RNA–Protein interactions for RNA: ENST00000157600.7

LMCD1-201, Transcript of LIM and cysteine rich domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMCD1, Length 8,405 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1-201ENST00000157600 SPRR1AP35321 89 aa7.9□□□□□ -1.15
LMCD1-201ENST00000157600 NBEAL2Q6ZNJ1 2754 aa7.89□□□□□ -1.15
LMCD1-201ENST00000157600 APCP25054 2843 aa7.89□□□□□ -1.15
LMCD1-201ENST00000157600 UBR5O95071 2799 aaPredicted RBP7.87□□□□□ -1.15
LMCD1-201ENST00000157600 BAHCC1Q9P281 2608 aa7.86□□□□□ -1.15
LMCD1-201ENST00000157600 PLAC8Q9NZF1 115 aa7.85□□□□□ -1.15
LMCD1-201ENST00000157600 ANAPC11Q9NYG5 84 aa7.85□□□□□ -1.15
LMCD1-201ENST00000157600 SPRR1BP22528 89 aa7.85□□□□□ -1.15
LMCD1-201ENST00000157600 CASC10Q5T4H9 136 aa7.85□□□□□ -1.15
LMCD1-201ENST00000157600 A0A0G2JQZ4 141 aa7.84□□□□□ -1.15
LMCD1-201ENST00000157600 A0A1B0GU33 70 aa7.84□□□□□ -1.15
LMCD1-201ENST00000157600 VPS13AQ96RL7 3174 aa7.83□□□□□ -1.16
LMCD1-201ENST00000157600 Q8N1X5 172 aa7.83□□□□□ -1.16
LMCD1-201ENST00000157600 Q6ZSA8 131 aa7.81□□□□□ -1.16
LMCD1-201ENST00000157600 RANBP2P49792 3224 aaKnown RBP7.81□□□□□ -1.16
LMCD1-201ENST00000157600 DMAC1Q96GE9 116 aa7.8□□□□□ -1.16
LMCD1-201ENST00000157600 LINC01558Q9Y6Z2 57 aa7.8□□□□□ -1.16
LMCD1-201ENST00000157600 LINC00483Q53H64 154 aa7.79□□□□□ -1.16
LMCD1-201ENST00000157600 HRES1P13985 223 aa7.79□□□□□ -1.16
LMCD1-201ENST00000157600 SMR3BP02814 79 aaPredicted RBP7.79□□□□□ -1.16
LMCD1-201ENST00000157600 FLNCQ14315 2725 aa7.79□□□□□ -1.16
LMCD1-201ENST00000157600 UTP20O75691 2785 aaKnown RBP7.78□□□□□ -1.16
LMCD1-201ENST00000157600 FRYQ5TBA9 3013 aa7.78□□□□□ -1.16
LMCD1-201ENST00000157600 MMP24-AS1A0A0U1RRL7 71 aa7.78□□□□□ -1.16
LMCD1-201ENST00000157600 ZCCHC13Q8WW36 166 aaKnown RBP7.78□□□□□ -1.16
LMCD1-201ENST00000157600 ITPR1Q14643 2758 aa7.77□□□□□ -1.17
LMCD1-201ENST00000157600 LINC00472Q9H8W2 130 aa7.77□□□□□ -1.17
LMCD1-201ENST00000157600 TNP2Q05952 138 aa7.76□□□□□ -1.17
LMCD1-201ENST00000157600 PRR26Q8N8Z3 221 aa7.76□□□□□ -1.17
LMCD1-201ENST00000157600 Q8N9P0 234 aaPredicted RBP7.75□□□□□ -1.17
LMCD1-201ENST00000157600 A0A0D9SG42 100 aa7.75□□□□□ -1.17
LMCD1-201ENST00000157600 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.74□□□□□ -1.17
LMCD1-201ENST00000157600 CSAG1Q6PB30 78 aa7.72□□□□□ -1.17
LMCD1-201ENST00000157600 LINC01554Q52M75 96 aa7.72□□□□□ -1.17
LMCD1-201ENST00000157600 HTTP42858 3142 aa7.71□□□□□ -1.17
LMCD1-201ENST00000157600 ASB16-AS1Q495Z4 193 aa7.69□□□□□ -1.18
LMCD1-201ENST00000157600 CAMK2N1Q7Z7J9 78 aa7.69□□□□□ -1.18
LMCD1-201ENST00000157600 WDFY4Q6ZS81 3184 aa7.69□□□□□ -1.18
LMCD1-201ENST00000157600 FRYLO94915 3013 aa7.68□□□□□ -1.18
LMCD1-201ENST00000157600 S4R3F8 94 aa7.68□□□□□ -1.18
LMCD1-201ENST00000157600 TRIOO75962 3097 aa7.67□□□□□ -1.18
LMCD1-201ENST00000157600 PRUNE2Q8WUY3 3088 aa7.67□□□□□ -1.18
LMCD1-201ENST00000157600 Q5W150 140 aa7.66□□□□□ -1.18
LMCD1-201ENST00000157600 MKI67P46013 3256 aaKnown RBP7.65□□□□□ -1.18
LMCD1-201ENST00000157600 Q5XG85 94 aa7.65□□□□□ -1.18
LMCD1-201ENST00000157600 FP248Q71RG6 208 aaPredicted RBP7.62□□□□□ -1.19
LMCD1-201ENST00000157600 Q6ZR54 194 aa7.62□□□□□ -1.19
LMCD1-201ENST00000157600 Q5VV11 94 aa7.62□□□□□ -1.19
LMCD1-201ENST00000157600 SEC61BP60468 96 aaKnown RBP7.62□□□□□ -1.19
LMCD1-201ENST00000157600 NIPBLQ6KC79 2804 aaeCLIP7.61□□□□□ -1.19
LMCD1-201ENST00000157600 LAMA3Q16787 3333 aa7.61□□□□□ -1.19
LMCD1-201ENST00000157600 Q8NDZ9 215 aa7.6□□□□□ -1.19
LMCD1-201ENST00000157600 KALRNO60229 2985 aa7.59□□□□□ -1.19
LMCD1-201ENST00000157600 KRTAP26-1Q6PEX3 210 aa7.58□□□□□ -1.2
LMCD1-201ENST00000157600 SPINK7P58062 85 aa7.57□□□□□ -1.2
LMCD1-201ENST00000157600 R4GN34 69 aa7.55□□□□□ -1.2
LMCD1-201ENST00000157600 KRTAP4-16G5E9R7 235 aaPredicted RBP7.54□□□□□ -1.2
LMCD1-201ENST00000157600 LRBAP50851 2863 aa7.54□□□□□ -1.2
LMCD1-201ENST00000157600 RPS29P62273 56 aaKnown RBP7.52□□□□□ -1.2
LMCD1-201ENST00000157600 RPL37P61927 97 aaKnown RBP7.52□□□□□ -1.21
LMCD1-201ENST00000157600 A0A0A0MQY5 61 aa7.51□□□□□ -1.21
LMCD1-201ENST00000157600 M0R2T5 61 aa7.51□□□□□ -1.21
LMCD1-201ENST00000157600 HIVEP1P15822 2718 aa7.5□□□□□ -1.21
LMCD1-201ENST00000157600 ROMO1P60602 79 aa7.49□□□□□ -1.21
LMCD1-201ENST00000157600 CYSTM1Q9H1C7 97 aa7.49□□□□□ -1.21
LMCD1-201ENST00000157600 XIRP2A4UGR9 3374 aa7.48□□□□□ -1.21
LMCD1-201ENST00000157600 KRTAP1-5Q9BYS1 174 aa7.47□□□□□ -1.21
LMCD1-201ENST00000157600 KRTAP29-1A8MX34 341 aaPredicted RBP7.45□□□□□ -1.22
LMCD1-201ENST00000157600 ZZEF1O43149 2961 aa7.45□□□□□ -1.22
LMCD1-201ENST00000157600 H1FX-AS1Q4G0G2 97 aa7.44□□□□□ -1.22
LMCD1-201ENST00000157600 TACC2O95359 2948 aa7.44□□□□□ -1.22
LMCD1-201ENST00000157600 NBEAQ8NFP9 2946 aa7.44□□□□□ -1.22
LMCD1-201ENST00000157600 BRCA2P51587 3418 aa7.43□□□□□ -1.22
LMCD1-201ENST00000157600 ASH1LQ9NR48 2969 aaKnown RBP7.43□□□□□ -1.22
LMCD1-201ENST00000157600 LCE6AA0A183 80 aa7.42□□□□□ -1.22
LMCD1-201ENST00000157600 OXTP01178 125 aa7.41□□□□□ -1.22
LMCD1-201ENST00000157600 CELSR2Q9HCU4 2923 aa7.41□□□□□ -1.22
LMCD1-201ENST00000157600 Q5VSD8 79 aa7.41□□□□□ -1.22
LMCD1-201ENST00000157600 LAMA1P25391 3075 aa7.38□□□□□ -1.23
LMCD1-201ENST00000157600 PANO1I0J062 215 aa7.37□□□□□ -1.23
LMCD1-201ENST00000157600 DMXL2Q8TDJ6 3036 aa7.35□□□□□ -1.23
LMCD1-201ENST00000157600 KRTAP10-1P60331 282 aa7.35□□□□□ -1.23
LMCD1-201ENST00000157600 SPATA8Q6RVD6 105 aa7.34□□□□□ -1.23
LMCD1-201ENST00000157600 M0QZ58 72 aa7.32□□□□□ -1.24
LMCD1-201ENST00000157600 ZANQ9Y493 2812 aa7.32□□□□□ -1.24
LMCD1-201ENST00000157600 PRAC1Q96KF2 57 aa7.31□□□□□ -1.24
LMCD1-201ENST00000157600 TENM1Q9UKZ4 2725 aa7.31□□□□□ -1.24
LMCD1-201ENST00000157600 NF1P21359 2839 aa7.31□□□□□ -1.24
LMCD1-201ENST00000157600 CELSR3Q9NYQ7 3312 aa7.3□□□□□ -1.24
LMCD1-201ENST00000157600 ADGRG4Q8IZF6 3080 aa7.3□□□□□ -1.24
LMCD1-201ENST00000157600 COL12A1Q99715 3063 aa7.3□□□□□ -1.24
LMCD1-201ENST00000157600 A0A087X002 238 aa7.3□□□□□ -1.24
LMCD1-201ENST00000157600 KRTAP10-2P60368 255 aa7.29□□□□□ -1.24
LMCD1-201ENST00000157600 USP34Q70CQ2 3546 aa7.28□□□□□ -1.24
LMCD1-201ENST00000157600 BOD1L1Q8NFC6 3051 aa7.27□□□□□ -1.25
LMCD1-201ENST00000157600 H3BS24 57 aa7.26□□□□□ -1.25
LMCD1-201ENST00000157600 PLAC4Q8WY50 150 aa7.26□□□□□ -1.25
LMCD1-201ENST00000157600 CDH23Q9H251 3354 aa7.26□□□□□ -1.25
LMCD1-201ENST00000157600 FREM2Q5SZK8 3169 aa7.26□□□□□ -1.25
LMCD1-201ENST00000157600 ATMQ13315 3056 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 267.7 ms