RNA–Protein interactions for RNA: ENST00000262539.7

PTPN3-201, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 5 BASIC

Gene PTPN3, Length 6,832 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-201ENST00000262539 NBEAQ8NFP9 2946 aa5.36□□□□□ -1.55
PTPN3-201ENST00000262539 TRBV7-4A0A0J9YYF1 115 aa5.36□□□□□ -1.55
PTPN3-201ENST00000262539 FAM218AQ96MZ4 157 aa5.35□□□□□ -1.55
PTPN3-201ENST00000262539 ASH1LQ9NR48 2969 aaKnown RBP5.35□□□□□ -1.55
PTPN3-201ENST00000262539 C8orf87E5RJ46 101 aa5.35□□□□□ -1.55
PTPN3-201ENST00000262539 NBEAL1Q6ZS30 2694 aa5.35□□□□□ -1.55
PTPN3-201ENST00000262539 SSBP3-AS1Q7Z2R9 100 aa5.34□□□□□ -1.56
PTPN3-201ENST00000262539 IGLV5-48A0A075B6I7 105 aa5.33□□□□□ -1.56
PTPN3-201ENST00000262539 LINC00846Q9NV44 126 aa5.33□□□□□ -1.56
PTPN3-201ENST00000262539 COL6A3P12111 3177 aa5.33□□□□□ -1.56
PTPN3-201ENST00000262539 DMDP11532 3685 aa5.33□□□□□ -1.56
PTPN3-201ENST00000262539 SPRR1BP22528 89 aa5.33□□□□□ -1.56
PTPN3-201ENST00000262539 Q6ZQT0 140 aa5.32□□□□□ -1.56
PTPN3-201ENST00000262539 PDZD2O15018 2839 aa5.32□□□□□ -1.56
PTPN3-201ENST00000262539 MXRA5Q9NR99 2828 aa5.32□□□□□ -1.56
PTPN3-201ENST00000262539 FREM2Q5SZK8 3169 aa5.31□□□□□ -1.56
PTPN3-201ENST00000262539 TACC2O95359 2948 aa5.31□□□□□ -1.56
PTPN3-201ENST00000262539 A0A087WTM6 91 aa5.3□□□□□ -1.56
PTPN3-201ENST00000262539 C9orf129Q5T035 196 aaKnown RBP5.3□□□□□ -1.56
PTPN3-201ENST00000262539 MRPL34Q9BQ48 92 aaKnown RBP5.29□□□□□ -1.56
PTPN3-201ENST00000262539 FBN2P35556 2912 aa5.28□□□□□ -1.56
PTPN3-201ENST00000262539 CRIPTQ9P021 101 aa5.28□□□□□ -1.56
PTPN3-201ENST00000262539 TENM4Q6N022 2769 aa5.28□□□□□ -1.56
PTPN3-201ENST00000262539 LOC101927531A0A1B0GV80 90 aa5.28□□□□□ -1.56
PTPN3-201ENST00000262539 K7EQZ3 153 aa5.28□□□□□ -1.56
PTPN3-201ENST00000262539 ZNF861PO60384 105 aa5.27□□□□□ -1.57
PTPN3-201ENST00000262539 ERC2-IT1O76042 136 aa5.27□□□□□ -1.57
PTPN3-201ENST00000262539 Q6ZSA8 131 aa5.27□□□□□ -1.57
PTPN3-201ENST00000262539 A8MWP4 228 aa5.27□□□□□ -1.57
PTPN3-201ENST00000262539 ANAPC11Q9NYG5 84 aa5.27□□□□□ -1.57
PTPN3-201ENST00000262539 Q6ZR54 194 aa5.26□□□□□ -1.57
PTPN3-201ENST00000262539 H3BPC8 53 aa5.26□□□□□ -1.57
PTPN3-201ENST00000262539 NF1P21359 2839 aa5.25□□□□□ -1.57
PTPN3-201ENST00000262539 A0A0D9SG42 100 aa5.25□□□□□ -1.57
PTPN3-201ENST00000262539 IGLV7-43P04211 117 aa5.24□□□□□ -1.57
PTPN3-201ENST00000262539 SPRR4Q96PI1 79 aa5.23□□□□□ -1.57
PTPN3-201ENST00000262539 NBEAL2Q6ZNJ1 2754 aa5.22□□□□□ -1.57
PTPN3-201ENST00000262539 PLAC8Q9NZF1 115 aa5.22□□□□□ -1.57
PTPN3-201ENST00000262539 CD164Q04900 197 aa5.22□□□□□ -1.57
PTPN3-201ENST00000262539 KRTAP4-16G5E9R7 235 aaPredicted RBP5.21□□□□□ -1.57
PTPN3-201ENST00000262539 LRBAP50851 2863 aa5.21□□□□□ -1.57
PTPN3-201ENST00000262539 Q8N377 158 aa5.21□□□□□ -1.58
PTPN3-201ENST00000262539 IGLV7-46A0A075B6I9 117 aa5.2□□□□□ -1.58
PTPN3-201ENST00000262539 C8orf17Q9NRJ1 99 aa5.2□□□□□ -1.58
PTPN3-201ENST00000262539 FAM229BQ4G0N7 80 aa5.2□□□□□ -1.58
PTPN3-201ENST00000262539 OTOGQ6ZRI0 2925 aa5.19□□□□□ -1.58
PTPN3-201ENST00000262539 CELSR2Q9HCU4 2923 aa5.19□□□□□ -1.58
PTPN3-201ENST00000262539 IGFL1Q6UW32 110 aa5.19□□□□□ -1.58
PTPN3-201ENST00000262539 PSORS1C2Q9UIG4 136 aa5.19□□□□□ -1.58
PTPN3-201ENST00000262539 A0A1B0GVX0 72 aa5.19□□□□□ -1.58
PTPN3-201ENST00000262539 TNP2Q05952 138 aa5.19□□□□□ -1.58
PTPN3-201ENST00000262539 CASC10Q5T4H9 136 aa5.18□□□□□ -1.58
PTPN3-201ENST00000262539 COA5Q86WW8 74 aa5.18□□□□□ -1.58
PTPN3-201ENST00000262539 Q6ZRN7 208 aaPredicted RBP5.18□□□□□ -1.58
PTPN3-201ENST00000262539 Q8N1X5 172 aa5.17□□□□□ -1.58
PTPN3-201ENST00000262539 CAMK2N1Q7Z7J9 78 aa5.17□□□□□ -1.58
PTPN3-201ENST00000262539 KRTAP1-5Q9BYS1 174 aa5.17□□□□□ -1.58
PTPN3-201ENST00000262539 A0A0G2JQZ4 141 aa5.16□□□□□ -1.58
PTPN3-201ENST00000262539 A0A1W2PNN7 141 aa5.16□□□□□ -1.58
PTPN3-201ENST00000262539 UQCR11O14957 56 aa5.16□□□□□ -1.58
PTPN3-201ENST00000262539 Q8NDZ9 215 aa5.16□□□□□ -1.58
PTPN3-201ENST00000262539 MIR22HGQ0VDD5 57 aa5.15□□□□□ -1.58
PTPN3-201ENST00000262539 RPS28P62857 69 aaKnown RBP5.14□□□□□ -1.59
PTPN3-201ENST00000262539 DCHS2Q6V1P9 2916 aa5.14□□□□□ -1.59
PTPN3-201ENST00000262539 A0A1W2PNM2 257 aa5.14□□□□□ -1.59
PTPN3-201ENST00000262539 KLKP1Q107X0 134 aa5.13□□□□□ -1.59
PTPN3-201ENST00000262539 LINC00483Q53H64 154 aa5.13□□□□□ -1.59
PTPN3-201ENST00000262539 PRR26Q8N8Z3 221 aa5.13□□□□□ -1.59
PTPN3-201ENST00000262539 TENM1Q9UKZ4 2725 aa5.12□□□□□ -1.59
PTPN3-201ENST00000262539 PRR15Q8IV56 129 aa5.12□□□□□ -1.59
PTPN3-201ENST00000262539 CDC42SE1Q9NRR8 79 aa5.11□□□□□ -1.59
PTPN3-201ENST00000262539 LOC400499M0QZD8 3231 aa5.11□□□□□ -1.59
PTPN3-201ENST00000262539 ASPMQ8IZT6 3477 aa5.11□□□□□ -1.59
PTPN3-201ENST00000262539 LCE6AA0A183 80 aa5.09□□□□□ -1.6
PTPN3-201ENST00000262539 CELSR3Q9NYQ7 3312 aa5.08□□□□□ -1.6
PTPN3-201ENST00000262539 HRES1P13985 223 aa5.08□□□□□ -1.6
PTPN3-201ENST00000262539 C4orf26Q17RF5 130 aa5.08□□□□□ -1.6
PTPN3-201ENST00000262539 TENM3Q9P273 2699 aa5.07□□□□□ -1.6
PTPN3-201ENST00000262539 LUZP6Q538Z0 58 aa5.07□□□□□ -1.6
PTPN3-201ENST00000262539 Q5VSD8 79 aa5.06□□□□□ -1.6
PTPN3-201ENST00000262539 KRTAP13-1Q8IUC0 172 aa5.06□□□□□ -1.6
PTPN3-201ENST00000262539 CFAP47Q6ZTR5 3102 aa5.06□□□□□ -1.6
PTPN3-201ENST00000262539 ASB16-AS1Q495Z4 193 aa5.06□□□□□ -1.6
PTPN3-201ENST00000262539 Q5XG85 94 aa5.05□□□□□ -1.6
PTPN3-201ENST00000262539 A8MUN3 132 aa5.05□□□□□ -1.6
PTPN3-201ENST00000262539 S4R3F8 94 aa5.05□□□□□ -1.6
PTPN3-201ENST00000262539 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.05□□□□□ -1.6
PTPN3-201ENST00000262539 PRO0628Q9UI54 55 aa5.04□□□□□ -1.6
PTPN3-201ENST00000262539 SPENQ96T58 3664 aaKnown RBP5.04□□□□□ -1.6
PTPN3-201ENST00000262539 RPS29P62273 56 aaKnown RBP5.03□□□□□ -1.6
PTPN3-201ENST00000262539 SEC61BP60468 96 aaKnown RBP5.02□□□□□ -1.61
PTPN3-201ENST00000262539 ZFHX4Q86UP3 3567 aa5.02□□□□□ -1.61
PTPN3-201ENST00000262539 LINC00472Q9H8W2 130 aa5.01□□□□□ -1.61
PTPN3-201ENST00000262539 CYP4F30PQ9H0H9 118 aa5.01□□□□□ -1.61
PTPN3-201ENST00000262539 CRYBG3Q68DQ2 2970 aa5.01□□□□□ -1.61
PTPN3-201ENST00000262539 KRTAP7-1Q8IUC3 87 aa5.01□□□□□ -1.61
PTPN3-201ENST00000262539 VWFP04275 2813 aa5□□□□□ -1.61
PTPN3-201ENST00000262539 OCR1Q9BZK8 76 aa5□□□□□ -1.61
PTPN3-201ENST00000262539 SPANXA2-OT1Q8N9U9 137 aa5□□□□□ -1.61
PTPN3-201ENST00000262539 CSAG1Q6PB30 78 aa4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms