RNA–Protein interactions for RNA: ENST00000216513.4

SIX4-201, Transcript of SIX homeobox 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX4, Length 6,285 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-201ENST00000216513 BOD1L1Q8NFC6 3051 aa8.72□□□□□ -1.01
SIX4-201ENST00000216513 Q8N377 158 aa8.71□□□□□ -1.01
SIX4-201ENST00000216513 MRPL34Q9BQ48 92 aaKnown RBP8.71□□□□□ -1.01
SIX4-201ENST00000216513 LINC01600Q96MT4 127 aa8.71□□□□□ -1.02
SIX4-201ENST00000216513 KRTAP10-2P60368 255 aa8.7□□□□□ -1.02
SIX4-201ENST00000216513 PRO0628Q9UI54 55 aa8.7□□□□□ -1.02
SIX4-201ENST00000216513 KRTAP21-3Q3LHN1 58 aa8.7□□□□□ -1.02
SIX4-201ENST00000216513 MAP1AP78559 2803 aaPredicted RBP8.69□□□□□ -1.02
SIX4-201ENST00000216513 KRTAP10-1P60331 282 aa8.68□□□□□ -1.02
SIX4-201ENST00000216513 A8MUN3 132 aa8.68□□□□□ -1.02
SIX4-201ENST00000216513 COA5Q86WW8 74 aa8.67□□□□□ -1.02
SIX4-201ENST00000216513 A0A1B0GW54 56 aa8.66□□□□□ -1.02
SIX4-201ENST00000216513 KRTAP1-5Q9BYS1 174 aa8.65□□□□□ -1.02
SIX4-201ENST00000216513 LINC01554Q52M75 96 aa8.65□□□□□ -1.02
SIX4-201ENST00000216513 H3BPC8 53 aa8.65□□□□□ -1.03
SIX4-201ENST00000216513 Q8N1X5 172 aa8.65□□□□□ -1.03
SIX4-201ENST00000216513 LOC101927531A0A1B0GV80 90 aa8.64□□□□□ -1.03
SIX4-201ENST00000216513 A0A1B0GVX0 72 aa8.63□□□□□ -1.03
SIX4-201ENST00000216513 C8orf17Q9NRJ1 99 aa8.63□□□□□ -1.03
SIX4-201ENST00000216513 TNRC18O15417 2968 aaPredicted RBP8.63□□□□□ -1.03
SIX4-201ENST00000216513 PLAC8Q9NZF1 115 aa8.62□□□□□ -1.03
SIX4-201ENST00000216513 A0A0D9SG42 100 aa8.62□□□□□ -1.03
SIX4-201ENST00000216513 PRR15Q8IV56 129 aa8.59□□□□□ -1.03
SIX4-201ENST00000216513 NBEAL1Q6ZS30 2694 aa8.57□□□□□ -1.04
SIX4-201ENST00000216513 NOTCH1P46531 2555 aa8.56□□□□□ -1.04
SIX4-201ENST00000216513 KALRNO60229 2985 aa8.56□□□□□ -1.04
SIX4-201ENST00000216513 RPS28P62857 69 aaKnown RBP8.54□□□□□ -1.04
SIX4-201ENST00000216513 A0A1W2PNM2 257 aa8.53□□□□□ -1.04
SIX4-201ENST00000216513 UQCR11O14957 56 aa8.53□□□□□ -1.04
SIX4-201ENST00000216513 ITPR2Q14571 2701 aa8.52□□□□□ -1.05
SIX4-201ENST00000216513 ASPMQ8IZT6 3477 aa8.51□□□□□ -1.05
SIX4-201ENST00000216513 MIR22HGQ0VDD5 57 aa8.51□□□□□ -1.05
SIX4-201ENST00000216513 FAM229BQ4G0N7 80 aa8.51□□□□□ -1.05
SIX4-201ENST00000216513 IGLV5-48A0A075B6I7 105 aa8.5□□□□□ -1.05
SIX4-201ENST00000216513 Q8NDZ9 215 aa8.49□□□□□ -1.05
SIX4-201ENST00000216513 SEC61BP60468 96 aaKnown RBP8.49□□□□□ -1.05
SIX4-201ENST00000216513 DMXL2Q8TDJ6 3036 aa8.48□□□□□ -1.05
SIX4-201ENST00000216513 LRBAP50851 2863 aa8.48□□□□□ -1.05
SIX4-201ENST00000216513 CRIPTQ9P021 101 aa8.48□□□□□ -1.05
SIX4-201ENST00000216513 FAM104AQ969W3 186 aa8.47□□□□□ -1.05
SIX4-201ENST00000216513 UBR5O95071 2799 aaPredicted RBP8.45□□□□□ -1.06
SIX4-201ENST00000216513 NBEAQ8NFP9 2946 aa8.45□□□□□ -1.06
SIX4-201ENST00000216513 Q6ZR54 194 aa8.45□□□□□ -1.06
SIX4-201ENST00000216513 CD164Q04900 197 aa8.43□□□□□ -1.06
SIX4-201ENST00000216513 CRYBG3Q68DQ2 2970 aa8.43□□□□□ -1.06
SIX4-201ENST00000216513 OXTP01178 125 aa8.42□□□□□ -1.06
SIX4-201ENST00000216513 ATMQ13315 3056 aa8.42□□□□□ -1.06
SIX4-201ENST00000216513 ZFHX4Q86UP3 3567 aa8.42□□□□□ -1.06
SIX4-201ENST00000216513 ADGRG4Q8IZF6 3080 aa8.4□□□□□ -1.06
SIX4-201ENST00000216513 H7BZZ5 65 aa8.39□□□□□ -1.07
SIX4-201ENST00000216513 CYP4F30PQ9H0H9 118 aa8.39□□□□□ -1.07
SIX4-201ENST00000216513 COL12A1Q99715 3063 aa8.37□□□□□ -1.07
SIX4-201ENST00000216513 KLKP1Q107X0 134 aa8.37□□□□□ -1.07
SIX4-201ENST00000216513 HIVEP1P15822 2718 aa8.36□□□□□ -1.07
SIX4-201ENST00000216513 TACC2O95359 2948 aa8.36□□□□□ -1.07
SIX4-201ENST00000216513 LOC400499M0QZD8 3231 aa8.35□□□□□ -1.07
SIX4-201ENST00000216513 NBEAL2Q6ZNJ1 2754 aa8.35□□□□□ -1.07
SIX4-201ENST00000216513 FLNCQ14315 2725 aa8.34□□□□□ -1.07
SIX4-201ENST00000216513 ITPR1Q14643 2758 aa8.33□□□□□ -1.08
SIX4-201ENST00000216513 PANO1I0J062 215 aa8.33□□□□□ -1.08
SIX4-201ENST00000216513 STAB2Q8WWQ8 2551 aa8.31□□□□□ -1.08
SIX4-201ENST00000216513 DCHS1Q96JQ0 3298 aa8.31□□□□□ -1.08
SIX4-201ENST00000216513 CYSTM1Q9H1C7 97 aa8.29□□□□□ -1.08
SIX4-201ENST00000216513 CDC42SE1Q9NRR8 79 aa8.28□□□□□ -1.08
SIX4-201ENST00000216513 TENM4Q6N022 2769 aa8.27□□□□□ -1.09
SIX4-201ENST00000216513 ASH1LQ9NR48 2969 aaKnown RBP8.26□□□□□ -1.09
SIX4-201ENST00000216513 LAMA5O15230 3695 aa8.26□□□□□ -1.09
SIX4-201ENST00000216513 KRTAP26-1Q6PEX3 210 aa8.26□□□□□ -1.09
SIX4-201ENST00000216513 DMDP11532 3685 aa8.25□□□□□ -1.09
SIX4-201ENST00000216513 UTP20O75691 2785 aaKnown RBP8.25□□□□□ -1.09
SIX4-201ENST00000216513 Q8N9P0 234 aaPredicted RBP8.24□□□□□ -1.09
SIX4-201ENST00000216513 RELNP78509 3460 aa8.24□□□□□ -1.09
SIX4-201ENST00000216513 NSD1Q96L73 2696 aaPredicted RBP8.24□□□□□ -1.09
SIX4-201ENST00000216513 DMXL1Q9Y485 3027 aa8.24□□□□□ -1.09
SIX4-201ENST00000216513 ZCCHC13Q8WW36 166 aaKnown RBP8.23□□□□□ -1.09
SIX4-201ENST00000216513 CAMK2N1Q7Z7J9 78 aa8.22□□□□□ -1.09
SIX4-201ENST00000216513 S4R3F8 94 aa8.2□□□□□ -1.1
SIX4-201ENST00000216513 CSAG1Q6PB30 78 aa8.2□□□□□ -1.1
SIX4-201ENST00000216513 HRES1P13985 223 aa8.19□□□□□ -1.1
SIX4-201ENST00000216513 FP248Q71RG6 208 aaPredicted RBP8.18□□□□□ -1.1
SIX4-201ENST00000216513 KTN1-AS1Q86SY8 53 aa8.18□□□□□ -1.1
SIX4-201ENST00000216513 ZZEF1O43149 2961 aa8.18□□□□□ -1.1
SIX4-201ENST00000216513 SPRR1AP35321 89 aa8.17□□□□□ -1.1
SIX4-201ENST00000216513 OCR1Q9BZK8 76 aa8.17□□□□□ -1.1
SIX4-201ENST00000216513 CSMD1Q96PZ7 3565 aa8.17□□□□□ -1.1
SIX4-201ENST00000216513 SPANXA2-OT1Q8N9U9 137 aa8.17□□□□□ -1.1
SIX4-201ENST00000216513 SPINK7P58062 85 aa8.16□□□□□ -1.1
SIX4-201ENST00000216513 A0A087X002 238 aa8.16□□□□□ -1.1
SIX4-201ENST00000216513 Q6ZRN7 208 aaPredicted RBP8.16□□□□□ -1.1
SIX4-201ENST00000216513 LCA10Q71F78 164 aa8.14□□□□□ -1.11
SIX4-201ENST00000216513 APCP25054 2843 aa8.13□□□□□ -1.11
SIX4-201ENST00000216513 A0A1B0GU33 70 aa8.13□□□□□ -1.11
SIX4-201ENST00000216513 DMBT1Q9UGM3 2413 aaPredicted RBP8.12□□□□□ -1.11
SIX4-201ENST00000216513 KMT2BQ9UMN6 2715 aaPredicted RBP8.12□□□□□ -1.11
SIX4-201ENST00000216513 FLG2Q5D862 2391 aaPredicted RBP8.11□□□□□ -1.11
SIX4-201ENST00000216513 MMP24-AS1A0A0U1RRL7 71 aa8.09□□□□□ -1.11
SIX4-201ENST00000216513 PRAC1Q96KF2 57 aa8.09□□□□□ -1.11
SIX4-201ENST00000216513 LUZP6Q538Z0 58 aa8.08□□□□□ -1.12
SIX4-201ENST00000216513 Q1T7F1 81 aa8.07□□□□□ -1.12
SIX4-201ENST00000216513 SPRR1BP22528 89 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms