RNA–Protein interactions for RNA: ENST00000253812.7

PCDHGA3-201, Transcript of protocadherin gamma subfamily A, 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA3, Length 4,771 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-201ENST00000253812 AKAP13Q12802 2813 aa8.59□□□□□ -1.03
PCDHGA3-201ENST00000253812 C15orf56Q8N910 161 aa8.59□□□□□ -1.03
PCDHGA3-201ENST00000253812 Q5VV11 94 aa8.57□□□□□ -1.04
PCDHGA3-201ENST00000253812 A0A0G2JQZ4 141 aa8.57□□□□□ -1.04
PCDHGA3-201ENST00000253812 A0A1W2PNN7 141 aa8.57□□□□□ -1.04
PCDHGA3-201ENST00000253812 DNAH10OSP0CZ25 163 aa8.56□□□□□ -1.04
PCDHGA3-201ENST00000253812 Q8NAQ8 132 aa8.56□□□□□ -1.04
PCDHGA3-201ENST00000253812 PLA2G2DQ9UNK4 145 aa8.56□□□□□ -1.04
PCDHGA3-201ENST00000253812 A0A0A0MQY5 61 aa8.55□□□□□ -1.04
PCDHGA3-201ENST00000253812 ASPMQ8IZT6 3477 aa8.54□□□□□ -1.04
PCDHGA3-201ENST00000253812 OXTP01178 125 aa8.53□□□□□ -1.04
PCDHGA3-201ENST00000253812 DMAC1Q96GE9 116 aa8.52□□□□□ -1.05
PCDHGA3-201ENST00000253812 TLX1NBP0CAT3 122 aa8.52□□□□□ -1.05
PCDHGA3-201ENST00000253812 CSAG1Q6PB30 78 aa8.52□□□□□ -1.05
PCDHGA3-201ENST00000253812 A0A0D9SG42 100 aa8.51□□□□□ -1.05
PCDHGA3-201ENST00000253812 RTL8CO15255 209 aa8.5□□□□□ -1.05
PCDHGA3-201ENST00000253812 KRTAP1-3Q8IUG1 177 aa8.5□□□□□ -1.05
PCDHGA3-201ENST00000253812 SPRR4Q96PI1 79 aa8.5□□□□□ -1.05
PCDHGA3-201ENST00000253812 DMXL1Q9Y485 3027 aa8.49□□□□□ -1.05
PCDHGA3-201ENST00000253812 CFAP47Q6ZTR5 3102 aa8.49□□□□□ -1.05
PCDHGA3-201ENST00000253812 A0A1B0GU33 70 aa8.48□□□□□ -1.05
PCDHGA3-201ENST00000253812 COL6A5A8TX70 2615 aa8.47□□□□□ -1.05
PCDHGA3-201ENST00000253812 ADGRG4Q8IZF6 3080 aa8.47□□□□□ -1.05
PCDHGA3-201ENST00000253812 NBDYA0A0U1RRE5 68 aa8.47□□□□□ -1.05
PCDHGA3-201ENST00000253812 CSNK1G2-AS1Q8NCQ2 148 aa8.46□□□□□ -1.05
PCDHGA3-201ENST00000253812 ZNF861PO60384 105 aa8.46□□□□□ -1.06
PCDHGA3-201ENST00000253812 KRTAP10-3P60369 221 aa8.46□□□□□ -1.06
PCDHGA3-201ENST00000253812 Q8N1X5 172 aa8.45□□□□□ -1.06
PCDHGA3-201ENST00000253812 IGSF10Q6WRI0 2623 aa8.44□□□□□ -1.06
PCDHGA3-201ENST00000253812 J3QL48 77 aa8.44□□□□□ -1.06
PCDHGA3-201ENST00000253812 CHD6Q8TD26 2715 aa8.43□□□□□ -1.06
PCDHGA3-201ENST00000253812 KRTAP1-1Q07627 177 aa8.43□□□□□ -1.06
PCDHGA3-201ENST00000253812 SPINK7P58062 85 aa8.43□□□□□ -1.06
PCDHGA3-201ENST00000253812 DMXL2Q8TDJ6 3036 aa8.43□□□□□ -1.06
PCDHGA3-201ENST00000253812 C19orf73Q9NVV2 129 aa8.43□□□□□ -1.06
PCDHGA3-201ENST00000253812 GIG44P09565 113 aaPredicted RBP8.42□□□□□ -1.06
PCDHGA3-201ENST00000253812 ZFHX4Q86UP3 3567 aa8.42□□□□□ -1.06
PCDHGA3-201ENST00000253812 TEX15Q9BXT5 2789 aa8.41□□□□□ -1.06
PCDHGA3-201ENST00000253812 LAMA5O15230 3695 aa8.41□□□□□ -1.06
PCDHGA3-201ENST00000253812 NBEAL1Q6ZS30 2694 aa8.41□□□□□ -1.06
PCDHGA3-201ENST00000253812 HRES1P13985 223 aa8.4□□□□□ -1.06
PCDHGA3-201ENST00000253812 CR1P17927 2039 aa8.4□□□□□ -1.06
PCDHGA3-201ENST00000253812 LINC00612Q8N6U2 182 aa8.4□□□□□ -1.07
PCDHGA3-201ENST00000253812 ASB16-AS1Q495Z4 193 aa8.39□□□□□ -1.07
PCDHGA3-201ENST00000253812 KRTAP10-11P60412 298 aa8.39□□□□□ -1.07
PCDHGA3-201ENST00000253812 UNC79Q9P2D8 2635 aa8.38□□□□□ -1.07
PCDHGA3-201ENST00000253812 ATMQ13315 3056 aa8.37□□□□□ -1.07
PCDHGA3-201ENST00000253812 IGLV5-37A0A075B6J1 123 aa8.36□□□□□ -1.07
PCDHGA3-201ENST00000253812 CNBPP62633 177 aaKnown RBP8.35□□□□□ -1.07
PCDHGA3-201ENST00000253812 K7EIL1 84 aa8.35□□□□□ -1.07
PCDHGA3-201ENST00000253812 ZNF575Q86XF7 245 aa8.35□□□□□ -1.07
PCDHGA3-201ENST00000253812 DCHS1Q96JQ0 3298 aa8.34□□□□□ -1.07
PCDHGA3-201ENST00000253812 LINC00304Q8N9R0 145 aa8.33□□□□□ -1.08
PCDHGA3-201ENST00000253812 FLG2Q5D862 2391 aaPredicted RBP8.33□□□□□ -1.08
PCDHGA3-201ENST00000253812 TACC2O95359 2948 aa8.32□□□□□ -1.08
PCDHGA3-201ENST00000253812 KALRNO60229 2985 aa8.31□□□□□ -1.08
PCDHGA3-201ENST00000253812 MMP24-AS1A0A0U1RRL7 71 aa8.31□□□□□ -1.08
PCDHGA3-201ENST00000253812 FLNCQ14315 2725 aa8.31□□□□□ -1.08
PCDHGA3-201ENST00000253812 ANAPC11Q9NYG5 84 aa8.31□□□□□ -1.08
PCDHGA3-201ENST00000253812 LINC00483Q53H64 154 aa8.29□□□□□ -1.08
PCDHGA3-201ENST00000253812 C9orf92A6NGG3 77 aa8.29□□□□□ -1.08
PCDHGA3-201ENST00000253812 KRTAP16-1A8MUX0 517 aa8.29□□□□□ -1.08
PCDHGA3-201ENST00000253812 LRBAP50851 2863 aa8.26□□□□□ -1.09
PCDHGA3-201ENST00000253812 GCN1Q92616 2671 aaKnown RBP8.26□□□□□ -1.09
PCDHGA3-201ENST00000253812 UBR5O95071 2799 aaPredicted RBP8.26□□□□□ -1.09
PCDHGA3-201ENST00000253812 IGLV7-43P04211 117 aa8.25□□□□□ -1.09
PCDHGA3-201ENST00000253812 PSORS1C2Q9UIG4 136 aa8.25□□□□□ -1.09
PCDHGA3-201ENST00000253812 DMBT1Q9UGM3 2413 aaPredicted RBP8.25□□□□□ -1.09
PCDHGA3-201ENST00000253812 SMG1Q96Q15 3661 aaKnown RBP8.23□□□□□ -1.09
PCDHGA3-201ENST00000253812 ZZEF1O43149 2961 aa8.21□□□□□ -1.1
PCDHGA3-201ENST00000253812 RELNP78509 3460 aa8.2□□□□□ -1.1
PCDHGA3-201ENST00000253812 COL12A1Q99715 3063 aa8.2□□□□□ -1.1
PCDHGA3-201ENST00000253812 COX6B2Q6YFQ2 88 aa8.19□□□□□ -1.1
PCDHGA3-201ENST00000253812 ROMO1P60602 79 aa8.18□□□□□ -1.1
PCDHGA3-201ENST00000253812 CAMK2N1Q7Z7J9 78 aa8.18□□□□□ -1.1
PCDHGA3-201ENST00000253812 LINC00472Q9H8W2 130 aa8.17□□□□□ -1.1
PCDHGA3-201ENST00000253812 CASC10Q5T4H9 136 aa8.17□□□□□ -1.1
PCDHGA3-201ENST00000253812 A0A087WTM6 91 aa8.17□□□□□ -1.1
PCDHGA3-201ENST00000253812 A6NN06 94 aa8.17□□□□□ -1.1
PCDHGA3-201ENST00000253812 RPL37P61927 97 aaKnown RBP8.15□□□□□ -1.1
PCDHGA3-201ENST00000253812 SPRR1AP35321 89 aa8.15□□□□□ -1.11
PCDHGA3-201ENST00000253812 SPENQ96T58 3664 aaKnown RBP8.14□□□□□ -1.11
PCDHGA3-201ENST00000253812 Q5W150 140 aa8.14□□□□□ -1.11
PCDHGA3-201ENST00000253812 NBEAL2Q6ZNJ1 2754 aa8.13□□□□□ -1.11
PCDHGA3-201ENST00000253812 STAB2Q8WWQ8 2551 aa8.13□□□□□ -1.11
PCDHGA3-201ENST00000253812 Q8NDZ9 215 aa8.13□□□□□ -1.11
PCDHGA3-201ENST00000253812 ITPR1Q14643 2758 aa8.12□□□□□ -1.11
PCDHGA3-201ENST00000253812 ZCCHC13Q8WW36 166 aaKnown RBP8.11□□□□□ -1.11
PCDHGA3-201ENST00000253812 ASH1LQ9NR48 2969 aaKnown RBP8.1□□□□□ -1.11
PCDHGA3-201ENST00000253812 SPATA8Q6RVD6 105 aa8.09□□□□□ -1.11
PCDHGA3-201ENST00000253812 TNP2Q05952 138 aa8.09□□□□□ -1.11
PCDHGA3-201ENST00000253812 SPRR1BP22528 89 aa8.08□□□□□ -1.12
PCDHGA3-201ENST00000253812 SMR3BP02814 79 aaPredicted RBP8.07□□□□□ -1.12
PCDHGA3-201ENST00000253812 ITPR2Q14571 2701 aa8.06□□□□□ -1.12
PCDHGA3-201ENST00000253812 NSD1Q96L73 2696 aaPredicted RBP8.04□□□□□ -1.12
PCDHGA3-201ENST00000253812 DCHS2Q6V1P9 2916 aa8.04□□□□□ -1.12
PCDHGA3-201ENST00000253812 CSMD1Q96PZ7 3565 aa8.03□□□□□ -1.12
PCDHGA3-201ENST00000253812 KRTAP25-1Q3LHN0 102 aa8.02□□□□□ -1.13
PCDHGA3-201ENST00000253812 Q6ZR54 194 aa8.02□□□□□ -1.13
PCDHGA3-201ENST00000253812 H1FX-AS1Q4G0G2 97 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms