RNA–Protein interactions for RNA: ENST00000233072.9

CPS1-201, Transcript of carbamoyl-phosphate synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPS1, Length 5,821 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1-201ENST00000233072 FN1P02751 2386 aaKnown RBP4.07□□□□□ -1.76
CPS1-201ENST00000233072 MYO9AB2RTY4 2548 aa4.06□□□□□ -1.76
CPS1-201ENST00000233072 KRTAP13-2Q52LG2 175 aa4.04□□□□□ -1.76
CPS1-201ENST00000233072 ANKRD11Q6UB99 2663 aaPredicted RBP4.04□□□□□ -1.76
CPS1-201ENST00000233072 KRTAP7-1Q8IUC3 87 aa4.04□□□□□ -1.76
CPS1-201ENST00000233072 KRTAP11-1Q8IUC1 163 aa4.04□□□□□ -1.76
CPS1-201ENST00000233072 TLN2Q9Y4G6 2542 aa4.04□□□□□ -1.76
CPS1-201ENST00000233072 USP9XQ93008 2570 aaPredicted RBP4.02□□□□□ -1.77
CPS1-201ENST00000233072 PP632Q6XCG6 107 aa4.01□□□□□ -1.77
CPS1-201ENST00000233072 PKD1L2Q7Z442 2459 aa4□□□□□ -1.77
CPS1-201ENST00000233072 TNP1P09430 55 aa3.99□□□□□ -1.77
CPS1-201ENST00000233072 JMJD1CQ15652 2540 aa3.99□□□□□ -1.77
CPS1-201ENST00000233072 F8P00451 2351 aa3.98□□□□□ -1.77
CPS1-201ENST00000233072 SRCAPQ6ZRS2 3230 aa3.97□□□□□ -1.77
CPS1-201ENST00000233072 A8MU10 97 aa3.97□□□□□ -1.77
CPS1-201ENST00000233072 MYO18BQ8IUG5 2567 aa3.96□□□□□ -1.78
CPS1-201ENST00000233072 CHD8Q9HCK8 2581 aa3.95□□□□□ -1.78
CPS1-201ENST00000233072 C10orf95Q9H7T3 257 aa3.94□□□□□ -1.78
CPS1-201ENST00000233072 FASNP49327 2511 aaKnown RBP3.93□□□□□ -1.78
CPS1-201ENST00000233072 ZFYVE26Q68DK2 2539 aa3.92□□□□□ -1.78
CPS1-201ENST00000233072 CEP295Q9C0D2 2601 aa3.92□□□□□ -1.78
CPS1-201ENST00000233072 USP9YO00507 2555 aaPredicted RBP3.9□□□□□ -1.78
CPS1-201ENST00000233072 TPRXLQ17RH7 258 aa3.87□□□□□ -1.79
CPS1-201ENST00000233072 XP32Q5T750 250 aa3.87□□□□□ -1.79
CPS1-201ENST00000233072 POLQO75417 2590 aa3.87□□□□□ -1.79
CPS1-201ENST00000233072 KRTAP1-4P0C5Y4 121 aa3.86□□□□□ -1.79
CPS1-201ENST00000233072 ACANP16112 2415 aa3.86□□□□□ -1.79
CPS1-201ENST00000233072 MTORP42345 2549 aa3.86□□□□□ -1.79
CPS1-201ENST00000233072 P0C880 135 aa3.84□□□□□ -1.79
CPS1-201ENST00000233072 PRO2289Q9P1D8 64 aa3.81□□□□□ -1.8
CPS1-201ENST00000233072 SPTBN4Q9H254 2564 aa3.81□□□□□ -1.8
CPS1-201ENST00000233072 FLNAP21333 2647 aaKnown RBP3.78□□□□□ -1.8
CPS1-201ENST00000233072 WDR87Q6ZQQ6 2873 aa3.77□□□□□ -1.81
CPS1-201ENST00000233072 KRTAP10-8P60410 259 aa3.76□□□□□ -1.81
CPS1-201ENST00000233072 H0YAA0 97 aa3.75□□□□□ -1.81
CPS1-201ENST00000233072 KRTAP13-3Q3SY46 172 aa3.75□□□□□ -1.81
CPS1-201ENST00000233072 SETD2Q9BYW2 2564 aaPredicted RBP3.75□□□□□ -1.81
CPS1-201ENST00000233072 CEP350Q5VT06 3117 aa3.73□□□□□ -1.81
CPS1-201ENST00000233072 ITPR3Q14573 2671 aa3.72□□□□□ -1.81
CPS1-201ENST00000233072 KMT2BQ9UMN6 2715 aaPredicted RBP3.7□□□□□ -1.82
CPS1-201ENST00000233072 HECTD1Q9ULT8 2610 aa3.69□□□□□ -1.82
CPS1-201ENST00000233072 KRTAP10-10P60014 251 aa3.69□□□□□ -1.82
CPS1-201ENST00000233072 A0A1B0GVY2 172 aa3.69□□□□□ -1.82
CPS1-201ENST00000233072 TNRC18O15417 2968 aaPredicted RBP3.67□□□□□ -1.82
CPS1-201ENST00000233072 UTRNP46939 3433 aa3.66□□□□□ -1.82
CPS1-201ENST00000233072 BPTFQ12830 3046 aa3.65□□□□□ -1.82
CPS1-201ENST00000233072 HELZ2Q9BYK8 2649 aaKnown RBP3.63□□□□□ -1.83
CPS1-201ENST00000233072 GOLGB1Q14789 3259 aaKnown RBP3.63□□□□□ -1.83
CPS1-201ENST00000233072 EPG5Q9HCE0 2579 aa3.62□□□□□ -1.83
CPS1-201ENST00000233072 ATRQ13535 2644 aa3.61□□□□□ -1.83
CPS1-201ENST00000233072 CENPFP49454 3210 aa3.6□□□□□ -1.83
CPS1-201ENST00000233072 KRTAP13-4Q3LI77 160 aa3.59□□□□□ -1.84
CPS1-201ENST00000233072 MGAM2Q2M2H8 2515 aa3.57□□□□□ -1.84
CPS1-201ENST00000233072 INE1O15225 51 aa3.56□□□□□ -1.84
CPS1-201ENST00000233072 HTTP42858 3142 aa3.56□□□□□ -1.84
CPS1-201ENST00000233072 PCNTO95613 3336 aa3.55□□□□□ -1.84
CPS1-201ENST00000233072 MAST4O15021 2626 aa3.54□□□□□ -1.84
CPS1-201ENST00000233072 USP24Q9UPU5 2620 aa3.54□□□□□ -1.84
CPS1-201ENST00000233072 DMBT1Q9UGM3 2413 aaPredicted RBP3.53□□□□□ -1.84
CPS1-201ENST00000233072 KRTAP12-2P59991 146 aa3.53□□□□□ -1.84
CPS1-201ENST00000233072 CHD9Q3L8U1 2897 aa3.52□□□□□ -1.85
CPS1-201ENST00000233072 FLG2Q5D862 2391 aaPredicted RBP3.51□□□□□ -1.85
CPS1-201ENST00000233072 CFAP46Q8IYW2 2715 aa3.49□□□□□ -1.85
CPS1-201ENST00000233072 TEP1Q99973 2627 aaKnown RBP3.48□□□□□ -1.85
CPS1-201ENST00000233072 CHD7Q9P2D1 2997 aa3.48□□□□□ -1.85
CPS1-201ENST00000233072 KRTAP12-1P59990 96 aa3.48□□□□□ -1.85
CPS1-201ENST00000233072 TRANK1O15050 2925 aa3.47□□□□□ -1.85
CPS1-201ENST00000233072 CENPEQ02224 2701 aa3.46□□□□□ -1.85
CPS1-201ENST00000233072 NBEAL1Q6ZS30 2694 aa3.44□□□□□ -1.86
CPS1-201ENST00000233072 ZNF292O60281 2723 aa3.43□□□□□ -1.86
CPS1-201ENST00000233072 UNC79Q9P2D8 2635 aa3.43□□□□□ -1.86
CPS1-201ENST00000233072 FLNBO75369 2602 aaKnown RBP3.42□□□□□ -1.86
CPS1-201ENST00000233072 DNAH12Q6ZR08 3092 aa3.42□□□□□ -1.86
CPS1-201ENST00000233072 AKAP13Q12802 2813 aa3.41□□□□□ -1.86
CPS1-201ENST00000233072 GCN1Q92616 2671 aaKnown RBP3.41□□□□□ -1.86
CPS1-201ENST00000233072 KRTAP15-1Q3LI76 137 aa3.4□□□□□ -1.86
CPS1-201ENST00000233072 KRTAP3-1Q9BYR8 98 aa3.4□□□□□ -1.86
CPS1-201ENST00000233072 IGSF10Q6WRI0 2623 aa3.4□□□□□ -1.86
CPS1-201ENST00000233072 CHD6Q8TD26 2715 aa3.4□□□□□ -1.86
CPS1-201ENST00000233072 NSD1Q96L73 2696 aaPredicted RBP3.4□□□□□ -1.87
CPS1-201ENST00000233072 ITPR2Q14571 2701 aa3.39□□□□□ -1.87
CPS1-201ENST00000233072 SETXQ7Z333 2677 aaKnown RBP3.39□□□□□ -1.87
CPS1-201ENST00000233072 SPTBN5Q9NRC6 3674 aaKnown RBP3.38□□□□□ -1.87
CPS1-201ENST00000233072 RANBP2P49792 3224 aaKnown RBP3.35□□□□□ -1.87
CPS1-201ENST00000233072 REV3LO60673 3130 aa3.35□□□□□ -1.87
CPS1-201ENST00000233072 STAB1Q9NY15 2570 aa3.35□□□□□ -1.87
CPS1-201ENST00000233072 BRCA2P51587 3418 aa3.35□□□□□ -1.87
CPS1-201ENST00000233072 PRUNE2Q8WUY3 3088 aa3.35□□□□□ -1.87
CPS1-201ENST00000233072 MKI67P46013 3256 aaKnown RBP3.34□□□□□ -1.87
CPS1-201ENST00000233072 TEX15Q9BXT5 2789 aa3.34□□□□□ -1.87
CPS1-201ENST00000233072 BAHCC1Q9P281 2608 aa3.34□□□□□ -1.88
CPS1-201ENST00000233072 KRTAP10-6P60371 365 aaPredicted RBP3.33□□□□□ -1.88
CPS1-201ENST00000233072 MUC3AQ02505 3323 aa3.33□□□□□ -1.88
CPS1-201ENST00000233072 C5orf42Q9H799 3197 aa3.32□□□□□ -1.88
CPS1-201ENST00000233072 ALMS1Q8TCU4 4167 aa3.32□□□□□ -1.88
CPS1-201ENST00000233072 KRTAP23-1A1A580 65 aa3.31□□□□□ -1.88
CPS1-201ENST00000233072 COL6A5A8TX70 2615 aa3.31□□□□□ -1.88
CPS1-201ENST00000233072 MAP1AP78559 2803 aaPredicted RBP3.3□□□□□ -1.88
CPS1-201ENST00000233072 LAMA2P24043 3122 aaKnown RBP3.3□□□□□ -1.88
CPS1-201ENST00000233072 STAB2Q8WWQ8 2551 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 84.9 ms