RNA–Protein interactions for RNA: ENST00000261707.7

SLC6A4-201, Transcript of solute carrier family 6 member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A4, Length 6,604 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4-201ENST00000261707 WDR87Q6ZQQ6 2873 aa6.46□□□□□ -1.37
SLC6A4-201ENST00000261707 ABCA12Q86UK0 2595 aa6.46□□□□□ -1.37
SLC6A4-201ENST00000261707 ADM2Q7Z4H4 148 aa6.46□□□□□ -1.37
SLC6A4-201ENST00000261707 KRTAP1-1Q07627 177 aa6.45□□□□□ -1.38
SLC6A4-201ENST00000261707 KRTAP29-1A8MX34 341 aaPredicted RBP6.45□□□□□ -1.38
SLC6A4-201ENST00000261707 DNAH14Q0VDD8 3507 aa6.45□□□□□ -1.38
SLC6A4-201ENST00000261707 CHD7Q9P2D1 2997 aa6.44□□□□□ -1.38
SLC6A4-201ENST00000261707 C5orf42Q9H799 3197 aa6.43□□□□□ -1.38
SLC6A4-201ENST00000261707 NDUFAF8A1L188 74 aa6.43□□□□□ -1.38
SLC6A4-201ENST00000261707 M0QZ58 72 aa6.42□□□□□ -1.38
SLC6A4-201ENST00000261707 SZT2Q5T011 3432 aa6.42□□□□□ -1.38
SLC6A4-201ENST00000261707 XIRP2A4UGR9 3374 aa6.42□□□□□ -1.38
SLC6A4-201ENST00000261707 PLAC8Q9NZF1 115 aa6.42□□□□□ -1.38
SLC6A4-201ENST00000261707 VCANP13611 3396 aa6.41□□□□□ -1.38
SLC6A4-201ENST00000261707 PKD1L2Q7Z442 2459 aa6.41□□□□□ -1.38
SLC6A4-201ENST00000261707 USP9XQ93008 2570 aaPredicted RBP6.4□□□□□ -1.38
SLC6A4-201ENST00000261707 A8MU10 97 aa6.4□□□□□ -1.39
SLC6A4-201ENST00000261707 RANBP2P49792 3224 aaKnown RBP6.39□□□□□ -1.39
SLC6A4-201ENST00000261707 TLN2Q9Y4G6 2542 aa6.38□□□□□ -1.39
SLC6A4-201ENST00000261707 KRTAP10-1P60331 282 aa6.38□□□□□ -1.39
SLC6A4-201ENST00000261707 CHD8Q9HCK8 2581 aa6.38□□□□□ -1.39
SLC6A4-201ENST00000261707 ACANP16112 2415 aa6.37□□□□□ -1.39
SLC6A4-201ENST00000261707 CHD9Q3L8U1 2897 aa6.36□□□□□ -1.39
SLC6A4-201ENST00000261707 UNC80Q8N2C7 3258 aa6.35□□□□□ -1.39
SLC6A4-201ENST00000261707 SETD2Q9BYW2 2564 aaPredicted RBP6.34□□□□□ -1.39
SLC6A4-201ENST00000261707 PANO1I0J062 215 aa6.33□□□□□ -1.4
SLC6A4-201ENST00000261707 KRTAP10-2P60368 255 aa6.33□□□□□ -1.4
SLC6A4-201ENST00000261707 MYO15AQ9UKN7 3530 aa6.33□□□□□ -1.4
SLC6A4-201ENST00000261707 ANKRD17O75179 2603 aaKnown RBP6.32□□□□□ -1.4
SLC6A4-201ENST00000261707 KRTAP4-16G5E9R7 235 aaPredicted RBP6.31□□□□□ -1.4
SLC6A4-201ENST00000261707 A0A087X002 238 aa6.27□□□□□ -1.41
SLC6A4-201ENST00000261707 TRANK1O15050 2925 aa6.27□□□□□ -1.41
SLC6A4-201ENST00000261707 FASNP49327 2511 aaKnown RBP6.27□□□□□ -1.41
SLC6A4-201ENST00000261707 NOTCH2NLQ7Z3S9 236 aa6.25□□□□□ -1.41
SLC6A4-201ENST00000261707 USP9YO00507 2555 aaPredicted RBP6.25□□□□□ -1.41
SLC6A4-201ENST00000261707 C20orf166-AS1Q96NR2 134 aa6.25□□□□□ -1.41
SLC6A4-201ENST00000261707 A8MUU9 505 aa6.23□□□□□ -1.41
SLC6A4-201ENST00000261707 SPEGQ15772 3267 aa6.22□□□□□ -1.41
SLC6A4-201ENST00000261707 MTORP42345 2549 aa6.22□□□□□ -1.41
SLC6A4-201ENST00000261707 POLQO75417 2590 aa6.2□□□□□ -1.42
SLC6A4-201ENST00000261707 KRTAP1-5Q9BYS1 174 aa6.19□□□□□ -1.42
SLC6A4-201ENST00000261707 PRUNE2Q8WUY3 3088 aa6.18□□□□□ -1.42
SLC6A4-201ENST00000261707 KRTAP11-1Q8IUC1 163 aa6.16□□□□□ -1.42
SLC6A4-201ENST00000261707 SPTBN5Q9NRC6 3674 aaKnown RBP6.15□□□□□ -1.42
SLC6A4-201ENST00000261707 REV3LO60673 3130 aa6.14□□□□□ -1.43
SLC6A4-201ENST00000261707 TRIOO75962 3097 aa6.14□□□□□ -1.43
SLC6A4-201ENST00000261707 ANKRD11Q6UB99 2663 aaPredicted RBP6.14□□□□□ -1.43
SLC6A4-201ENST00000261707 A0A0C4DFX4 3053 aa6.12□□□□□ -1.43
SLC6A4-201ENST00000261707 EYSQ5T1H1 3165 aa6.11□□□□□ -1.43
SLC6A4-201ENST00000261707 CELSR3Q9NYQ7 3312 aa6.11□□□□□ -1.43
SLC6A4-201ENST00000261707 KRTAP21-3Q3LHN1 58 aa6.1□□□□□ -1.43
SLC6A4-201ENST00000261707 C10orf95Q9H7T3 257 aa6.08□□□□□ -1.44
SLC6A4-201ENST00000261707 WDFY3Q8IZQ1 3526 aa6.08□□□□□ -1.44
SLC6A4-201ENST00000261707 SPTBN4Q9H254 2564 aa6.05□□□□□ -1.44
SLC6A4-201ENST00000261707 CEP295Q9C0D2 2601 aa6.05□□□□□ -1.44
SLC6A4-201ENST00000261707 LAMA1P25391 3075 aa6.04□□□□□ -1.44
SLC6A4-201ENST00000261707 KRTAP7-1Q8IUC3 87 aa6.01□□□□□ -1.45
SLC6A4-201ENST00000261707 FLG2Q5D862 2391 aaPredicted RBP5.98□□□□□ -1.45
SLC6A4-201ENST00000261707 A0A1B0GVY2 172 aa5.98□□□□□ -1.45
SLC6A4-201ENST00000261707 KRTAP10-8P60410 259 aa5.96□□□□□ -1.45
SLC6A4-201ENST00000261707 RPS29P62273 56 aaKnown RBP5.96□□□□□ -1.45
SLC6A4-201ENST00000261707 MGAM2Q2M2H8 2515 aa5.94□□□□□ -1.46
SLC6A4-201ENST00000261707 TNP1P09430 55 aa5.94□□□□□ -1.46
SLC6A4-201ENST00000261707 P0C880 135 aa5.94□□□□□ -1.46
SLC6A4-201ENST00000261707 VPS13AQ96RL7 3174 aa5.93□□□□□ -1.46
SLC6A4-201ENST00000261707 KRTAP13-1Q8IUC0 172 aa5.92□□□□□ -1.46
SLC6A4-201ENST00000261707 USP24Q9UPU5 2620 aa5.92□□□□□ -1.46
SLC6A4-201ENST00000261707 KRTAP10-10P60014 251 aa5.91□□□□□ -1.46
SLC6A4-201ENST00000261707 HECTD1Q9ULT8 2610 aa5.91□□□□□ -1.46
SLC6A4-201ENST00000261707 H0YAA0 97 aa5.91□□□□□ -1.46
SLC6A4-201ENST00000261707 PRRC2CQ9Y520 2896 aaKnown RBP5.89□□□□□ -1.47
SLC6A4-201ENST00000261707 KRTAP13-2Q52LG2 175 aa5.89□□□□□ -1.47
SLC6A4-201ENST00000261707 PP632Q6XCG6 107 aa5.89□□□□□ -1.47
SLC6A4-201ENST00000261707 PRO2289Q9P1D8 64 aa5.89□□□□□ -1.47
SLC6A4-201ENST00000261707 COL6A3P12111 3177 aa5.88□□□□□ -1.47
SLC6A4-201ENST00000261707 FREM2Q5SZK8 3169 aa5.87□□□□□ -1.47
SLC6A4-201ENST00000261707 FRYLO94915 3013 aa5.87□□□□□ -1.47
SLC6A4-201ENST00000261707 TNRC18O15417 2968 aaPredicted RBP5.86□□□□□ -1.47
SLC6A4-201ENST00000261707 FLNBO75369 2602 aaKnown RBP5.85□□□□□ -1.47
SLC6A4-201ENST00000261707 WDFY4Q6ZS81 3184 aa5.85□□□□□ -1.47
SLC6A4-201ENST00000261707 CFAP54Q96N23 3096 aa5.84□□□□□ -1.47
SLC6A4-201ENST00000261707 DMBT1Q9UGM3 2413 aaPredicted RBP5.82□□□□□ -1.48
SLC6A4-201ENST00000261707 ASPMQ8IZT6 3477 aa5.82□□□□□ -1.48
SLC6A4-201ENST00000261707 Q6ZRN7 208 aaPredicted RBP5.82□□□□□ -1.48
SLC6A4-201ENST00000261707 EPG5Q9HCE0 2579 aa5.8□□□□□ -1.48
SLC6A4-201ENST00000261707 DMDP11532 3685 aa5.78□□□□□ -1.48
SLC6A4-201ENST00000261707 DCHS1Q96JQ0 3298 aa5.78□□□□□ -1.48
SLC6A4-201ENST00000261707 MUC3AQ02505 3323 aa5.75□□□□□ -1.49
SLC6A4-201ENST00000261707 FLNAP21333 2647 aaKnown RBP5.72□□□□□ -1.49
SLC6A4-201ENST00000261707 HELZ2Q9BYK8 2649 aaKnown RBP5.72□□□□□ -1.49
SLC6A4-201ENST00000261707 ZFHX4Q86UP3 3567 aa5.7□□□□□ -1.5
SLC6A4-201ENST00000261707 MGAQ8IWI9 3026 aa5.68□□□□□ -1.5
SLC6A4-201ENST00000261707 NBEAL1Q6ZS30 2694 aa5.67□□□□□ -1.5
SLC6A4-201ENST00000261707 CFAP46Q8IYW2 2715 aa5.67□□□□□ -1.5
SLC6A4-201ENST00000261707 FRYQ5TBA9 3013 aa5.67□□□□□ -1.5
SLC6A4-201ENST00000261707 DSPP15924 2871 aaKnown RBP5.66□□□□□ -1.5
SLC6A4-201ENST00000261707 CENPEQ02224 2701 aa5.66□□□□□ -1.5
SLC6A4-201ENST00000261707 STAB1Q9NY15 2570 aa5.65□□□□□ -1.5
SLC6A4-201ENST00000261707 ZNF292O60281 2723 aa5.65□□□□□ -1.5
SLC6A4-201ENST00000261707 ITPR3Q14573 2671 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms