RNA–Protein interactions for RNA: ENST00000231484.3

PCDH12-201, Transcript of protocadherin 12, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDH12, Length 6,562 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH12-201ENST00000231484 UTRNP46939 3433 aa7.04□□□□□ -1.28
PCDH12-201ENST00000231484 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.04□□□□□ -1.28
PCDH12-201ENST00000231484 MTORP42345 2549 aa7.03□□□□□ -1.28
PCDH12-201ENST00000231484 KRTAP1-3Q8IUG1 177 aa7□□□□□ -1.29
PCDH12-201ENST00000231484 Q6ZSA8 131 aa6.98□□□□□ -1.29
PCDH12-201ENST00000231484 EPG5Q9HCE0 2579 aa6.97□□□□□ -1.29
PCDH12-201ENST00000231484 KRTAP4-16G5E9R7 235 aaPredicted RBP6.96□□□□□ -1.3
PCDH12-201ENST00000231484 FASNP49327 2511 aaKnown RBP6.95□□□□□ -1.3
PCDH12-201ENST00000231484 PLAC8Q9NZF1 115 aa6.94□□□□□ -1.3
PCDH12-201ENST00000231484 PANO1I0J062 215 aa6.94□□□□□ -1.3
PCDH12-201ENST00000231484 KRTAP1-1Q07627 177 aa6.94□□□□□ -1.3
PCDH12-201ENST00000231484 R4GN34 69 aa6.93□□□□□ -1.3
PCDH12-201ENST00000231484 M0R2T5 61 aa6.93□□□□□ -1.3
PCDH12-201ENST00000231484 C5orf42Q9H799 3197 aa6.92□□□□□ -1.3
PCDH12-201ENST00000231484 A8MUU9 505 aa6.86□□□□□ -1.31
PCDH12-201ENST00000231484 M0QZ58 72 aa6.83□□□□□ -1.32
PCDH12-201ENST00000231484 NOTCH2NLQ7Z3S9 236 aa6.83□□□□□ -1.32
PCDH12-201ENST00000231484 PLAC4Q8WY50 150 aa6.81□□□□□ -1.32
PCDH12-201ENST00000231484 PRRC2CQ9Y520 2896 aaKnown RBP6.8□□□□□ -1.32
PCDH12-201ENST00000231484 KRTAP11-1Q8IUC1 163 aa6.78□□□□□ -1.32
PCDH12-201ENST00000231484 SEC61BP60468 96 aaKnown RBP6.78□□□□□ -1.32
PCDH12-201ENST00000231484 BPTFQ12830 3046 aa6.76□□□□□ -1.33
PCDH12-201ENST00000231484 CEP350Q5VT06 3117 aa6.76□□□□□ -1.33
PCDH12-201ENST00000231484 FLNBO75369 2602 aaKnown RBP6.76□□□□□ -1.33
PCDH12-201ENST00000231484 C20orf166-AS1Q96NR2 134 aa6.76□□□□□ -1.33
PCDH12-201ENST00000231484 PCNTO95613 3336 aa6.75□□□□□ -1.33
PCDH12-201ENST00000231484 USP24Q9UPU5 2620 aa6.72□□□□□ -1.33
PCDH12-201ENST00000231484 KRTAP1-5Q9BYS1 174 aa6.71□□□□□ -1.33
PCDH12-201ENST00000231484 Q5VSD8 79 aa6.66□□□□□ -1.34
PCDH12-201ENST00000231484 HECTD1Q9ULT8 2610 aa6.66□□□□□ -1.34
PCDH12-201ENST00000231484 KRTAP10-2P60368 255 aa6.65□□□□□ -1.34
PCDH12-201ENST00000231484 KRTAP10-1P60331 282 aa6.64□□□□□ -1.35
PCDH12-201ENST00000231484 FLG2Q5D862 2391 aaPredicted RBP6.64□□□□□ -1.35
PCDH12-201ENST00000231484 MGAM2Q2M2H8 2515 aa6.62□□□□□ -1.35
PCDH12-201ENST00000231484 CHD7Q9P2D1 2997 aa6.62□□□□□ -1.35
PCDH12-201ENST00000231484 KRTAP7-1Q8IUC3 87 aa6.6□□□□□ -1.35
PCDH12-201ENST00000231484 MKI67P46013 3256 aaKnown RBP6.6□□□□□ -1.35
PCDH12-201ENST00000231484 FLNAP21333 2647 aaKnown RBP6.58□□□□□ -1.36
PCDH12-201ENST00000231484 C10orf95Q9H7T3 257 aa6.56□□□□□ -1.36
PCDH12-201ENST00000231484 CHD9Q3L8U1 2897 aa6.55□□□□□ -1.36
PCDH12-201ENST00000231484 ITPR3Q14573 2671 aa6.55□□□□□ -1.36
PCDH12-201ENST00000231484 CFAP54Q96N23 3096 aa6.54□□□□□ -1.36
PCDH12-201ENST00000231484 HTTP42858 3142 aa6.54□□□□□ -1.36
PCDH12-201ENST00000231484 RANBP2P49792 3224 aaKnown RBP6.52□□□□□ -1.36
PCDH12-201ENST00000231484 RPS29P62273 56 aaKnown RBP6.51□□□□□ -1.37
PCDH12-201ENST00000231484 KRTAP13-1Q8IUC0 172 aa6.51□□□□□ -1.37
PCDH12-201ENST00000231484 H0YAA0 97 aa6.51□□□□□ -1.37
PCDH12-201ENST00000231484 P0C880 135 aa6.48□□□□□ -1.37
PCDH12-201ENST00000231484 ATRQ13535 2644 aa6.48□□□□□ -1.37
PCDH12-201ENST00000231484 XIRP2A4UGR9 3374 aa6.46□□□□□ -1.37
PCDH12-201ENST00000231484 A0A0C4DFX4 3053 aa6.46□□□□□ -1.38
PCDH12-201ENST00000231484 PP632Q6XCG6 107 aa6.45□□□□□ -1.38
PCDH12-201ENST00000231484 ZNF292O60281 2723 aa6.45□□□□□ -1.38
PCDH12-201ENST00000231484 HELZ2Q9BYK8 2649 aaKnown RBP6.43□□□□□ -1.38
PCDH12-201ENST00000231484 MAST4O15021 2626 aa6.42□□□□□ -1.38
PCDH12-201ENST00000231484 TNP1P09430 55 aa6.42□□□□□ -1.38
PCDH12-201ENST00000231484 DMBT1Q9UGM3 2413 aaPredicted RBP6.4□□□□□ -1.38
PCDH12-201ENST00000231484 BRCA2P51587 3418 aa6.4□□□□□ -1.38
PCDH12-201ENST00000231484 KRTAP13-2Q52LG2 175 aa6.4□□□□□ -1.38
PCDH12-201ENST00000231484 TRIOO75962 3097 aa6.39□□□□□ -1.39
PCDH12-201ENST00000231484 TRANK1O15050 2925 aa6.39□□□□□ -1.39
PCDH12-201ENST00000231484 CFAP46Q8IYW2 2715 aa6.38□□□□□ -1.39
PCDH12-201ENST00000231484 CELSR3Q9NYQ7 3312 aa6.38□□□□□ -1.39
PCDH12-201ENST00000231484 DNAH14Q0VDD8 3507 aa6.37□□□□□ -1.39
PCDH12-201ENST00000231484 MGAQ8IWI9 3026 aa6.36□□□□□ -1.39
PCDH12-201ENST00000231484 LAMA2P24043 3122 aaKnown RBP6.36□□□□□ -1.39
PCDH12-201ENST00000231484 LAMA3Q16787 3333 aa6.35□□□□□ -1.39
PCDH12-201ENST00000231484 CHD6Q8TD26 2715 aa6.33□□□□□ -1.4
PCDH12-201ENST00000231484 Q6ZRN7 208 aaPredicted RBP6.33□□□□□ -1.4
PCDH12-201ENST00000231484 CENPEQ02224 2701 aa6.32□□□□□ -1.4
PCDH12-201ENST00000231484 AKAP13Q12802 2813 aa6.31□□□□□ -1.4
PCDH12-201ENST00000231484 CDH23Q9H251 3354 aa6.3□□□□□ -1.4
PCDH12-201ENST00000231484 UNC80Q8N2C7 3258 aa6.28□□□□□ -1.4
PCDH12-201ENST00000231484 FREM2Q5SZK8 3169 aa6.28□□□□□ -1.4
PCDH12-201ENST00000231484 STAB1Q9NY15 2570 aa6.27□□□□□ -1.41
PCDH12-201ENST00000231484 KRTAP10-8P60410 259 aa6.26□□□□□ -1.41
PCDH12-201ENST00000231484 TEX15Q9BXT5 2789 aa6.25□□□□□ -1.41
PCDH12-201ENST00000231484 WDFY4Q6ZS81 3184 aa6.25□□□□□ -1.41
PCDH12-201ENST00000231484 NBEAL1Q6ZS30 2694 aa6.24□□□□□ -1.41
PCDH12-201ENST00000231484 SZT2Q5T011 3432 aa6.23□□□□□ -1.41
PCDH12-201ENST00000231484 PRUNE2Q8WUY3 3088 aa6.23□□□□□ -1.41
PCDH12-201ENST00000231484 UNC79Q9P2D8 2635 aa6.23□□□□□ -1.41
PCDH12-201ENST00000231484 GCN1Q92616 2671 aaKnown RBP6.22□□□□□ -1.41
PCDH12-201ENST00000231484 IGSF10Q6WRI0 2623 aa6.18□□□□□ -1.42
PCDH12-201ENST00000231484 TEP1Q99973 2627 aaKnown RBP6.18□□□□□ -1.42
PCDH12-201ENST00000231484 COL6A3P12111 3177 aa6.17□□□□□ -1.42
PCDH12-201ENST00000231484 NBEAL2Q6ZNJ1 2754 aa6.16□□□□□ -1.42
PCDH12-201ENST00000231484 VPS13AQ96RL7 3174 aa6.16□□□□□ -1.42
PCDH12-201ENST00000231484 DSPP15924 2871 aaKnown RBP6.15□□□□□ -1.42
PCDH12-201ENST00000231484 FRYQ5TBA9 3013 aa6.15□□□□□ -1.43
PCDH12-201ENST00000231484 SETXQ7Z333 2677 aaKnown RBP6.14□□□□□ -1.43
PCDH12-201ENST00000231484 BAHCC1Q9P281 2608 aa6.11□□□□□ -1.43
PCDH12-201ENST00000231484 KRTAP13-3Q3SY46 172 aa6.1□□□□□ -1.43
PCDH12-201ENST00000231484 REV3LO60673 3130 aa6.09□□□□□ -1.43
PCDH12-201ENST00000231484 VCANP13611 3396 aa6.09□□□□□ -1.43
PCDH12-201ENST00000231484 A0A1B0GVY2 172 aa6.09□□□□□ -1.43
PCDH12-201ENST00000231484 TPRXLQ17RH7 258 aa6.08□□□□□ -1.44
PCDH12-201ENST00000231484 COL6A5A8TX70 2615 aa6.06□□□□□ -1.44
PCDH12-201ENST00000231484 STAB2Q8WWQ8 2551 aa6.05□□□□□ -1.44
PCDH12-201ENST00000231484 MAP1AP78559 2803 aaPredicted RBP6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms