RNA–Protein interactions for RNA: ENST00000217109.8

CSTF1-201, Transcript of cleavage stimulation factor subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSTF1, Length 4,290 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-201ENST00000217109 A0A0U1RQV1 116 aa6.25□□□□□ -1.41
CSTF1-201ENST00000217109 NBDYA0A0U1RRE5 68 aa6.24□□□□□ -1.41
CSTF1-201ENST00000217109 IGLV5-48A0A075B6I7 105 aa6.24□□□□□ -1.41
CSTF1-201ENST00000217109 PLA2G2DQ9UNK4 145 aa6.24□□□□□ -1.41
CSTF1-201ENST00000217109 IGHV6-1A0A0B4J1U7 121 aa6.22□□□□□ -1.41
CSTF1-201ENST00000217109 A0A1B0GW54 56 aa6.22□□□□□ -1.41
CSTF1-201ENST00000217109 H0Y9P7 68 aa6.21□□□□□ -1.42
CSTF1-201ENST00000217109 IGLV5-52A0A0A0MRZ9 124 aa6.2□□□□□ -1.42
CSTF1-201ENST00000217109 PCOTHQ58A44 107 aa6.2□□□□□ -1.42
CSTF1-201ENST00000217109 CIRBP-AS1Q8TBR5 109 aa6.19□□□□□ -1.42
CSTF1-201ENST00000217109 KRTAP1-5Q9BYS1 174 aa6.19□□□□□ -1.42
CSTF1-201ENST00000217109 ZNF706Q9Y5V0 76 aaPredicted RBP6.19□□□□□ -1.42
CSTF1-201ENST00000217109 MOBPQ13875 183 aa6.18□□□□□ -1.42
CSTF1-201ENST00000217109 IGLV5-37A0A075B6J1 123 aa6.18□□□□□ -1.42
CSTF1-201ENST00000217109 PSPHP1O15172 72 aa6.18□□□□□ -1.42
CSTF1-201ENST00000217109 C9orf163Q8N9P6 203 aa6.18□□□□□ -1.42
CSTF1-201ENST00000217109 APLNQ9ULZ1 77 aa6.17□□□□□ -1.42
CSTF1-201ENST00000217109 C1orf64Q8NEQ6 169 aa6.16□□□□□ -1.42
CSTF1-201ENST00000217109 OCR1Q9BZK8 76 aa6.16□□□□□ -1.42
CSTF1-201ENST00000217109 SPRR1AP35321 89 aa6.16□□□□□ -1.42
CSTF1-201ENST00000217109 CNBPP62633 177 aaKnown RBP6.16□□□□□ -1.42
CSTF1-201ENST00000217109 TENM2Q9NT68 2774 aa6.16□□□□□ -1.42
CSTF1-201ENST00000217109 C1orf134Q5TEV5 83 aa6.16□□□□□ -1.42
CSTF1-201ENST00000217109 ANAPC11Q9NYG5 84 aa6.16□□□□□ -1.42
CSTF1-201ENST00000217109 DSCR10P59022 87 aa6.15□□□□□ -1.42
CSTF1-201ENST00000217109 RTL8CO15255 209 aa6.15□□□□□ -1.43
CSTF1-201ENST00000217109 hDV103S1A0JD37 113 aa6.13□□□□□ -1.43
CSTF1-201ENST00000217109 SPRR4Q96PI1 79 aa6.13□□□□□ -1.43
CSTF1-201ENST00000217109 OXTP01178 125 aa6.13□□□□□ -1.43
CSTF1-201ENST00000217109 ANK3Q12955 4377 aaKnown RBP6.13□□□□□ -1.43
CSTF1-201ENST00000217109 C4orf48Q5BLP8 95 aa6.13□□□□□ -1.43
CSTF1-201ENST00000217109 A8MWP4 228 aa6.11□□□□□ -1.43
CSTF1-201ENST00000217109 KRTAP4-16G5E9R7 235 aaPredicted RBP6.11□□□□□ -1.43
CSTF1-201ENST00000217109 PRR15Q8IV56 129 aa6.11□□□□□ -1.43
CSTF1-201ENST00000217109 SPTSSBQ8NFR3 76 aa6.11□□□□□ -1.43
CSTF1-201ENST00000217109 RETNLBQ9BQ08 111 aa6.11□□□□□ -1.43
CSTF1-201ENST00000217109 CHKB-CPT1BH3BT56 60 aa6.11□□□□□ -1.43
CSTF1-201ENST00000217109 KRTAP7-1Q8IUC3 87 aa6.1□□□□□ -1.43
CSTF1-201ENST00000217109 A0A087WTM6 91 aa6.09□□□□□ -1.43
CSTF1-201ENST00000217109 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.09□□□□□ -1.43
CSTF1-201ENST00000217109 LINC00336Q6ZUF6 198 aa6.09□□□□□ -1.43
CSTF1-201ENST00000217109 TRAV22A0A0B4J277 110 aa6.08□□□□□ -1.44
CSTF1-201ENST00000217109 TNP2Q05952 138 aa6.08□□□□□ -1.44
CSTF1-201ENST00000217109 PSORS1C2Q9UIG4 136 aa6.07□□□□□ -1.44
CSTF1-201ENST00000217109 PRR15LQ9BU68 103 aa6.07□□□□□ -1.44
CSTF1-201ENST00000217109 V9GYY9 64 aa6.06□□□□□ -1.44
CSTF1-201ENST00000217109 PRO0628Q9UI54 55 aa6.06□□□□□ -1.44
CSTF1-201ENST00000217109 A6NED7 52 aa6.05□□□□□ -1.44
CSTF1-201ENST00000217109 Q5XG85 94 aa6.05□□□□□ -1.44
CSTF1-201ENST00000217109 PANO1I0J062 215 aa6.04□□□□□ -1.44
CSTF1-201ENST00000217109 AKAP9Q99996 3911 aa6.04□□□□□ -1.44
CSTF1-201ENST00000217109 KRTAP11-1Q8IUC1 163 aa6.03□□□□□ -1.44
CSTF1-201ENST00000217109 ZNF861PO60384 105 aa6.03□□□□□ -1.44
CSTF1-201ENST00000217109 FAM229BQ4G0N7 80 aa6.03□□□□□ -1.44
CSTF1-201ENST00000217109 FP248Q71RG6 208 aaPredicted RBP6.02□□□□□ -1.45
CSTF1-201ENST00000217109 TP53AIP1Q9HCN2 124 aa6.01□□□□□ -1.45
CSTF1-201ENST00000217109 C1orf195Q5TG92 126 aa6.01□□□□□ -1.45
CSTF1-201ENST00000217109 C8orf17Q9NRJ1 99 aa6.01□□□□□ -1.45
CSTF1-201ENST00000217109 A8MUN3 132 aa6.01□□□□□ -1.45
CSTF1-201ENST00000217109 TGP01266 2768 aa6□□□□□ -1.45
CSTF1-201ENST00000217109 H3BPC8 53 aa6□□□□□ -1.45
CSTF1-201ENST00000217109 SPACA4Q8TDM5 124 aa6□□□□□ -1.45
CSTF1-201ENST00000217109 SPAG11AQ6PDA7 123 aa5.99□□□□□ -1.45
CSTF1-201ENST00000217109 MRPL34Q9BQ48 92 aaKnown RBP5.98□□□□□ -1.45
CSTF1-201ENST00000217109 A0A1B0GVX0 72 aa5.98□□□□□ -1.45
CSTF1-201ENST00000217109 SRRM2Q9UQ35 2752 aaKnown RBP5.97□□□□□ -1.45
CSTF1-201ENST00000217109 IGLV8-61A0A075B6I0 122 aa5.97□□□□□ -1.45
CSTF1-201ENST00000217109 LINC00472Q9H8W2 130 aa5.96□□□□□ -1.45
CSTF1-201ENST00000217109 PMAIP1Q13794 54 aa5.96□□□□□ -1.46
CSTF1-201ENST00000217109 COA5Q86WW8 74 aa5.95□□□□□ -1.46
CSTF1-201ENST00000217109 IGKV2D-30A0A075B6S6 120 aa5.95□□□□□ -1.46
CSTF1-201ENST00000217109 IGLV7-43P04211 117 aa5.95□□□□□ -1.46
CSTF1-201ENST00000217109 IGKV2-30P06310 120 aa5.95□□□□□ -1.46
CSTF1-201ENST00000217109 SPRR1BP22528 89 aa5.95□□□□□ -1.46
CSTF1-201ENST00000217109 LIMD2Q9BT23 127 aa5.94□□□□□ -1.46
CSTF1-201ENST00000217109 MMP24-AS1A0A0U1RRL7 71 aa5.93□□□□□ -1.46
CSTF1-201ENST00000217109 LINC00313P59037 77 aa5.93□□□□□ -1.46
CSTF1-201ENST00000217109 SPINK1P00995 79 aa5.9□□□□□ -1.46
CSTF1-201ENST00000217109 PLA2G1BP04054 148 aaKnown RBP5.89□□□□□ -1.47
CSTF1-201ENST00000217109 SSBP3-AS1Q7Z2R9 100 aa5.89□□□□□ -1.47
CSTF1-201ENST00000217109 WWC2-AS2Q96NR7 200 aa5.89□□□□□ -1.47
CSTF1-201ENST00000217109 Q6ZRN7 208 aaPredicted RBP5.88□□□□□ -1.47
CSTF1-201ENST00000217109 TYMSOSQ8TAI1 123 aa5.88□□□□□ -1.47
CSTF1-201ENST00000217109 CYP4F30PQ9H0H9 118 aa5.88□□□□□ -1.47
CSTF1-201ENST00000217109 PLAC8Q9NZF1 115 aa5.88□□□□□ -1.47
CSTF1-201ENST00000217109 KRTAP29-1A8MX34 341 aaPredicted RBP5.88□□□□□ -1.47
CSTF1-201ENST00000217109 SPANXA2-OT1Q8N9U9 137 aa5.88□□□□□ -1.47
CSTF1-201ENST00000217109 LOC101927531A0A1B0GV80 90 aa5.87□□□□□ -1.47
CSTF1-201ENST00000217109 ACYP2P14621 99 aa5.86□□□□□ -1.47
CSTF1-201ENST00000217109 ZCCHC13Q8WW36 166 aaKnown RBP5.86□□□□□ -1.47
CSTF1-201ENST00000217109 SMR3BP02814 79 aaPredicted RBP5.85□□□□□ -1.47
CSTF1-201ENST00000217109 SEC61GP60059 68 aa5.85□□□□□ -1.47
CSTF1-201ENST00000217109 CSMD3Q7Z407 3707 aa5.84□□□□□ -1.47
CSTF1-201ENST00000217109 Q1T7F1 81 aa5.84□□□□□ -1.47
CSTF1-201ENST00000217109 Q96NJ1 140 aa5.84□□□□□ -1.47
CSTF1-201ENST00000217109 C8orf87E5RJ46 101 aa5.83□□□□□ -1.48
CSTF1-201ENST00000217109 FAM229AH3BQW9 127 aa5.83□□□□□ -1.48
CSTF1-201ENST00000217109 PRR26Q8N8Z3 221 aa5.83□□□□□ -1.48
CSTF1-201ENST00000217109 COL7A1Q02388 2944 aa5.83□□□□□ -1.48
CSTF1-201ENST00000217109 A0A087X002 238 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms