RNA–Protein interactions for RNA: ENST00000222399.10

LAMB1-201, Transcript of laminin subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LAMB1, Length 5,725 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMB1-201ENST00000222399 KRTAP10-1P60331 282 aa8.16□□□□□ -1.1
LAMB1-201ENST00000222399 Q5VSD8 79 aa8.16□□□□□ -1.1
LAMB1-201ENST00000222399 SEC61BP60468 96 aaKnown RBP8.14□□□□□ -1.11
LAMB1-201ENST00000222399 CHD7Q9P2D1 2997 aa8.12□□□□□ -1.11
LAMB1-201ENST00000222399 KRTAP10-2P60368 255 aa8.12□□□□□ -1.11
LAMB1-201ENST00000222399 Q5XG85 94 aa8.12□□□□□ -1.11
LAMB1-201ENST00000222399 CYSTM1Q9H1C7 97 aa8.12□□□□□ -1.11
LAMB1-201ENST00000222399 MAST4O15021 2626 aa8.11□□□□□ -1.11
LAMB1-201ENST00000222399 FP248Q71RG6 208 aaPredicted RBP8.1□□□□□ -1.11
LAMB1-201ENST00000222399 Q5VV11 94 aa8.08□□□□□ -1.12
LAMB1-201ENST00000222399 KRTAP4-16G5E9R7 235 aaPredicted RBP8.08□□□□□ -1.12
LAMB1-201ENST00000222399 CFAP46Q8IYW2 2715 aa8.07□□□□□ -1.12
LAMB1-201ENST00000222399 PCNTO95613 3336 aa8.06□□□□□ -1.12
LAMB1-201ENST00000222399 R4GN34 69 aa8.06□□□□□ -1.12
LAMB1-201ENST00000222399 C5orf42Q9H799 3197 aa8.04□□□□□ -1.12
LAMB1-201ENST00000222399 Q6ZR54 194 aa8.04□□□□□ -1.12
LAMB1-201ENST00000222399 CHD9Q3L8U1 2897 aa8.03□□□□□ -1.12
LAMB1-201ENST00000222399 PANO1I0J062 215 aa8.02□□□□□ -1.13
LAMB1-201ENST00000222399 KRTAP29-1A8MX34 341 aaPredicted RBP7.96□□□□□ -1.13
LAMB1-201ENST00000222399 RPL37P61927 97 aaKnown RBP7.96□□□□□ -1.14
LAMB1-201ENST00000222399 PRAC1Q96KF2 57 aa7.96□□□□□ -1.14
LAMB1-201ENST00000222399 H1FX-AS1Q4G0G2 97 aa7.95□□□□□ -1.14
LAMB1-201ENST00000222399 OXTP01178 125 aa7.93□□□□□ -1.14
LAMB1-201ENST00000222399 A0A087X002 238 aa7.92□□□□□ -1.14
LAMB1-201ENST00000222399 M0QZ58 72 aa7.9□□□□□ -1.14
LAMB1-201ENST00000222399 ROMO1P60602 79 aa7.9□□□□□ -1.14
LAMB1-201ENST00000222399 ASB16-AS1Q495Z4 193 aa7.89□□□□□ -1.15
LAMB1-201ENST00000222399 RPS29P62273 56 aaKnown RBP7.88□□□□□ -1.15
LAMB1-201ENST00000222399 Q6ZRN7 208 aaPredicted RBP7.86□□□□□ -1.15
LAMB1-201ENST00000222399 CENPEQ02224 2701 aa7.85□□□□□ -1.15
LAMB1-201ENST00000222399 HTTP42858 3142 aa7.85□□□□□ -1.15
LAMB1-201ENST00000222399 TRANK1O15050 2925 aa7.84□□□□□ -1.15
LAMB1-201ENST00000222399 ZNF292O60281 2723 aa7.84□□□□□ -1.15
LAMB1-201ENST00000222399 ADM2Q7Z4H4 148 aa7.84□□□□□ -1.15
LAMB1-201ENST00000222399 STAB1Q9NY15 2570 aa7.84□□□□□ -1.15
LAMB1-201ENST00000222399 CHD6Q8TD26 2715 aa7.82□□□□□ -1.16
LAMB1-201ENST00000222399 KRTAP11-1Q8IUC1 163 aa7.82□□□□□ -1.16
LAMB1-201ENST00000222399 TEX15Q9BXT5 2789 aa7.81□□□□□ -1.16
LAMB1-201ENST00000222399 NOTCH2NLQ7Z3S9 236 aa7.81□□□□□ -1.16
LAMB1-201ENST00000222399 MGAQ8IWI9 3026 aa7.79□□□□□ -1.16
LAMB1-201ENST00000222399 MKI67P46013 3256 aaKnown RBP7.79□□□□□ -1.16
LAMB1-201ENST00000222399 PLAC4Q8WY50 150 aa7.78□□□□□ -1.16
LAMB1-201ENST00000222399 SETXQ7Z333 2677 aaKnown RBP7.78□□□□□ -1.16
LAMB1-201ENST00000222399 SPATA8Q6RVD6 105 aa7.77□□□□□ -1.16
LAMB1-201ENST00000222399 KRTAP7-1Q8IUC3 87 aa7.77□□□□□ -1.17
LAMB1-201ENST00000222399 AKAP13Q12802 2813 aa7.77□□□□□ -1.17
LAMB1-201ENST00000222399 NBEAL1Q6ZS30 2694 aa7.76□□□□□ -1.17
LAMB1-201ENST00000222399 A0A0A0MQY5 61 aa7.76□□□□□ -1.17
LAMB1-201ENST00000222399 RANBP2P49792 3224 aaKnown RBP7.75□□□□□ -1.17
LAMB1-201ENST00000222399 BRCA2P51587 3418 aa7.74□□□□□ -1.17
LAMB1-201ENST00000222399 LAMA3Q16787 3333 aa7.74□□□□□ -1.17
LAMB1-201ENST00000222399 TEP1Q99973 2627 aaKnown RBP7.73□□□□□ -1.17
LAMB1-201ENST00000222399 GCN1Q92616 2671 aaKnown RBP7.73□□□□□ -1.17
LAMB1-201ENST00000222399 KRTAP13-1Q8IUC0 172 aa7.73□□□□□ -1.17
LAMB1-201ENST00000222399 COL6A5A8TX70 2615 aa7.71□□□□□ -1.17
LAMB1-201ENST00000222399 KRTAP13-2Q52LG2 175 aa7.7□□□□□ -1.18
LAMB1-201ENST00000222399 UNC79Q9P2D8 2635 aa7.7□□□□□ -1.18
LAMB1-201ENST00000222399 CFAP54Q96N23 3096 aa7.67□□□□□ -1.18
LAMB1-201ENST00000222399 A0A0C4DFX4 3053 aa7.66□□□□□ -1.18
LAMB1-201ENST00000222399 IGSF10Q6WRI0 2623 aa7.66□□□□□ -1.18
LAMB1-201ENST00000222399 H3BS24 57 aa7.62□□□□□ -1.19
LAMB1-201ENST00000222399 KRTAP21-3Q3LHN1 58 aa7.61□□□□□ -1.19
LAMB1-201ENST00000222399 A8MUU9 505 aa7.61□□□□□ -1.19
LAMB1-201ENST00000222399 NOTCH1P46531 2555 aa7.6□□□□□ -1.19
LAMB1-201ENST00000222399 DMBT1Q9UGM3 2413 aaPredicted RBP7.56□□□□□ -1.2
LAMB1-201ENST00000222399 FLG2Q5D862 2391 aaPredicted RBP7.56□□□□□ -1.2
LAMB1-201ENST00000222399 NBEAL2Q6ZNJ1 2754 aa7.56□□□□□ -1.2
LAMB1-201ENST00000222399 UNC80Q8N2C7 3258 aa7.56□□□□□ -1.2
LAMB1-201ENST00000222399 BAHCC1Q9P281 2608 aa7.55□□□□□ -1.2
LAMB1-201ENST00000222399 PRUNE2Q8WUY3 3088 aa7.55□□□□□ -1.2
LAMB1-201ENST00000222399 A8MU10 97 aa7.54□□□□□ -1.2
LAMB1-201ENST00000222399 DSPP15924 2871 aaKnown RBP7.54□□□□□ -1.2
LAMB1-201ENST00000222399 CDH23Q9H251 3354 aa7.52□□□□□ -1.2
LAMB1-201ENST00000222399 WDFY4Q6ZS81 3184 aa7.52□□□□□ -1.2
LAMB1-201ENST00000222399 A6NN06 94 aa7.51□□□□□ -1.21
LAMB1-201ENST00000222399 ITPR2Q14571 2701 aa7.5□□□□□ -1.21
LAMB1-201ENST00000222399 KRTAP25-1Q3LHN0 102 aa7.5□□□□□ -1.21
LAMB1-201ENST00000222399 C20orf166-AS1Q96NR2 134 aa7.5□□□□□ -1.21
LAMB1-201ENST00000222399 NSD1Q96L73 2696 aaPredicted RBP7.5□□□□□ -1.21
LAMB1-201ENST00000222399 LAMA2P24043 3122 aaKnown RBP7.5□□□□□ -1.21
LAMB1-201ENST00000222399 UBR5O95071 2799 aaPredicted RBP7.48□□□□□ -1.21
LAMB1-201ENST00000222399 KMT2BQ9UMN6 2715 aaPredicted RBP7.48□□□□□ -1.21
LAMB1-201ENST00000222399 XIRP2A4UGR9 3374 aa7.47□□□□□ -1.21
LAMB1-201ENST00000222399 TRIOO75962 3097 aa7.44□□□□□ -1.22
LAMB1-201ENST00000222399 STAB2Q8WWQ8 2551 aa7.41□□□□□ -1.22
LAMB1-201ENST00000222399 MAP1AP78559 2803 aaPredicted RBP7.4□□□□□ -1.23
LAMB1-201ENST00000222399 FRYQ5TBA9 3013 aa7.39□□□□□ -1.23
LAMB1-201ENST00000222399 ITPR1Q14643 2758 aa7.37□□□□□ -1.23
LAMB1-201ENST00000222399 TNP1P09430 55 aa7.35□□□□□ -1.23
LAMB1-201ENST00000222399 KRTAP1-4P0C5Y4 121 aa7.34□□□□□ -1.23
LAMB1-201ENST00000222399 SZT2Q5T011 3432 aa7.33□□□□□ -1.24
LAMB1-201ENST00000222399 DNAH14Q0VDD8 3507 aa7.31□□□□□ -1.24
LAMB1-201ENST00000222399 VPS13AQ96RL7 3174 aa7.3□□□□□ -1.24
LAMB1-201ENST00000222399 CELSR3Q9NYQ7 3312 aa7.29□□□□□ -1.24
LAMB1-201ENST00000222399 XP32Q5T750 250 aa7.29□□□□□ -1.24
LAMB1-201ENST00000222399 KRTAP16-1A8MUX0 517 aa7.26□□□□□ -1.25
LAMB1-201ENST00000222399 UTP20O75691 2785 aaKnown RBP7.22□□□□□ -1.25
LAMB1-201ENST00000222399 HIVEP1P15822 2718 aa7.22□□□□□ -1.25
LAMB1-201ENST00000222399 FLNCQ14315 2725 aa7.21□□□□□ -1.25
LAMB1-201ENST00000222399 VCANP13611 3396 aa7.21□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 80.9 ms