RNA–Protein interactions for RNA: ENST00000257181.9

PRPF38A-201, Transcript of pre-mRNA processing factor 38A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF38A, Length 5,274 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-201ENST00000257181 OCR1Q9BZK8 76 aa7.81□□□□□ -1.16
PRPF38A-201ENST00000257181 LINC01554Q52M75 96 aa7.81□□□□□ -1.16
PRPF38A-201ENST00000257181 RPL37P61927 97 aaKnown RBP7.8□□□□□ -1.16
PRPF38A-201ENST00000257181 PLAC4Q8WY50 150 aa7.8□□□□□ -1.16
PRPF38A-201ENST00000257181 PANO1I0J062 215 aa7.79□□□□□ -1.16
PRPF38A-201ENST00000257181 R4GN34 69 aa7.79□□□□□ -1.16
PRPF38A-201ENST00000257181 C4orf26Q17RF5 130 aa7.78□□□□□ -1.16
PRPF38A-201ENST00000257181 Q8NDZ9 215 aa7.78□□□□□ -1.16
PRPF38A-201ENST00000257181 SPINT4Q6UDR6 99 aa7.78□□□□□ -1.16
PRPF38A-201ENST00000257181 H1FX-AS1Q4G0G2 97 aa7.77□□□□□ -1.17
PRPF38A-201ENST00000257181 KRTAP13-1Q8IUC0 172 aa7.77□□□□□ -1.17
PRPF38A-201ENST00000257181 A0A1B0GU33 70 aa7.76□□□□□ -1.17
PRPF38A-201ENST00000257181 A0A087X002 238 aa7.75□□□□□ -1.17
PRPF38A-201ENST00000257181 KRTAP29-1A8MX34 341 aaPredicted RBP7.75□□□□□ -1.17
PRPF38A-201ENST00000257181 CHD7Q9P2D1 2997 aa7.73□□□□□ -1.17
PRPF38A-201ENST00000257181 PRO0628Q9UI54 55 aa7.7□□□□□ -1.18
PRPF38A-201ENST00000257181 H7BZZ5 65 aa7.68□□□□□ -1.18
PRPF38A-201ENST00000257181 COL6A5A8TX70 2615 aa7.68□□□□□ -1.18
PRPF38A-201ENST00000257181 GCN1Q92616 2671 aaKnown RBP7.67□□□□□ -1.18
PRPF38A-201ENST00000257181 TPRXLQ17RH7 258 aa7.66□□□□□ -1.18
PRPF38A-201ENST00000257181 LCA10Q71F78 164 aa7.65□□□□□ -1.18
PRPF38A-201ENST00000257181 TEP1Q99973 2627 aaKnown RBP7.64□□□□□ -1.19
PRPF38A-201ENST00000257181 KRTAP13-2Q52LG2 175 aa7.63□□□□□ -1.19
PRPF38A-201ENST00000257181 A0A0D9SG42 100 aa7.62□□□□□ -1.19
PRPF38A-201ENST00000257181 Q8N9P0 234 aaPredicted RBP7.61□□□□□ -1.19
PRPF38A-201ENST00000257181 STAB1Q9NY15 2570 aa7.6□□□□□ -1.19
PRPF38A-201ENST00000257181 A0A1B0GVY2 172 aa7.59□□□□□ -1.19
PRPF38A-201ENST00000257181 LINC01558Q9Y6Z2 57 aa7.58□□□□□ -1.2
PRPF38A-201ENST00000257181 AKAP13Q12802 2813 aa7.57□□□□□ -1.2
PRPF38A-201ENST00000257181 M0QZ58 72 aa7.56□□□□□ -1.2
PRPF38A-201ENST00000257181 ITPR2Q14571 2701 aa7.56□□□□□ -1.2
PRPF38A-201ENST00000257181 Q1T7F1 81 aa7.55□□□□□ -1.2
PRPF38A-201ENST00000257181 A8MUU9 505 aa7.55□□□□□ -1.2
PRPF38A-201ENST00000257181 C20orf166-AS1Q96NR2 134 aa7.55□□□□□ -1.2
PRPF38A-201ENST00000257181 CHD6Q8TD26 2715 aa7.55□□□□□ -1.2
PRPF38A-201ENST00000257181 NSD1Q96L73 2696 aaPredicted RBP7.54□□□□□ -1.2
PRPF38A-201ENST00000257181 BPTFQ12830 3046 aa7.52□□□□□ -1.21
PRPF38A-201ENST00000257181 HTTP42858 3142 aa7.51□□□□□ -1.21
PRPF38A-201ENST00000257181 KRTAP7-1Q8IUC3 87 aa7.5□□□□□ -1.21
PRPF38A-201ENST00000257181 TEX15Q9BXT5 2789 aa7.49□□□□□ -1.21
PRPF38A-201ENST00000257181 SETXQ7Z333 2677 aaKnown RBP7.49□□□□□ -1.21
PRPF38A-201ENST00000257181 KRTAP11-1Q8IUC1 163 aa7.48□□□□□ -1.21
PRPF38A-201ENST00000257181 ADM2Q7Z4H4 148 aa7.47□□□□□ -1.21
PRPF38A-201ENST00000257181 NOTCH2NLQ7Z3S9 236 aa7.47□□□□□ -1.21
PRPF38A-201ENST00000257181 UBR5O95071 2799 aaPredicted RBP7.45□□□□□ -1.22
PRPF38A-201ENST00000257181 KRTAP1-4P0C5Y4 121 aa7.43□□□□□ -1.22
PRPF38A-201ENST00000257181 LUZP6Q538Z0 58 aa7.43□□□□□ -1.22
PRPF38A-201ENST00000257181 HIVEP1P15822 2718 aa7.39□□□□□ -1.23
PRPF38A-201ENST00000257181 XP32Q5T750 250 aa7.39□□□□□ -1.23
PRPF38A-201ENST00000257181 DNAH12Q6ZR08 3092 aa7.36□□□□□ -1.23
PRPF38A-201ENST00000257181 KRTAP10-8P60410 259 aa7.34□□□□□ -1.23
PRPF38A-201ENST00000257181 MAP1AP78559 2803 aaPredicted RBP7.33□□□□□ -1.24
PRPF38A-201ENST00000257181 CEP350Q5VT06 3117 aa7.32□□□□□ -1.24
PRPF38A-201ENST00000257181 CENPEQ02224 2701 aa7.3□□□□□ -1.24
PRPF38A-201ENST00000257181 KRTAP13-3Q3SY46 172 aa7.28□□□□□ -1.24
PRPF38A-201ENST00000257181 TNRC18O15417 2968 aaPredicted RBP7.27□□□□□ -1.25
PRPF38A-201ENST00000257181 KTN1-AS1Q86SY8 53 aa7.26□□□□□ -1.25
PRPF38A-201ENST00000257181 ROMO1P60602 79 aa7.26□□□□□ -1.25
PRPF38A-201ENST00000257181 PRO2289Q9P1D8 64 aa7.26□□□□□ -1.25
PRPF38A-201ENST00000257181 PRRC2CQ9Y520 2896 aaKnown RBP7.25□□□□□ -1.25
PRPF38A-201ENST00000257181 DSPP15924 2871 aaKnown RBP7.24□□□□□ -1.25
PRPF38A-201ENST00000257181 GOLGB1Q14789 3259 aaKnown RBP7.23□□□□□ -1.25
PRPF38A-201ENST00000257181 NOTCH1P46531 2555 aa7.23□□□□□ -1.25
PRPF38A-201ENST00000257181 MGAQ8IWI9 3026 aa7.23□□□□□ -1.25
PRPF38A-201ENST00000257181 TENM4Q6N022 2769 aa7.22□□□□□ -1.25
PRPF38A-201ENST00000257181 SRCAPQ6ZRS2 3230 aa7.19□□□□□ -1.26
PRPF38A-201ENST00000257181 APCP25054 2843 aa7.18□□□□□ -1.26
PRPF38A-201ENST00000257181 NBEAL1Q6ZS30 2694 aa7.15□□□□□ -1.26
PRPF38A-201ENST00000257181 TNP1P09430 55 aa7.13□□□□□ -1.27
PRPF38A-201ENST00000257181 ITPR1Q14643 2758 aa7.09□□□□□ -1.27
PRPF38A-201ENST00000257181 Q5VV11 94 aa7.08□□□□□ -1.28
PRPF38A-201ENST00000257181 FLNCQ14315 2725 aa7.07□□□□□ -1.28
PRPF38A-201ENST00000257181 KRTAP10-10P60014 251 aa7.07□□□□□ -1.28
PRPF38A-201ENST00000257181 UTP20O75691 2785 aaKnown RBP7.06□□□□□ -1.28
PRPF38A-201ENST00000257181 SPATA8Q6RVD6 105 aa7.03□□□□□ -1.28
PRPF38A-201ENST00000257181 C5orf42Q9H799 3197 aa7.03□□□□□ -1.28
PRPF38A-201ENST00000257181 RANBP2P49792 3224 aaKnown RBP7.02□□□□□ -1.29
PRPF38A-201ENST00000257181 PP632Q6XCG6 107 aa7.01□□□□□ -1.29
PRPF38A-201ENST00000257181 STAB2Q8WWQ8 2551 aa7□□□□□ -1.29
PRPF38A-201ENST00000257181 KRTAP16-1A8MUX0 517 aa6.98□□□□□ -1.29
PRPF38A-201ENST00000257181 DMBT1Q9UGM3 2413 aaPredicted RBP6.97□□□□□ -1.29
PRPF38A-201ENST00000257181 NIPBLQ6KC79 2804 aaeCLIP6.93□□□□□ -1.3
PRPF38A-201ENST00000257181 UTRNP46939 3433 aa6.9□□□□□ -1.31
PRPF38A-201ENST00000257181 EYSQ5T1H1 3165 aa6.89□□□□□ -1.31
PRPF38A-201ENST00000257181 ASH1LQ9NR48 2969 aaKnown RBP6.86□□□□□ -1.31
PRPF38A-201ENST00000257181 H0YAA0 97 aa6.85□□□□□ -1.31
PRPF38A-201ENST00000257181 A0A0A0MQY5 61 aa6.84□□□□□ -1.31
PRPF38A-201ENST00000257181 KRTAP25-1Q3LHN0 102 aa6.84□□□□□ -1.31
PRPF38A-201ENST00000257181 LAMA1P25391 3075 aa6.79□□□□□ -1.32
PRPF38A-201ENST00000257181 PRUNE2Q8WUY3 3088 aa6.77□□□□□ -1.33
PRPF38A-201ENST00000257181 PDZD2O15018 2839 aa6.75□□□□□ -1.33
PRPF38A-201ENST00000257181 LRBAP50851 2863 aa6.74□□□□□ -1.33
PRPF38A-201ENST00000257181 NBEAL2Q6ZNJ1 2754 aa6.73□□□□□ -1.33
PRPF38A-201ENST00000257181 CYSTM1Q9H1C7 97 aa6.71□□□□□ -1.33
PRPF38A-201ENST00000257181 LAMA3Q16787 3333 aa6.71□□□□□ -1.34
PRPF38A-201ENST00000257181 ALMS1Q8TCU4 4167 aa6.7□□□□□ -1.34
PRPF38A-201ENST00000257181 FLG2Q5D862 2391 aaPredicted RBP6.68□□□□□ -1.34
PRPF38A-201ENST00000257181 WDFY4Q6ZS81 3184 aa6.68□□□□□ -1.34
PRPF38A-201ENST00000257181 MT1HL1P0DM35 61 aa6.68□□□□□ -1.34
PRPF38A-201ENST00000257181 A8MU10 97 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms