□□ -1.06
CDH3-201ENST00000264012 LINC01558Q9Y6Z2 57 aa8.44□□□□□ -1.06
CDH3-201ENST00000264012 EYSQ5T1H1 3165 aa8.44□□□□□ -1.06
CDH3-201ENST00000264012 KRTAP4-16G5E9R7 235 aaPredicted RBP8.43□□□□□ -1.06
CDH3-201ENST00000264012 NIPBLQ6KC79 2804 aaeCLIP8.43□□□□□ -1.06
CDH3-201ENST00000264012 LINC01554Q52M75 96 aa8.43□□□□□ -1.06
CDH3-201ENST00000264012 PANO1I0J062 215 aa8.42□□□□□ -1.06
CDH3-201ENST00000264012 ZANQ9Y493 2812 aa8.42□□□□□ -1.06
CDH3-201ENST00000264012 ZCCHC13Q8WW36 166 aaKnown RBP8.41□□□□□ -1.06
CDH3-201ENST00000264012 CFAP47Q6ZTR5 3102 aa8.39□□□□□ -1.07
CDH3-201ENST00000264012 KMT2BQ9UMN6 2715 aaPredicted RBP8.39□□□□□ -1.07
CDH3-201ENST00000264012 DMXL1Q9Y485 3027 aa8.39□□□□□ -1.07
CDH3-201ENST00000264012 A0A0D9SG42 100 aa8.39□□□□□ -1.07
CDH3-201ENST00000264012 LCE6AA0A183 80 aa8.39□□□□□ -1.07
CDH3-201ENST00000264012 Q6ZR54 194 aa8.39□□□□□ -1.07
CDH3-201ENST00000264012 Q5VV11 94 aa8.38□□□□□ -1.07
CDH3-201ENST00000264012 CELSR2Q9HCU4 2923 aa8.38□□□□□ -1.07
CDH3-201ENST00000264012 SPTBN5Q9NRC6 3674 aaKnown RBP8.37□□□□□ -1.07
CDH3-201ENST00000264012 Q5W150 140 aa8.36□□□□□ -1.07
CDH3-201ENST00000264012 LINC00483Q53H64 154 aa8.36□□□□□ -1.07
CDH3-201ENST00000264012 TENM4Q6N022 2769 aa8.34□□□□□ -1.08
CDH3-201ENST00000264012 LUZP6Q538Z0 58 aa8.3□□□□□ -1.08
CDH3-201ENST00000264012 DMBT1Q9UGM3 2413 aaPredicted RBP8.29□□□□□ -1.08
CDH3-201ENST00000264012 Q5VSD8 79 aa8.29□□□□□ -1.08
CDH3-201ENST00000264012 A0A1B0GU33 70 aa8.28□□□□□ -1.08
CDH3-201ENST00000264012 DCHS2Q6V1P9 2916 aa8.28□□□□□ -1.08
CDH3-201ENST00000264012 SPINK7P58062 85 aa8.28□□□□□ -1.08
CDH3-201ENST00000264012 Q6ZRN7 208 aaPredicted RBP8.26□□□□□ -1.09
CDH3-201ENST00000264012 CRYBG3Q68DQ2 2970 aa8.24□□□□□ -1.09
CDH3-201ENST00000264012 SEC61BP60468 96 aaKnown RBP8.24□□□□□ -1.09
CDH3-201ENST00000264012 CAMK2N1Q7Z7J9 78 aa8.24□□□□□ -1.09
CDH3-201ENST00000264012 KRTAP11-1Q8IUC1 163 aa8.24□□□□□ -1.09
CDH3-201ENST00000264012 LOC400499M0QZD8 3231 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms