RNA–Protein interactions for RNA: ENST00000261037.7

COL8A1-201, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL8A1, Length 5,705 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-201ENST00000261037 ATRQ13535 2644 aa7.39□□□□□ -1.23
COL8A1-201ENST00000261037 CENPEQ02224 2701 aa7.38□□□□□ -1.23
COL8A1-201ENST00000261037 A0A0C4DFX4 3053 aa7.37□□□□□ -1.23
COL8A1-201ENST00000261037 Q75L30 129 aa7.36□□□□□ -1.23
COL8A1-201ENST00000261037 Q5W150 140 aa7.36□□□□□ -1.23
COL8A1-201ENST00000261037 LINC00483Q53H64 154 aa7.36□□□□□ -1.23
COL8A1-201ENST00000261037 UNC80Q8N2C7 3258 aa7.36□□□□□ -1.23
COL8A1-201ENST00000261037 AKAP13Q12802 2813 aa7.35□□□□□ -1.23
COL8A1-201ENST00000261037 KRTAP1-5Q9BYS1 174 aa7.35□□□□□ -1.23
COL8A1-201ENST00000261037 CYSTM1Q9H1C7 97 aa7.34□□□□□ -1.23
COL8A1-201ENST00000261037 MAST4O15021 2626 aa7.34□□□□□ -1.23
COL8A1-201ENST00000261037 LAMA2P24043 3122 aaKnown RBP7.33□□□□□ -1.24
COL8A1-201ENST00000261037 CSAG1Q6PB30 78 aa7.33□□□□□ -1.24
COL8A1-201ENST00000261037 SPRR1AP35321 89 aa7.33□□□□□ -1.24
COL8A1-201ENST00000261037 PRAC1Q96KF2 57 aa7.33□□□□□ -1.24
COL8A1-201ENST00000261037 Q5VSD8 79 aa7.32□□□□□ -1.24
COL8A1-201ENST00000261037 LINC01558Q9Y6Z2 57 aa7.3□□□□□ -1.24
COL8A1-201ENST00000261037 SPINK7P58062 85 aa7.3□□□□□ -1.24
COL8A1-201ENST00000261037 CFAP54Q96N23 3096 aa7.29□□□□□ -1.24
COL8A1-201ENST00000261037 DMAC1Q96GE9 116 aa7.29□□□□□ -1.24
COL8A1-201ENST00000261037 WDFY4Q6ZS81 3184 aa7.29□□□□□ -1.24
COL8A1-201ENST00000261037 LINC00472Q9H8W2 130 aa7.29□□□□□ -1.24
COL8A1-201ENST00000261037 KRTAP10-1P60331 282 aa7.28□□□□□ -1.24
COL8A1-201ENST00000261037 KRTAP10-2P60368 255 aa7.28□□□□□ -1.24
COL8A1-201ENST00000261037 Q5XG85 94 aa7.28□□□□□ -1.24
COL8A1-201ENST00000261037 CDH23Q9H251 3354 aa7.27□□□□□ -1.25
COL8A1-201ENST00000261037 XIRP2A4UGR9 3374 aa7.27□□□□□ -1.25
COL8A1-201ENST00000261037 H3BS24 57 aa7.26□□□□□ -1.25
COL8A1-201ENST00000261037 R4GN34 69 aa7.24□□□□□ -1.25
COL8A1-201ENST00000261037 KRTAP26-1Q6PEX3 210 aa7.24□□□□□ -1.25
COL8A1-201ENST00000261037 FP248Q71RG6 208 aaPredicted RBP7.24□□□□□ -1.25
COL8A1-201ENST00000261037 Q5VV11 94 aa7.24□□□□□ -1.25
COL8A1-201ENST00000261037 DSPP15924 2871 aaKnown RBP7.24□□□□□ -1.25
COL8A1-201ENST00000261037 SPRR1BP22528 89 aa7.23□□□□□ -1.25
COL8A1-201ENST00000261037 IGSF10Q6WRI0 2623 aa7.23□□□□□ -1.25
COL8A1-201ENST00000261037 TRIOO75962 3097 aa7.22□□□□□ -1.25
COL8A1-201ENST00000261037 SEC61BP60468 96 aaKnown RBP7.19□□□□□ -1.26
COL8A1-201ENST00000261037 PANO1I0J062 215 aa7.18□□□□□ -1.26
COL8A1-201ENST00000261037 LCE6AA0A183 80 aa7.17□□□□□ -1.26
COL8A1-201ENST00000261037 M0QZ58 72 aa7.16□□□□□ -1.26
COL8A1-201ENST00000261037 UNC79Q9P2D8 2635 aa7.15□□□□□ -1.26
COL8A1-201ENST00000261037 TEP1Q99973 2627 aaKnown RBP7.15□□□□□ -1.26
COL8A1-201ENST00000261037 VPS13AQ96RL7 3174 aa7.14□□□□□ -1.27
COL8A1-201ENST00000261037 SZT2Q5T011 3432 aa7.14□□□□□ -1.27
COL8A1-201ENST00000261037 TEX15Q9BXT5 2789 aa7.13□□□□□ -1.27
COL8A1-201ENST00000261037 A0A0A0MQY5 61 aa7.12□□□□□ -1.27
COL8A1-201ENST00000261037 H1FX-AS1Q4G0G2 97 aa7.12□□□□□ -1.27
COL8A1-201ENST00000261037 SPATA8Q6RVD6 105 aa7.12□□□□□ -1.27
COL8A1-201ENST00000261037 ADM2Q7Z4H4 148 aa7.11□□□□□ -1.27
COL8A1-201ENST00000261037 Q6ZR54 194 aa7.11□□□□□ -1.27
COL8A1-201ENST00000261037 ROMO1P60602 79 aa7.1□□□□□ -1.27
COL8A1-201ENST00000261037 RPL37P61927 97 aaKnown RBP7.1□□□□□ -1.27
COL8A1-201ENST00000261037 CHD6Q8TD26 2715 aa7.1□□□□□ -1.27
COL8A1-201ENST00000261037 OXTP01178 125 aa7.09□□□□□ -1.27
COL8A1-201ENST00000261037 A0A087X002 238 aa7.08□□□□□ -1.28
COL8A1-201ENST00000261037 COL6A5A8TX70 2615 aa7.06□□□□□ -1.28
COL8A1-201ENST00000261037 BAHCC1Q9P281 2608 aa7.05□□□□□ -1.28
COL8A1-201ENST00000261037 KRTAP4-16G5E9R7 235 aaPredicted RBP7.04□□□□□ -1.28
COL8A1-201ENST00000261037 LAMA1P25391 3075 aa7.03□□□□□ -1.28
COL8A1-201ENST00000261037 NOTCH2NLQ7Z3S9 236 aa7.03□□□□□ -1.28
COL8A1-201ENST00000261037 PLAC4Q8WY50 150 aa7.02□□□□□ -1.29
COL8A1-201ENST00000261037 FRYQ5TBA9 3013 aa7.01□□□□□ -1.29
COL8A1-201ENST00000261037 SETXQ7Z333 2677 aaKnown RBP7□□□□□ -1.29
COL8A1-201ENST00000261037 KRTAP11-1Q8IUC1 163 aa7□□□□□ -1.29
COL8A1-201ENST00000261037 MAP1AP78559 2803 aaPredicted RBP7□□□□□ -1.29
COL8A1-201ENST00000261037 STAB1Q9NY15 2570 aa7□□□□□ -1.29
COL8A1-201ENST00000261037 TNRC18O15417 2968 aaPredicted RBP7□□□□□ -1.29
COL8A1-201ENST00000261037 CELSR3Q9NYQ7 3312 aa7□□□□□ -1.29
COL8A1-201ENST00000261037 GCN1Q92616 2671 aaKnown RBP6.99□□□□□ -1.29
COL8A1-201ENST00000261037 KRTAP29-1A8MX34 341 aaPredicted RBP6.98□□□□□ -1.29
COL8A1-201ENST00000261037 VCANP13611 3396 aa6.96□□□□□ -1.3
COL8A1-201ENST00000261037 DNAH14Q0VDD8 3507 aa6.96□□□□□ -1.3
COL8A1-201ENST00000261037 NOTCH1P46531 2555 aa6.95□□□□□ -1.3
COL8A1-201ENST00000261037 FLNCQ14315 2725 aa6.92□□□□□ -1.3
COL8A1-201ENST00000261037 FRYLO94915 3013 aa6.91□□□□□ -1.3
COL8A1-201ENST00000261037 COL6A3P12111 3177 aa6.91□□□□□ -1.3
COL8A1-201ENST00000261037 ITPR2Q14571 2701 aa6.91□□□□□ -1.3
COL8A1-201ENST00000261037 ATMQ13315 3056 aa6.9□□□□□ -1.3
COL8A1-201ENST00000261037 A8MU10 97 aa6.9□□□□□ -1.3
COL8A1-201ENST00000261037 UBR5O95071 2799 aaPredicted RBP6.9□□□□□ -1.31
COL8A1-201ENST00000261037 KRTAP7-1Q8IUC3 87 aa6.87□□□□□ -1.31
COL8A1-201ENST00000261037 DMXL2Q8TDJ6 3036 aa6.87□□□□□ -1.31
COL8A1-201ENST00000261037 ITPR1Q14643 2758 aa6.86□□□□□ -1.31
COL8A1-201ENST00000261037 Q6ZRN7 208 aaPredicted RBP6.86□□□□□ -1.31
COL8A1-201ENST00000261037 NBEAL2Q6ZNJ1 2754 aa6.86□□□□□ -1.31
COL8A1-201ENST00000261037 BOD1L1Q8NFC6 3051 aa6.85□□□□□ -1.31
COL8A1-201ENST00000261037 COL12A1Q99715 3063 aa6.85□□□□□ -1.31
COL8A1-201ENST00000261037 SPTBN5Q9NRC6 3674 aaKnown RBP6.84□□□□□ -1.31
COL8A1-201ENST00000261037 A8MUU9 505 aa6.83□□□□□ -1.32
COL8A1-201ENST00000261037 KRTAP13-2Q52LG2 175 aa6.83□□□□□ -1.32
COL8A1-201ENST00000261037 UTP20O75691 2785 aaKnown RBP6.82□□□□□ -1.32
COL8A1-201ENST00000261037 NBEAL1Q6ZS30 2694 aa6.82□□□□□ -1.32
COL8A1-201ENST00000261037 ADGRG4Q8IZF6 3080 aa6.82□□□□□ -1.32
COL8A1-201ENST00000261037 LRBAP50851 2863 aa6.81□□□□□ -1.32
COL8A1-201ENST00000261037 KMT2BQ9UMN6 2715 aaPredicted RBP6.81□□□□□ -1.32
COL8A1-201ENST00000261037 KALRNO60229 2985 aa6.79□□□□□ -1.32
COL8A1-201ENST00000261037 FREM2Q5SZK8 3169 aa6.79□□□□□ -1.32
COL8A1-201ENST00000261037 ASB16-AS1Q495Z4 193 aa6.79□□□□□ -1.32
COL8A1-201ENST00000261037 NSD1Q96L73 2696 aaPredicted RBP6.77□□□□□ -1.32
COL8A1-201ENST00000261037 EYSQ5T1H1 3165 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms