RNA–Protein interactions for RNA: ENST00000262213.6

TRAM1-201, Transcript of translocation associated membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAM1, Length 2,785 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1-201ENST00000262213 NBEAL1Q6ZS30 2694 aa11.03□□□□□ -0.64
TRAM1-201ENST00000262213 SRRM2Q9UQ35 2752 aaKnown RBP11.03□□□□□ -0.64
TRAM1-201ENST00000262213 A0A096LNI7 61 aa11.01□□□□□ -0.65
TRAM1-201ENST00000262213 KRTAP24-1Q3LI83 254 aa11□□□□□ -0.65
TRAM1-201ENST00000262213 PSPHP1O15172 72 aa10.99□□□□□ -0.65
TRAM1-201ENST00000262213 UBE2AP49459 152 aa10.98□□□□□ -0.65
TRAM1-201ENST00000262213 LINC00208Q96KT6 92 aa10.97□□□□□ -0.65
TRAM1-201ENST00000262213 MP68P56378 58 aa10.94□□□□□ -0.66
TRAM1-201ENST00000262213 CHTF8P0CG12 524 aa10.94□□□□□ -0.66
TRAM1-201ENST00000262213 C1orf195Q5TG92 126 aa10.92□□□□□ -0.66
TRAM1-201ENST00000262213 CMYA5Q8N3K9 4069 aa10.92□□□□□ -0.66
TRAM1-201ENST00000262213 PHF5AQ7RTV0 110 aaKnown RBP10.92□□□□□ -0.66
TRAM1-201ENST00000262213 KRTAP11-1Q8IUC1 163 aa10.92□□□□□ -0.66
TRAM1-201ENST00000262213 KRTAP1-5Q9BYS1 174 aa10.91□□□□□ -0.66
TRAM1-201ENST00000262213 C16orf90A8MZG2 172 aa10.89□□□□□ -0.67
TRAM1-201ENST00000262213 DNAH10Q8IVF4 4471 aa10.89□□□□□ -0.67
TRAM1-201ENST00000262213 CSMD3Q7Z407 3707 aa10.89□□□□□ -0.67
TRAM1-201ENST00000262213 Q1T7F1 81 aa10.89□□□□□ -0.67
TRAM1-201ENST00000262213 CASC2Q6XLA1 102 aa10.89□□□□□ -0.67
TRAM1-201ENST00000262213 DNAH1Q9P2D7 4330 aa10.89□□□□□ -0.67
TRAM1-201ENST00000262213 TRAV22A0A0B4J277 110 aa10.88□□□□□ -0.67
TRAM1-201ENST00000262213 H0Y9P7 68 aa10.88□□□□□ -0.67
TRAM1-201ENST00000262213 CYP4F30PQ9H0H9 118 aa10.87□□□□□ -0.67
TRAM1-201ENST00000262213 NDUFB1O75438 58 aa10.87□□□□□ -0.67
TRAM1-201ENST00000262213 IGLV8-61A0A075B6I0 122 aa10.85□□□□□ -0.67
TRAM1-201ENST00000262213 KRTAP29-1A8MX34 341 aaPredicted RBP10.85□□□□□ -0.67
TRAM1-201ENST00000262213 CNBPP62633 177 aaKnown RBP10.85□□□□□ -0.67
TRAM1-201ENST00000262213 LYSTQ99698 3801 aa10.84□□□□□ -0.67
TRAM1-201ENST00000262213 B9D2Q9BPU9 175 aa10.84□□□□□ -0.67
TRAM1-201ENST00000262213 A8MUN3 132 aa10.84□□□□□ -0.67
TRAM1-201ENST00000262213 H0Y9J4 135 aa10.83□□□□□ -0.68
TRAM1-201ENST00000262213 STAB2Q8WWQ8 2551 aa10.83□□□□□ -0.68
TRAM1-201ENST00000262213 PRR15Q8IV56 129 aa10.83□□□□□ -0.68
TRAM1-201ENST00000262213 UBE2DNLQ8IWF7 75 aa10.81□□□□□ -0.68
TRAM1-201ENST00000262213 DNAH3Q8TD57 4116 aa10.8□□□□□ -0.68
TRAM1-201ENST00000262213 TENM2Q9NT68 2774 aa10.8□□□□□ -0.68
TRAM1-201ENST00000262213 MGAM2Q2M2H8 2515 aa10.79□□□□□ -0.68
TRAM1-201ENST00000262213 A8MWP4 228 aa10.78□□□□□ -0.68
TRAM1-201ENST00000262213 K7EIL1 84 aa10.78□□□□□ -0.68
TRAM1-201ENST00000262213 LINC00472Q9H8W2 130 aa10.77□□□□□ -0.68
TRAM1-201ENST00000262213 HUWE1Q7Z6Z7 4374 aaKnown RBP10.76□□□□□ -0.69
TRAM1-201ENST00000262213 A8MU10 97 aa10.76□□□□□ -0.69
TRAM1-201ENST00000262213 V9GYY9 64 aa10.75□□□□□ -0.69
TRAM1-201ENST00000262213 COL7A1Q02388 2944 aa10.74□□□□□ -0.69
TRAM1-201ENST00000262213 IGLV9-49A0A0B4J1Y8 123 aa10.73□□□□□ -0.69
TRAM1-201ENST00000262213 DNAH9Q9NYC9 4486 aa10.71□□□□□ -0.69
TRAM1-201ENST00000262213 PCOTHQ58A44 107 aa10.71□□□□□ -0.69
TRAM1-201ENST00000262213 PANO1I0J062 215 aa10.71□□□□□ -0.69
TRAM1-201ENST00000262213 SPRR1BP22528 89 aa10.71□□□□□ -0.69
TRAM1-201ENST00000262213 MMP24-AS1A0A0U1RRL7 71 aa10.7□□□□□ -0.7
TRAM1-201ENST00000262213 Q5VV11 94 aa10.7□□□□□ -0.7
TRAM1-201ENST00000262213 SPANXA2-OT1Q8N9U9 137 aa10.69□□□□□ -0.7
TRAM1-201ENST00000262213 PRR15LQ9BU68 103 aa10.69□□□□□ -0.7
TRAM1-201ENST00000262213 CHKB-CPT1BH3BT56 60 aa10.68□□□□□ -0.7
TRAM1-201ENST00000262213 H3BPC8 53 aa10.67□□□□□ -0.7
TRAM1-201ENST00000262213 Q8N9P0 234 aaPredicted RBP10.67□□□□□ -0.7
TRAM1-201ENST00000262213 C9orf163Q8N9P6 203 aa10.66□□□□□ -0.7
TRAM1-201ENST00000262213 C14orf177Q52M58 125 aa10.66□□□□□ -0.7
TRAM1-201ENST00000262213 NDUFS5O43920 106 aa10.64□□□□□ -0.71
TRAM1-201ENST00000262213 COA5Q86WW8 74 aa10.63□□□□□ -0.71
TRAM1-201ENST00000262213 PMAIP1Q13794 54 aa10.62□□□□□ -0.71
TRAM1-201ENST00000262213 APLNQ9ULZ1 77 aa10.61□□□□□ -0.71
TRAM1-201ENST00000262213 IGHV6-1A0A0B4J1U7 121 aa10.6□□□□□ -0.71
TRAM1-201ENST00000262213 LIMD2Q9BT23 127 aa10.59□□□□□ -0.71
TRAM1-201ENST00000262213 Q96NJ1 140 aa10.59□□□□□ -0.71
TRAM1-201ENST00000262213 MDFIQ99750 246 aa10.59□□□□□ -0.71
TRAM1-201ENST00000262213 CD164Q04900 197 aa10.58□□□□□ -0.72
TRAM1-201ENST00000262213 ANAPC11Q9NYG5 84 aa10.58□□□□□ -0.72
TRAM1-201ENST00000262213 DNAH7Q8WXX0 4024 aa10.58□□□□□ -0.72
TRAM1-201ENST00000262213 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.57□□□□□ -0.72
TRAM1-201ENST00000262213 SEC61GP60059 68 aa10.57□□□□□ -0.72
TRAM1-201ENST00000262213 SPTSSBQ8NFR3 76 aa10.57□□□□□ -0.72
TRAM1-201ENST00000262213 KRTAP13-1Q8IUC0 172 aa10.56□□□□□ -0.72
TRAM1-201ENST00000262213 IGLV7-46A0A075B6I9 117 aa10.56□□□□□ -0.72
TRAM1-201ENST00000262213 MOBPQ13875 183 aa10.56□□□□□ -0.72
TRAM1-201ENST00000262213 C8orf17Q9NRJ1 99 aa10.56□□□□□ -0.72
TRAM1-201ENST00000262213 A6NED7 52 aa10.54□□□□□ -0.72
TRAM1-201ENST00000262213 SPAG11AQ6PDA7 123 aa10.53□□□□□ -0.72
TRAM1-201ENST00000262213 NBDYA0A0U1RRE5 68 aa10.52□□□□□ -0.73
TRAM1-201ENST00000262213 CDK2AP2O75956 126 aa10.51□□□□□ -0.73
TRAM1-201ENST00000262213 A0A087X002 238 aa10.5□□□□□ -0.73
TRAM1-201ENST00000262213 NOTCH2NLQ7Z3S9 236 aa10.5□□□□□ -0.73
TRAM1-201ENST00000262213 TP53AIP1Q9HCN2 124 aa10.49□□□□□ -0.73
TRAM1-201ENST00000262213 A0A1B0GVX0 72 aa10.48□□□□□ -0.73
TRAM1-201ENST00000262213 LCA10Q71F78 164 aa10.48□□□□□ -0.73
TRAM1-201ENST00000262213 SPINK6Q6UWN8 80 aa10.47□□□□□ -0.73
TRAM1-201ENST00000262213 SPACA4Q8TDM5 124 aa10.47□□□□□ -0.73
TRAM1-201ENST00000262213 ASB16-AS1Q495Z4 193 aa10.46□□□□□ -0.73
TRAM1-201ENST00000262213 Q6ZRN7 208 aaPredicted RBP10.45□□□□□ -0.74
TRAM1-201ENST00000262213 Q75L30 129 aa10.45□□□□□ -0.74
TRAM1-201ENST00000262213 Q6ZR54 194 aa10.44□□□□□ -0.74
TRAM1-201ENST00000262213 WWC2-AS2Q96NR7 200 aa10.43□□□□□ -0.74
TRAM1-201ENST00000262213 MRPL34Q9BQ48 92 aaKnown RBP10.43□□□□□ -0.74
TRAM1-201ENST00000262213 PSORS1C2Q9UIG4 136 aa10.43□□□□□ -0.74
TRAM1-201ENST00000262213 LOC101927531A0A1B0GV80 90 aa10.42□□□□□ -0.74
TRAM1-201ENST00000262213 HRES1P13985 223 aa10.42□□□□□ -0.74
TRAM1-201ENST00000262213 PLECQ15149 4684 aaKnown RBP10.41□□□□□ -0.74
TRAM1-201ENST00000262213 LINC00483Q53H64 154 aa10.41□□□□□ -0.74
TRAM1-201ENST00000262213 ZNF706Q9Y5V0 76 aaPredicted RBP10.38□□□□□ -0.75
TRAM1-201ENST00000262213 LINC01558Q9Y6Z2 57 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms