RNA–Protein interactions for RNA: ENST00000254624.9

EFR3A-201, Transcript of EFR3 homolog A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFR3A, Length 5,438 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFR3A-201ENST00000254624 MKI67P46013 3256 aaKnown RBP11.02□□□□□ -0.64
EFR3A-201ENST00000254624 LINC00483Q53H64 154 aa11□□□□□ -0.65
EFR3A-201ENST00000254624 TEX15Q9BXT5 2789 aa10.97□□□□□ -0.65
EFR3A-201ENST00000254624 SPINT4Q6UDR6 99 aa10.97□□□□□ -0.65
EFR3A-201ENST00000254624 TEP1Q99973 2627 aaKnown RBP10.96□□□□□ -0.65
EFR3A-201ENST00000254624 LINC01554Q52M75 96 aa10.95□□□□□ -0.66
EFR3A-201ENST00000254624 COL6A5A8TX70 2615 aa10.92□□□□□ -0.66
EFR3A-201ENST00000254624 CDC42SE1Q9NRR8 79 aa10.91□□□□□ -0.66
EFR3A-201ENST00000254624 A0A0D9SG42 100 aa10.91□□□□□ -0.66
EFR3A-201ENST00000254624 Q1T7F1 81 aa10.91□□□□□ -0.66
EFR3A-201ENST00000254624 DSPP15924 2871 aaKnown RBP10.91□□□□□ -0.66
EFR3A-201ENST00000254624 KRTAP4-16G5E9R7 235 aaPredicted RBP10.9□□□□□ -0.66
EFR3A-201ENST00000254624 Q5W150 140 aa10.89□□□□□ -0.67
EFR3A-201ENST00000254624 SEC61BP60468 96 aaKnown RBP10.89□□□□□ -0.67
EFR3A-201ENST00000254624 CHD6Q8TD26 2715 aa10.89□□□□□ -0.67
EFR3A-201ENST00000254624 Q8N9P0 234 aaPredicted RBP10.87□□□□□ -0.67
EFR3A-201ENST00000254624 BAHCC1Q9P281 2608 aa10.87□□□□□ -0.67
EFR3A-201ENST00000254624 CSAG1Q6PB30 78 aa10.85□□□□□ -0.67
EFR3A-201ENST00000254624 STAB1Q9NY15 2570 aa10.85□□□□□ -0.67
EFR3A-201ENST00000254624 PANO1I0J062 215 aa10.85□□□□□ -0.67
EFR3A-201ENST00000254624 S4R3F8 94 aa10.84□□□□□ -0.67
EFR3A-201ENST00000254624 KRTAP21-3Q3LHN1 58 aa10.83□□□□□ -0.67
EFR3A-201ENST00000254624 CFAP54Q96N23 3096 aa10.83□□□□□ -0.68
EFR3A-201ENST00000254624 WDFY4Q6ZS81 3184 aa10.83□□□□□ -0.68
EFR3A-201ENST00000254624 A0A1B0GU33 70 aa10.83□□□□□ -0.68
EFR3A-201ENST00000254624 M0R2T5 61 aa10.83□□□□□ -0.68
EFR3A-201ENST00000254624 FP248Q71RG6 208 aaPredicted RBP10.83□□□□□ -0.68
EFR3A-201ENST00000254624 BRCA2P51587 3418 aa10.83□□□□□ -0.68
EFR3A-201ENST00000254624 SPINK7P58062 85 aa10.82□□□□□ -0.68
EFR3A-201ENST00000254624 PRUNE2Q8WUY3 3088 aa10.78□□□□□ -0.68
EFR3A-201ENST00000254624 Q6ZRN7 208 aaPredicted RBP10.78□□□□□ -0.68
EFR3A-201ENST00000254624 SETXQ7Z333 2677 aaKnown RBP10.77□□□□□ -0.69
EFR3A-201ENST00000254624 LINC01558Q9Y6Z2 57 aa10.76□□□□□ -0.69
EFR3A-201ENST00000254624 GCN1Q92616 2671 aaKnown RBP10.75□□□□□ -0.69
EFR3A-201ENST00000254624 Q75L30 129 aa10.75□□□□□ -0.69
EFR3A-201ENST00000254624 KTN1-AS1Q86SY8 53 aa10.75□□□□□ -0.69
EFR3A-201ENST00000254624 OXTP01178 125 aa10.73□□□□□ -0.69
EFR3A-201ENST00000254624 CAMK2N1Q7Z7J9 78 aa10.71□□□□□ -0.7
EFR3A-201ENST00000254624 NOTCH1P46531 2555 aa10.7□□□□□ -0.7
EFR3A-201ENST00000254624 DMAC1Q96GE9 116 aa10.7□□□□□ -0.7
EFR3A-201ENST00000254624 LCA10Q71F78 164 aa10.67□□□□□ -0.7
EFR3A-201ENST00000254624 A0A0C4DFX4 3053 aa10.67□□□□□ -0.7
EFR3A-201ENST00000254624 A0A087X002 238 aa10.66□□□□□ -0.7
EFR3A-201ENST00000254624 LAMA2P24043 3122 aaKnown RBP10.66□□□□□ -0.7
EFR3A-201ENST00000254624 RPS29P62273 56 aaKnown RBP10.66□□□□□ -0.7
EFR3A-201ENST00000254624 NBEAL1Q6ZS30 2694 aa10.64□□□□□ -0.71
EFR3A-201ENST00000254624 ASB16-AS1Q495Z4 193 aa10.63□□□□□ -0.71
EFR3A-201ENST00000254624 ITPR2Q14571 2701 aa10.63□□□□□ -0.71
EFR3A-201ENST00000254624 UNC80Q8N2C7 3258 aa10.62□□□□□ -0.71
EFR3A-201ENST00000254624 TRIOO75962 3097 aa10.6□□□□□ -0.71
EFR3A-201ENST00000254624 KRTAP29-1A8MX34 341 aaPredicted RBP10.6□□□□□ -0.71
EFR3A-201ENST00000254624 UBR5O95071 2799 aaPredicted RBP10.58□□□□□ -0.72
EFR3A-201ENST00000254624 KRTAP11-1Q8IUC1 163 aa10.57□□□□□ -0.72
EFR3A-201ENST00000254624 CYSTM1Q9H1C7 97 aa10.57□□□□□ -0.72
EFR3A-201ENST00000254624 KMT2BQ9UMN6 2715 aaPredicted RBP10.57□□□□□ -0.72
EFR3A-201ENST00000254624 CDH23Q9H251 3354 aa10.55□□□□□ -0.72
EFR3A-201ENST00000254624 KRTAP7-1Q8IUC3 87 aa10.55□□□□□ -0.72
EFR3A-201ENST00000254624 NSD1Q96L73 2696 aaPredicted RBP10.55□□□□□ -0.72
EFR3A-201ENST00000254624 R4GN34 69 aa10.54□□□□□ -0.72
EFR3A-201ENST00000254624 NBEAL2Q6ZNJ1 2754 aa10.52□□□□□ -0.73
EFR3A-201ENST00000254624 VPS13AQ96RL7 3174 aa10.52□□□□□ -0.73
EFR3A-201ENST00000254624 XIRP2A4UGR9 3374 aa10.51□□□□□ -0.73
EFR3A-201ENST00000254624 ITPR1Q14643 2758 aa10.5□□□□□ -0.73
EFR3A-201ENST00000254624 KRTAP13-1Q8IUC0 172 aa10.5□□□□□ -0.73
EFR3A-201ENST00000254624 FRYQ5TBA9 3013 aa10.49□□□□□ -0.73
EFR3A-201ENST00000254624 FLNCQ14315 2725 aa10.48□□□□□ -0.73
EFR3A-201ENST00000254624 Q5XG85 94 aa10.48□□□□□ -0.73
EFR3A-201ENST00000254624 MAP1AP78559 2803 aaPredicted RBP10.48□□□□□ -0.73
EFR3A-201ENST00000254624 Q5VV11 94 aa10.46□□□□□ -0.73
EFR3A-201ENST00000254624 KRTAP13-2Q52LG2 175 aa10.41□□□□□ -0.74
EFR3A-201ENST00000254624 NOTCH2NLQ7Z3S9 236 aa10.39□□□□□ -0.75
EFR3A-201ENST00000254624 SZT2Q5T011 3432 aa10.38□□□□□ -0.75
EFR3A-201ENST00000254624 HIVEP1P15822 2718 aa10.37□□□□□ -0.75
EFR3A-201ENST00000254624 H1FX-AS1Q4G0G2 97 aa10.37□□□□□ -0.75
EFR3A-201ENST00000254624 LUZP6Q538Z0 58 aa10.36□□□□□ -0.75
EFR3A-201ENST00000254624 RPL37P61927 97 aaKnown RBP10.36□□□□□ -0.75
EFR3A-201ENST00000254624 ATMQ13315 3056 aa10.35□□□□□ -0.75
EFR3A-201ENST00000254624 UTP20O75691 2785 aaKnown RBP10.35□□□□□ -0.75
EFR3A-201ENST00000254624 M0QZ58 72 aa10.34□□□□□ -0.75
EFR3A-201ENST00000254624 TNRC18O15417 2968 aaPredicted RBP10.33□□□□□ -0.76
EFR3A-201ENST00000254624 ADM2Q7Z4H4 148 aa10.28□□□□□ -0.76
EFR3A-201ENST00000254624 COL12A1Q99715 3063 aa10.27□□□□□ -0.77
EFR3A-201ENST00000254624 FRYLO94915 3013 aa10.26□□□□□ -0.77
EFR3A-201ENST00000254624 LAMA1P25391 3075 aa10.26□□□□□ -0.77
EFR3A-201ENST00000254624 APCP25054 2843 aa10.26□□□□□ -0.77
EFR3A-201ENST00000254624 STAB2Q8WWQ8 2551 aa10.25□□□□□ -0.77
EFR3A-201ENST00000254624 DMXL2Q8TDJ6 3036 aa10.21□□□□□ -0.77
EFR3A-201ENST00000254624 ROMO1P60602 79 aa10.2□□□□□ -0.78
EFR3A-201ENST00000254624 PLAC4Q8WY50 150 aa10.2□□□□□ -0.78
EFR3A-201ENST00000254624 TACC2O95359 2948 aa10.19□□□□□ -0.78
EFR3A-201ENST00000254624 LRBAP50851 2863 aa10.18□□□□□ -0.78
EFR3A-201ENST00000254624 EYSQ5T1H1 3165 aa10.17□□□□□ -0.78
EFR3A-201ENST00000254624 CELSR3Q9NYQ7 3312 aa10.17□□□□□ -0.78
EFR3A-201ENST00000254624 KALRNO60229 2985 aa10.17□□□□□ -0.78
EFR3A-201ENST00000254624 ADGRG4Q8IZF6 3080 aa10.14□□□□□ -0.79
EFR3A-201ENST00000254624 VCANP13611 3396 aa10.14□□□□□ -0.79
EFR3A-201ENST00000254624 PRAC1Q96KF2 57 aa10.12□□□□□ -0.79
EFR3A-201ENST00000254624 SPATA8Q6RVD6 105 aa10.11□□□□□ -0.79
EFR3A-201ENST00000254624 DMBT1Q9UGM3 2413 aaPredicted RBP10.1□□□□□ -0.79
EFR3A-201ENST00000254624 BOD1L1Q8NFC6 3051 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 163.6 ms