RNA–Protein interactions for RNA: ENST00000252699.6

ACTN4-201, Transcript of actinin alpha 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ACTN4, Length 4,963 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-201ENST00000252699 SPINK1P00995 79 aa10.82□□□□□ -0.68
ACTN4-201ENST00000252699 SPRR4Q96PI1 79 aa10.82□□□□□ -0.68
ACTN4-201ENST00000252699 A0A1W2PNM2 257 aa10.8□□□□□ -0.68
ACTN4-201ENST00000252699 STAB2Q8WWQ8 2551 aa10.8□□□□□ -0.68
ACTN4-201ENST00000252699 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.8□□□□□ -0.68
ACTN4-201ENST00000252699 KMT2BQ9UMN6 2715 aaPredicted RBP10.8□□□□□ -0.68
ACTN4-201ENST00000252699 CRYBG3Q68DQ2 2970 aa10.79□□□□□ -0.68
ACTN4-201ENST00000252699 Q8NDZ9 215 aa10.79□□□□□ -0.68
ACTN4-201ENST00000252699 KRTAP1-5Q9BYS1 174 aa10.78□□□□□ -0.68
ACTN4-201ENST00000252699 NF1P21359 2839 aa10.77□□□□□ -0.69
ACTN4-201ENST00000252699 PRR15Q8IV56 129 aa10.77□□□□□ -0.69
ACTN4-201ENST00000252699 IGLV5-48A0A075B6I7 105 aa10.76□□□□□ -0.69
ACTN4-201ENST00000252699 Q96NJ1 140 aa10.76□□□□□ -0.69
ACTN4-201ENST00000252699 H3BPC8 53 aa10.76□□□□□ -0.69
ACTN4-201ENST00000252699 C8orf87E5RJ46 101 aa10.75□□□□□ -0.69
ACTN4-201ENST00000252699 LINC00304Q8N9R0 145 aa10.75□□□□□ -0.69
ACTN4-201ENST00000252699 MRPL34Q9BQ48 92 aaKnown RBP10.75□□□□□ -0.69
ACTN4-201ENST00000252699 K7ERS5 55 aa10.74□□□□□ -0.69
ACTN4-201ENST00000252699 KRTAP26-1Q6PEX3 210 aa10.73□□□□□ -0.69
ACTN4-201ENST00000252699 TENM4Q6N022 2769 aa10.73□□□□□ -0.69
ACTN4-201ENST00000252699 OBSCN-AS1Q96MR7 158 aa10.73□□□□□ -0.69
ACTN4-201ENST00000252699 DCHS2Q6V1P9 2916 aa10.73□□□□□ -0.69
ACTN4-201ENST00000252699 A0A0U1RQV1 116 aa10.72□□□□□ -0.69
ACTN4-201ENST00000252699 LINC01600Q96MT4 127 aa10.72□□□□□ -0.69
ACTN4-201ENST00000252699 C8orf17Q9NRJ1 99 aa10.71□□□□□ -0.69
ACTN4-201ENST00000252699 SPAG11AQ6PDA7 123 aa10.7□□□□□ -0.7
ACTN4-201ENST00000252699 PSPHP1O15172 72 aa10.69□□□□□ -0.7
ACTN4-201ENST00000252699 A0A1B0GVX0 72 aa10.69□□□□□ -0.7
ACTN4-201ENST00000252699 C7orf65Q6ZTY9 151 aa10.69□□□□□ -0.7
ACTN4-201ENST00000252699 MUC3AQ02505 3323 aa10.69□□□□□ -0.7
ACTN4-201ENST00000252699 DSCR10P59022 87 aa10.68□□□□□ -0.7
ACTN4-201ENST00000252699 FBN2P35556 2912 aa10.67□□□□□ -0.7
ACTN4-201ENST00000252699 SPRR1AP35321 89 aa10.64□□□□□ -0.71
ACTN4-201ENST00000252699 LOC101927531A0A1B0GV80 90 aa10.64□□□□□ -0.71
ACTN4-201ENST00000252699 ACYP2P14621 99 aa10.64□□□□□ -0.71
ACTN4-201ENST00000252699 J3QL48 77 aa10.62□□□□□ -0.71
ACTN4-201ENST00000252699 PLAC8Q9NZF1 115 aa10.62□□□□□ -0.71
ACTN4-201ENST00000252699 SVIPQ8NHG7 77 aa10.61□□□□□ -0.71
ACTN4-201ENST00000252699 ATP11AUNQ6ZP68 121 aa10.6□□□□□ -0.71
ACTN4-201ENST00000252699 RELNP78509 3460 aa10.6□□□□□ -0.71
ACTN4-201ENST00000252699 C9orf92A6NGG3 77 aa10.56□□□□□ -0.72
ACTN4-201ENST00000252699 RPS28P62857 69 aaKnown RBP10.55□□□□□ -0.72
ACTN4-201ENST00000252699 KLKP1Q107X0 134 aa10.54□□□□□ -0.72
ACTN4-201ENST00000252699 MXRA5Q9NR99 2828 aa10.52□□□□□ -0.73
ACTN4-201ENST00000252699 DCHS1Q96JQ0 3298 aa10.51□□□□□ -0.73
ACTN4-201ENST00000252699 LAMA5O15230 3695 aa10.49□□□□□ -0.73
ACTN4-201ENST00000252699 A0A1B0GU69 56 aa10.48□□□□□ -0.73
ACTN4-201ENST00000252699 PRR26Q8N8Z3 221 aa10.48□□□□□ -0.73
ACTN4-201ENST00000252699 CD164Q04900 197 aa10.47□□□□□ -0.73
ACTN4-201ENST00000252699 WDFY3Q8IZQ1 3526 aa10.46□□□□□ -0.73
ACTN4-201ENST00000252699 KRTAP10-2P60368 255 aa10.44□□□□□ -0.74
ACTN4-201ENST00000252699 SPRR1BP22528 89 aa10.44□□□□□ -0.74
ACTN4-201ENST00000252699 FAM229BQ4G0N7 80 aa10.44□□□□□ -0.74
ACTN4-201ENST00000252699 Q6ZR54 194 aa10.44□□□□□ -0.74
ACTN4-201ENST00000252699 H7BZZ5 65 aa10.43□□□□□ -0.74
ACTN4-201ENST00000252699 LCE6AA0A183 80 aa10.43□□□□□ -0.74
ACTN4-201ENST00000252699 PMAIP1Q13794 54 aa10.43□□□□□ -0.74
ACTN4-201ENST00000252699 KRTAP10-1P60331 282 aa10.41□□□□□ -0.74
ACTN4-201ENST00000252699 DMDP11532 3685 aa10.41□□□□□ -0.74
ACTN4-201ENST00000252699 PANO1I0J062 215 aa10.41□□□□□ -0.74
ACTN4-201ENST00000252699 COA5Q86WW8 74 aa10.41□□□□□ -0.74
ACTN4-201ENST00000252699 OCR1Q9BZK8 76 aa10.38□□□□□ -0.75
ACTN4-201ENST00000252699 C4orf26Q17RF5 130 aa10.38□□□□□ -0.75
ACTN4-201ENST00000252699 ASPMQ8IZT6 3477 aa10.38□□□□□ -0.75
ACTN4-201ENST00000252699 IGLV8-61A0A075B6I0 122 aa10.37□□□□□ -0.75
ACTN4-201ENST00000252699 C1orf195Q5TG92 126 aa10.36□□□□□ -0.75
ACTN4-201ENST00000252699 KRTAP4-16G5E9R7 235 aaPredicted RBP10.34□□□□□ -0.75
ACTN4-201ENST00000252699 Q6ZRN7 208 aaPredicted RBP10.29□□□□□ -0.76
ACTN4-201ENST00000252699 LINC00472Q9H8W2 130 aa10.28□□□□□ -0.76
ACTN4-201ENST00000252699 MMP24-AS1A0A0U1RRL7 71 aa10.27□□□□□ -0.77
ACTN4-201ENST00000252699 A8MUN3 132 aa10.26□□□□□ -0.77
ACTN4-201ENST00000252699 DMBT1Q9UGM3 2413 aaPredicted RBP10.26□□□□□ -0.77
ACTN4-201ENST00000252699 IGLV7-46A0A075B6I9 117 aa10.24□□□□□ -0.77
ACTN4-201ENST00000252699 COX6B2Q6YFQ2 88 aa10.24□□□□□ -0.77
ACTN4-201ENST00000252699 SPANXA2-OT1Q8N9U9 137 aa10.24□□□□□ -0.77
ACTN4-201ENST00000252699 PRO0628Q9UI54 55 aa10.22□□□□□ -0.77
ACTN4-201ENST00000252699 ZFHX4Q86UP3 3567 aa10.22□□□□□ -0.77
ACTN4-201ENST00000252699 Q8N1X5 172 aa10.22□□□□□ -0.77
ACTN4-201ENST00000252699 KRTAP21-3Q3LHN1 58 aa10.21□□□□□ -0.78
ACTN4-201ENST00000252699 LINC00483Q53H64 154 aa10.19□□□□□ -0.78
ACTN4-201ENST00000252699 PDZD2O15018 2839 aa10.18□□□□□ -0.78
ACTN4-201ENST00000252699 KRTAP11-1Q8IUC1 163 aa10.18□□□□□ -0.78
ACTN4-201ENST00000252699 KRTAP7-1Q8IUC3 87 aa10.18□□□□□ -0.78
ACTN4-201ENST00000252699 Q5VSD8 79 aa10.16□□□□□ -0.78
ACTN4-201ENST00000252699 CELSR1Q9NYQ6 3014 aa10.15□□□□□ -0.78
ACTN4-201ENST00000252699 TENM1Q9UKZ4 2725 aa10.13□□□□□ -0.79
ACTN4-201ENST00000252699 CYP4F30PQ9H0H9 118 aa10.13□□□□□ -0.79
ACTN4-201ENST00000252699 RBM12B-AS1Q9P1G2 102 aa10.13□□□□□ -0.79
ACTN4-201ENST00000252699 TENM3Q9P273 2699 aa10.13□□□□□ -0.79
ACTN4-201ENST00000252699 UQCR11O14957 56 aa10.11□□□□□ -0.79
ACTN4-201ENST00000252699 HRES1P13985 223 aa10.09□□□□□ -0.79
ACTN4-201ENST00000252699 A0A087X002 238 aa10.08□□□□□ -0.8
ACTN4-201ENST00000252699 Q6ZSA8 131 aa10.07□□□□□ -0.8
ACTN4-201ENST00000252699 ZCCHC13Q8WW36 166 aaKnown RBP10.07□□□□□ -0.8
ACTN4-201ENST00000252699 Q8N9P0 234 aaPredicted RBP10.07□□□□□ -0.8
ACTN4-201ENST00000252699 OTOGQ6ZRI0 2925 aa10.04□□□□□ -0.8
ACTN4-201ENST00000252699 CYSTM1Q9H1C7 97 aa10.04□□□□□ -0.8
ACTN4-201ENST00000252699 Q5W150 140 aa10.01□□□□□ -0.81
ACTN4-201ENST00000252699 FLG2Q5D862 2391 aaPredicted RBP10□□□□□ -0.81
ACTN4-201ENST00000252699 MIR22HGQ0VDD5 57 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms